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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
11971 O_BomoMSG20775_complete:A_BomoMSG_c26768_g2_i1
105bp
11972 O_BomoMSG20776_internal:A_BomoMSG_c26768_g1_i3
2398bp
 basement_membrane-specific_heparan_sulfate_proteoglycan_core_protein-like_isoform_X2_[Helicoverpa_armigera]
GO:0001523 P retinoid metabolic process
GO:0001525 P angiogenesis
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0005796 C Golgi lumen
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0006027 P glycosaminoglycan catabolic process
GO:0008022 F protein C-terminus binding
GO:0022617 P extracellular matrix disassembly
GO:0030198 P extracellular matrix organization
GO:0030203 P glycosaminoglycan metabolic process
GO:0031012 C extracellular matrix
GO:0042157 P lipoprotein metabolic process
GO:0043202 C lysosomal lumen
GO:0044267 P cellular protein metabolic process
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
11973 O_BomoMSG20777_complete:A_BomoMSG_c26768_g1_i3
135bp
11974 O_BomoMSG20778_complete:A_BomoMSG_c26768_g1_i3
130bp
11975 O_BomoMSG20779_complete:A_BomoMSG_c26768_g1_i3
129bp
11976 O_BomoMSG2077_complete:A_BomoMSG_c10017_g1_i1
125bp
 gloverin_2_isoform_X1_[Bombyx_mori]
GO:0002376 P immune system process
GO:0005576 C extracellular region
GO:0042742 P defense response to bacterium
GO:0045087 P innate immune response
11977 O_BomoMSG20780_complete:A_BomoMSG_c26768_g1_i3
119bp
11978 O_BomoMSG20781_5prime_partial:A_BomoMSG_c26768_g1_i4
3192bp
 basement_membrane-specific_heparan_sulfate_proteoglycan_core_protein-like_isoform_X3_[Bombyx_mori]
GO:0001523 P retinoid metabolic process
GO:0001525 P angiogenesis
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0005796 C Golgi lumen
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0006027 P glycosaminoglycan catabolic process
GO:0008022 F protein C-terminus binding
GO:0022617 P extracellular matrix disassembly
GO:0030198 P extracellular matrix organization
GO:0030203 P glycosaminoglycan metabolic process
GO:0031012 C extracellular matrix
GO:0042157 P lipoprotein metabolic process
GO:0043202 C lysosomal lumen
GO:0044267 P cellular protein metabolic process
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
11979 O_BomoMSG20782_complete:A_BomoMSG_c26768_g1_i4
135bp
11980 O_BomoMSG20783_complete:A_BomoMSG_c26768_g1_i4
130bp
11981 O_BomoMSG20784_complete:A_BomoMSG_c26768_g1_i4
130bp
11982 O_BomoMSG20785_complete:A_BomoMSG_c26768_g1_i4
129bp
11983 O_BomoMSG20786_complete:A_BomoMSG_c26768_g1_i4
119bp
11984 O_BomoMSG20787_complete:A_BomoMSG_c26768_g1_i4
117bp
11985 O_BomoMSG20788_complete:A_BomoMSG_c26768_g1_i4
113bp
11986 O_BomoMSG20789_5prime_partial:A_BomoMSG_c26768_g1_i5
3133bp
 basement_membrane-specific_heparan_sulfate_proteoglycan_core_protein-like_isoform_X4_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0001958 P endochondral ossification
GO:0002020 F protease binding
GO:0002062 P chondrocyte differentiation
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005605 C basement membrane
GO:0005615 C extracellular space
GO:0005796 C Golgi lumen
GO:0005925 C focal adhesion
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0007420 P brain development
GO:0008022 F protein C-terminus binding
GO:0008104 P protein localization
GO:0030198 P extracellular matrix organization
GO:0031012 C extracellular matrix
GO:0046872 F metal ion binding
GO:0048704 P embryonic skeletal system morphogenesis
GO:0048738 P cardiac muscle tissue development
GO:0060351 P cartilage development involved in endochondral bone morphogenesis
GO:0070062 C extracellular exosome
11987 O_BomoMSG2078_internal:A_BomoMSG_c10018_g1_i1
133bp
 PREDICTED:_piggyBac_transposable_element-derived_protein_4-like_[Amyelois_transitella]
11988 O_BomoMSG20790_complete:A_BomoMSG_c26768_g1_i5
168bp
11989 O_BomoMSG20791_complete:A_BomoMSG_c26768_g1_i5
135bp
11990 O_BomoMSG20792_complete:A_BomoMSG_c26768_g1_i5
130bp
11991 O_BomoMSG20793_complete:A_BomoMSG_c26768_g1_i5
130bp
11992 O_BomoMSG20794_complete:A_BomoMSG_c26768_g1_i5
129bp
11993 O_BomoMSG20795_complete:A_BomoMSG_c26768_g1_i5
119bp
11994 O_BomoMSG20796_complete:A_BomoMSG_c26768_g1_i5
113bp
11995 O_BomoMSG20797_5prime_partial:A_BomoMSG_c26768_g1_i6
1563bp
 basement_membrane-specific_heparan_sulfate_proteoglycan_core_protein-like_isoform_X2_[Bombyx_mori]
GO:0001523 P retinoid metabolic process
GO:0001525 P angiogenesis
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0005796 C Golgi lumen
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0006027 P glycosaminoglycan catabolic process
GO:0008022 F protein C-terminus binding
GO:0022617 P extracellular matrix disassembly
GO:0030198 P extracellular matrix organization
GO:0030203 P glycosaminoglycan metabolic process
GO:0031012 C extracellular matrix
GO:0042157 P lipoprotein metabolic process
GO:0043202 C lysosomal lumen
GO:0044267 P cellular protein metabolic process
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
11996 O_BomoMSG20798_complete:A_BomoMSG_c26768_g1_i6
149bp
11997 O_BomoMSG20799_complete:A_BomoMSG_c26768_g1_i6
135bp
11998 O_BomoMSG2079_internal:A_BomoMSG_c10019_g1_i1
103bp
 PREDICTED:_uncharacterized_protein_LOC106131099_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0046872 F metal ion binding
11999 O_BomoMSG207_5prime_partial:A_BomoMSG_c933_g1_i2
136bp
12000 O_BomoMSG20800_complete:A_BomoMSG_c26768_g1_i6
130bp
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