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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
12391 O_BomoMSG21152_5prime_partial:A_BomoMSG_c26850_g1_i1
790bp
 E3_ubiquitin-protein_ligase_ZNF598_isoform_X1_[Bombyx_mori]
GO:0008270 F zinc ion binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
12392 O_BomoMSG21153_5prime_partial:A_BomoMSG_c26851_g1_i1
157bp
 differentially_expressed_in_FDCP_6,_partial_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0016020 C membrane
GO:0030175 C filopodium
GO:0042995 C cell projection
GO:0048471 C perinuclear region of cytoplasm
12393 O_BomoMSG21154_3prime_partial:A_BomoMSG_c26851_g1_i1
134bp
12394 O_BomoMSG21155_5prime_partial:A_BomoMSG_c26851_g1_i2
203bp
 differentially_expressed_in_FDCP_6,_partial_[Bombyx_mori]
12395 O_BomoMSG21156_complete:A_BomoMSG_c26851_g1_i2
170bp
12396 O_BomoMSG21157_complete:A_BomoMSG_c26851_g1_i3
542bp
 differentially_expressed_in_FDCP_6,_partial_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007204 P positive regulation of cytosolic calcium ion concentration
GO:0008064 P regulation of actin polymerization or depolymerization
GO:0016020 C membrane
GO:0016444 P somatic cell DNA recombination
GO:0030027 C lamellipodium
GO:0030835 P negative regulation of actin filament depolymerization
GO:0032233 P positive regulation of actin filament bundle assembly
GO:0032880 P regulation of protein localization
GO:0033633 P negative regulation of cell-cell adhesion mediated by integrin
GO:0042995 C cell projection
GO:0045190 P isotype switching
GO:0051017 P actin filament bundle assembly
GO:0060754 P positive regulation of mast cell chemotaxis
GO:1902309 P negative regulation of peptidyl-serine dephosphorylation
12397 O_BomoMSG21158_complete:A_BomoMSG_c26851_g1_i3
170bp
12398 O_BomoMSG21159_complete:A_BomoMSG_c26851_g1_i3
118bp
12399 O_BomoMSG2115_complete:A_BomoMSG_c10114_g1_i1
101bp
12400 O_BomoMSG21160_5prime_partial:A_BomoMSG_c26852_g1_i2
503bp
 cullin-associated_NEDD8-dissociated_protein_1_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0010265 P SCF complex assembly
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0017025 F TBP-class protein binding
GO:0030154 P cell differentiation
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0043086 P negative regulation of catalytic activity
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045899 P positive regulation of RNA polymerase II transcription preinitiation complex assembly
GO:0070062 C extracellular exosome
12401 O_BomoMSG21161_5prime_partial:A_BomoMSG_c26852_g1_i2
108bp
12402 O_BomoMSG21162_3prime_partial:A_BomoMSG_c26852_g1_i2
100bp
12403 O_BomoMSG21163_3prime_partial:A_BomoMSG_c26853_g1_i4
220bp
 ankyrin_repeat_domain-containing_protein_49_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0007283 P spermatogenesis
GO:0030154 P cell differentiation
GO:0045893 P positive regulation of transcription, DNA-templated
12404 O_BomoMSG21164_5prime_partial:A_BomoMSG_c26854_g1_i1
935bp
 E3_ubiquitin-protein_ligase_TRIP12_isoform_X4_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0009790 P embryo development
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046966 F thyroid hormone receptor binding
GO:1901315 P negative regulation of histone H2A K63-linked ubiquitination
GO:2000780 P negative regulation of double-strand break repair
12405 O_BomoMSG21165_complete:A_BomoMSG_c26854_g1_i1
176bp
12406 O_BomoMSG21166_complete:A_BomoMSG_c26854_g1_i1
125bp
12407 O_BomoMSG21167_complete:A_BomoMSG_c26854_g1_i1
125bp
12408 O_BomoMSG21168_complete:A_BomoMSG_c26854_g1_i2
834bp
 E3_ubiquitin-protein_ligase_TRIP12_isoform_X4_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0009790 P embryo development
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046966 F thyroid hormone receptor binding
GO:1901315 P negative regulation of histone H2A K63-linked ubiquitination
GO:2000780 P negative regulation of double-strand break repair
12409 O_BomoMSG21169_complete:A_BomoMSG_c26854_g1_i2
176bp
12410 O_BomoMSG2116_3prime_partial:A_BomoMSG_c10114_g1_i1
101bp
12411 O_BomoMSG21170_complete:A_BomoMSG_c26854_g1_i2
125bp
12412 O_BomoMSG21171_internal:A_BomoMSG_c26855_g1_i2
271bp
 protein_diaphanous_isoform_X6_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0000915 P actomyosin contractile ring assembly
GO:0003383 P apical constriction
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005912 C adherens junction
GO:0005938 C cell cortex
GO:0007015 P actin filament organization
GO:0007049 P cell cycle
GO:0007110 P meiosis I cytokinesis
GO:0007111 P meiosis II cytokinesis
GO:0007279 P pole cell formation
GO:0007283 P spermatogenesis
GO:0007349 P cellularization
GO:0007424 P open tracheal system development
GO:0007605 P sensory perception of sound
GO:0008104 P protein localization
GO:0009306 P protein secretion
GO:0012506 C vesicle membrane
GO:0016043 P cellular component organization
GO:0016324 C apical plasma membrane
GO:0016476 P regulation of embryonic cell shape
GO:0017048 F small GTPase binding
GO:0022008 P neurogenesis
GO:0030036 P actin cytoskeleton organization
GO:0030589 P pseudocleavage involved in syncytial blastoderm formation
GO:0030838 P positive regulation of actin filament polymerization
GO:0031532 P actin cytoskeleton reorganization
GO:0032154 C cleavage furrow
GO:0032507 P maintenance of protein location in cell
GO:0035011 P melanotic encapsulation of foreign target
GO:0035230 C cytoneme
GO:0043234 C protein-containing complex
GO:0045010 P actin nucleation
GO:0045177 C apical part of cell
GO:0045448 P mitotic cell cycle, embryonic
GO:0051225 P spindle assembly
GO:0051301 P cell division
GO:0051489 P regulation of filopodium assembly
GO:0090303 P positive regulation of wound healing
GO:0097320 P plasma membrane tubulation
12413 O_BomoMSG21172_internal:A_BomoMSG_c26855_g1_i4
239bp
 protein_diaphanous_isoform_X6_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0000915 P actomyosin contractile ring assembly
GO:0003383 P apical constriction
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005912 C adherens junction
GO:0005938 C cell cortex
GO:0007015 P actin filament organization
GO:0007049 P cell cycle
GO:0007110 P meiosis I cytokinesis
GO:0007111 P meiosis II cytokinesis
GO:0007279 P pole cell formation
GO:0007283 P spermatogenesis
GO:0007349 P cellularization
GO:0007424 P open tracheal system development
GO:0007605 P sensory perception of sound
GO:0008104 P protein localization
GO:0009306 P protein secretion
GO:0012506 C vesicle membrane
GO:0016043 P cellular component organization
GO:0016324 C apical plasma membrane
GO:0016476 P regulation of embryonic cell shape
GO:0017048 F small GTPase binding
GO:0022008 P neurogenesis
GO:0030036 P actin cytoskeleton organization
GO:0030589 P pseudocleavage involved in syncytial blastoderm formation
GO:0030838 P positive regulation of actin filament polymerization
GO:0031532 P actin cytoskeleton reorganization
GO:0032154 C cleavage furrow
GO:0032507 P maintenance of protein location in cell
GO:0035011 P melanotic encapsulation of foreign target
GO:0035230 C cytoneme
GO:0043234 C protein-containing complex
GO:0045010 P actin nucleation
GO:0045177 C apical part of cell
GO:0045448 P mitotic cell cycle, embryonic
GO:0051225 P spindle assembly
GO:0051301 P cell division
GO:0051489 P regulation of filopodium assembly
GO:0090303 P positive regulation of wound healing
GO:0097320 P plasma membrane tubulation
12414 O_BomoMSG21173_5prime_partial:A_BomoMSG_c26855_g2_i1
267bp
 protein_diaphanous_isoform_X3_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0000915 P actomyosin contractile ring assembly
GO:0003383 P apical constriction
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005912 C adherens junction
GO:0005938 C cell cortex
GO:0007015 P actin filament organization
GO:0007049 P cell cycle
GO:0007110 P meiosis I cytokinesis
GO:0007111 P meiosis II cytokinesis
GO:0007279 P pole cell formation
GO:0007283 P spermatogenesis
GO:0007349 P cellularization
GO:0007424 P open tracheal system development
GO:0007605 P sensory perception of sound
GO:0008104 P protein localization
GO:0009306 P protein secretion
GO:0012506 C vesicle membrane
GO:0016043 P cellular component organization
GO:0016324 C apical plasma membrane
GO:0016476 P regulation of embryonic cell shape
GO:0017048 F small GTPase binding
GO:0022008 P neurogenesis
GO:0030036 P actin cytoskeleton organization
GO:0030589 P pseudocleavage involved in syncytial blastoderm formation
GO:0030838 P positive regulation of actin filament polymerization
GO:0031532 P actin cytoskeleton reorganization
GO:0032154 C cleavage furrow
GO:0032507 P maintenance of protein location in cell
GO:0035011 P melanotic encapsulation of foreign target
GO:0035230 C cytoneme
GO:0043234 C protein-containing complex
GO:0045010 P actin nucleation
GO:0045177 C apical part of cell
GO:0045448 P mitotic cell cycle, embryonic
GO:0051225 P spindle assembly
GO:0051301 P cell division
GO:0051489 P regulation of filopodium assembly
GO:0090303 P positive regulation of wound healing
GO:0097320 P plasma membrane tubulation
12415 O_BomoMSG21174_internal:A_BomoMSG_c26855_g1_i5
114bp
 protein_diaphanous_isoform_X1_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0000915 P actomyosin contractile ring assembly
GO:0003383 P apical constriction
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005912 C adherens junction
GO:0005938 C cell cortex
GO:0007015 P actin filament organization
GO:0007049 P cell cycle
GO:0007110 P meiosis I cytokinesis
GO:0007111 P meiosis II cytokinesis
GO:0007279 P pole cell formation
GO:0007283 P spermatogenesis
GO:0007349 P cellularization
GO:0007424 P open tracheal system development
GO:0007605 P sensory perception of sound
GO:0008104 P protein localization
GO:0009306 P protein secretion
GO:0012506 C vesicle membrane
GO:0016043 P cellular component organization
GO:0016324 C apical plasma membrane
GO:0016476 P regulation of embryonic cell shape
GO:0017048 F small GTPase binding
GO:0022008 P neurogenesis
GO:0030036 P actin cytoskeleton organization
GO:0030589 P pseudocleavage involved in syncytial blastoderm formation
GO:0030838 P positive regulation of actin filament polymerization
GO:0031532 P actin cytoskeleton reorganization
GO:0032154 C cleavage furrow
GO:0032507 P maintenance of protein location in cell
GO:0035011 P melanotic encapsulation of foreign target
GO:0035230 C cytoneme
GO:0043234 C protein-containing complex
GO:0045010 P actin nucleation
GO:0045177 C apical part of cell
GO:0045448 P mitotic cell cycle, embryonic
GO:0051225 P spindle assembly
GO:0051301 P cell division
GO:0051489 P regulation of filopodium assembly
GO:0090303 P positive regulation of wound healing
GO:0097320 P plasma membrane tubulation
12416 O_BomoMSG21175_complete:A_BomoMSG_c26856_g1_i1
288bp
 protein_ABHD17B_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
12417 O_BomoMSG21176_5prime_partial:A_BomoMSG_c26856_g1_i1
204bp
12418 O_BomoMSG21177_complete:A_BomoMSG_c26856_g1_i1
142bp
12419 O_BomoMSG21178_complete:A_BomoMSG_c26856_g1_i1
105bp
 hypothetical_protein_RR48_05533_[Papilio_machaon]
12420 O_BomoMSG21179_5prime_partial:A_BomoMSG_c26856_g1_i2
204bp
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