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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
12181 O_BomoMSG20964_3prime_partial:A_BomoMSG_c26802_g1_i3
134bp
 hypothetical_protein_[Bacillus_thuringiensis_serovar_shandongiensis]
12182 O_BomoMSG20965_5prime_partial:A_BomoMSG_c26802_g1_i3
124bp
 muscle_glycogen_phosphorylase_[Bombyx_mori]
GO:0004645 F 1,4-alpha-oligoglucan phosphorylase activity
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0005980 P glycogen catabolic process
GO:0008184 F glycogen phosphorylase activity
GO:0008340 P determination of adult lifespan
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030170 F pyridoxal phosphate binding
GO:0042803 F protein homodimerization activity
GO:0043234 C protein-containing complex
GO:0045819 P positive regulation of glycogen catabolic process
GO:0045824 P negative regulation of innate immune response
GO:0050829 P defense response to Gram-negative bacterium
GO:0060361 P flight
12183 O_BomoMSG20966_complete:A_BomoMSG_c26803_g1_i1
171bp
 LOW_QUALITY_PROTEIN:_T-cell_immunomodulatory_protein_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0070062 C extracellular exosome
12184 O_BomoMSG20967_5prime_partial:A_BomoMSG_c26803_g1_i2
441bp
 LOW_QUALITY_PROTEIN:_T-cell_immunomodulatory_protein_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0070062 C extracellular exosome
12185 O_BomoMSG20968_complete:A_BomoMSG_c26803_g1_i3
590bp
 LOW_QUALITY_PROTEIN:_T-cell_immunomodulatory_protein_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0070062 C extracellular exosome
12186 O_BomoMSG20969_5prime_partial:A_BomoMSG_c26805_g1_i1
249bp
12187 O_BomoMSG2096_internal:A_BomoMSG_c10041_g1_i1
122bp
12188 O_BomoMSG20970_5prime_partial:A_BomoMSG_c26805_g1_i1
214bp
 axin_isoform_X2_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006909 P phagocytosis
GO:0007275 P multicellular organism development
GO:0007447 P imaginal disc pattern formation
GO:0007455 P eye-antennal disc morphogenesis
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007507 P heart development
GO:0008013 F beta-catenin binding
GO:0010941 P regulation of cell death
GO:0016055 P Wnt signaling pathway
GO:0019901 F protein kinase binding
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0035019 P somatic stem cell population maintenance
GO:0042594 P response to starvation
GO:0043547 P positive regulation of GTPase activity
GO:0048477 P oogenesis
12189 O_BomoMSG20971_complete:A_BomoMSG_c26805_g1_i1
115bp
12190 O_BomoMSG20972_5prime_partial:A_BomoMSG_c26806_g1_i2
502bp
 ankyrin_repeat_and_sterile_alpha_motif_domain-containing_protein_1B_isoform_X3_[Bombyx_mori]
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006929 P substrate-dependent cell migration
GO:0016322 P neuron remodeling
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0046875 F ephrin receptor binding
GO:0048013 P ephrin receptor signaling pathway
GO:1901187 P regulation of ephrin receptor signaling pathway
GO:2000059 P negative regulation of ubiquitin-dependent protein catabolic process
12191 O_BomoMSG20973_5prime_partial:A_BomoMSG_c26806_g1_i3
524bp
 ankyrin_repeat_and_sterile_alpha_motif_domain-containing_protein_1B_isoform_X3_[Bombyx_mori]
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006929 P substrate-dependent cell migration
GO:0016322 P neuron remodeling
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0046875 F ephrin receptor binding
GO:0048013 P ephrin receptor signaling pathway
GO:1901187 P regulation of ephrin receptor signaling pathway
GO:2000059 P negative regulation of ubiquitin-dependent protein catabolic process
12192 O_BomoMSG20974_complete:A_BomoMSG_c26806_g1_i4
589bp
 ankyrin_repeat_and_sterile_alpha_motif_domain-containing_protein_1B_isoform_X3_[Bombyx_mori]
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006929 P substrate-dependent cell migration
GO:0016322 P neuron remodeling
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0046875 F ephrin receptor binding
GO:0048013 P ephrin receptor signaling pathway
GO:1901187 P regulation of ephrin receptor signaling pathway
GO:2000059 P negative regulation of ubiquitin-dependent protein catabolic process
12193 O_BomoMSG20975_5prime_partial:A_BomoMSG_c26806_g1_i5
245bp
 ankyrin_repeat_and_sterile_alpha_motif_domain-containing_protein_1B_isoform_X3_[Bombyx_mori]
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006929 P substrate-dependent cell migration
GO:0016322 P neuron remodeling
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0046875 F ephrin receptor binding
GO:0048013 P ephrin receptor signaling pathway
GO:1901187 P regulation of ephrin receptor signaling pathway
GO:2000059 P negative regulation of ubiquitin-dependent protein catabolic process
12194 O_BomoMSG20976_complete:A_BomoMSG_c26806_g1_i6
607bp
 ankyrin_repeat_and_sterile_alpha_motif_domain-containing_protein_1B_isoform_X3_[Bombyx_mori]
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006929 P substrate-dependent cell migration
GO:0016322 P neuron remodeling
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0046875 F ephrin receptor binding
GO:0048013 P ephrin receptor signaling pathway
GO:1901187 P regulation of ephrin receptor signaling pathway
GO:2000059 P negative regulation of ubiquitin-dependent protein catabolic process
12195 O_BomoMSG20977_5prime_partial:A_BomoMSG_c26806_g1_i7
147bp
 ankyrin_repeat_and_sterile_alpha_motif_domain-containing_protein_1B_isoform_X3_[Bombyx_mori]
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006929 P substrate-dependent cell migration
GO:0016322 P neuron remodeling
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0046875 F ephrin receptor binding
GO:0048013 P ephrin receptor signaling pathway
GO:1901187 P regulation of ephrin receptor signaling pathway
GO:2000059 P negative regulation of ubiquitin-dependent protein catabolic process
12196 O_BomoMSG20978_complete:A_BomoMSG_c26807_g1_i2
581bp
 X-ray_repair_cross-complementing_protein_6_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000723 P telomere maintenance
GO:0000784 C chromosome, telomeric region
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006310 P DNA recombination
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016829 F lyase activity
GO:0032508 P DNA duplex unwinding
GO:0042162 F telomeric DNA binding
GO:0043564 C Ku70:Ku80 complex
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0051575 F 5'-deoxyribose-5-phosphate lyase activity
GO:0070419 C nonhomologous end joining complex
GO:0071480 P cellular response to gamma radiation
GO:0071481 P cellular response to X-ray
12197 O_BomoMSG20979_complete:A_BomoMSG_c26807_g1_i2
114bp
12198 O_BomoMSG2097_5prime_partial:A_BomoMSG_c10041_g1_i1
117bp
12199 O_BomoMSG20980_3prime_partial:A_BomoMSG_c26808_g1_i2
408bp
 mesoderm_induction_early_response_protein_1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0004871 F obsolete signal transducer activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007165 P signal transduction
GO:0017053 C transcription repressor complex
GO:0031937 P obsolete positive regulation of chromatin silencing
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
12200 O_BomoMSG20981_internal:A_BomoMSG_c26808_g1_i3
153bp
 mesoderm_induction_early_response_protein_1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0004871 F obsolete signal transducer activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007165 P signal transduction
GO:0017053 C transcription repressor complex
GO:0031937 P obsolete positive regulation of chromatin silencing
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
12201 O_BomoMSG20982_complete:A_BomoMSG_c26809_g1_i1
530bp
 uncharacterized_protein_LOC101746030_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
12202 O_BomoMSG20983_complete:A_BomoMSG_c26809_g1_i1
116bp
12203 O_BomoMSG20984_5prime_partial:A_BomoMSG_c26809_g1_i2
122bp
 PREDICTED:_uncharacterized_protein_LOC106136115_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
12204 O_BomoMSG20985_5prime_partial:A_BomoMSG_c26809_g1_i2
105bp
12205 O_BomoMSG20986_3prime_partial:A_BomoMSG_c26809_g1_i3
434bp
 uncharacterized_protein_LOC101746030_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
12206 O_BomoMSG20987_complete:A_BomoMSG_c26809_g1_i3
116bp
12207 O_BomoMSG20988_internal:A_BomoMSG_c26809_g1_i4
383bp
 uncharacterized_protein_LOC101746030_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
12208 O_BomoMSG20989_complete:A_BomoMSG_c26809_g1_i4
116bp
12209 O_BomoMSG2098_complete:A_BomoMSG_c10043_g1_i1
214bp
 GTP-binding_nuclear_protein_Ran_[Bombyx_mori]
GO:0000054 P ribosomal subunit export from nucleus
GO:0000132 P establishment of mitotic spindle orientation
GO:0000166 F nucleotide binding
GO:0000212 P meiotic spindle organization
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005875 C microtubule associated complex
GO:0005880 C nuclear microtubule
GO:0005938 C cell cortex
GO:0006606 P protein import into nucleus
GO:0006611 P protein export from nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006913 P nucleocytoplasmic transport
GO:0007015 P actin filament organization
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0007346 P regulation of mitotic cell cycle
GO:0008152 P metabolic process
GO:0008360 P regulation of cell shape
GO:0009267 P cellular response to starvation
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0032880 P regulation of protein localization
GO:0048812 P neuron projection morphogenesis
GO:0051301 P cell division
GO:0072686 C mitotic spindle
12210 O_BomoMSG20990_5prime_partial:A_BomoMSG_c26810_g2_i1
268bp
 PREDICTED:_uncharacterized_protein_LOC106720295_[Papilio_machaon]
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