Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
11911	O_BomoMSG20720_3prime_partial:A_BomoMSG_c26760_g1_i2 681bp	Bomo_Chr24	uncharacterized_protein_LOC101737485_isoform_X2_[Bombyx_mori]
11912	O_BomoMSG20721_5prime_partial:A_BomoMSG_c26761_g1_i1 172bp	Bomo_Chr28	uridine_phosphorylase_1_isoform_X2_[Bombyx_mori]	GO:0003824 F catalytic activity GO:0004850 F uridine phosphorylase activity GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006139 P nucleobase-containing compound metabolic process GO:0006218 P uridine catabolic process GO:0006220 P pyrimidine nucleotide metabolic process GO:0009116 P nucleoside metabolic process GO:0009166 P nucleotide catabolic process GO:0016740 F transferase activity GO:0016757 F glycosyltransferase activity GO:0016763 F pentosyltransferase activity GO:0042149 P cellular response to glucose starvation GO:0043097 P pyrimidine nucleoside salvage GO:0044206 P UMP salvage GO:0046108 P uridine metabolic process GO:0046135 P pyrimidine nucleoside catabolic process
11913	O_BomoMSG20722_3prime_partial:A_BomoMSG_c26761_g2_i1 165bp	Bomo_Chr28	uridine_phosphorylase_1_isoform_X2_[Bombyx_mori]	GO:0003824 F catalytic activity GO:0004850 F uridine phosphorylase activity GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006139 P nucleobase-containing compound metabolic process GO:0006218 P uridine catabolic process GO:0006220 P pyrimidine nucleotide metabolic process GO:0009116 P nucleoside metabolic process GO:0009166 P nucleotide catabolic process GO:0016740 F transferase activity GO:0016757 F glycosyltransferase activity GO:0016763 F pentosyltransferase activity GO:0042149 P cellular response to glucose starvation GO:0043097 P pyrimidine nucleoside salvage GO:0044206 P UMP salvage GO:0046108 P uridine metabolic process GO:0046135 P pyrimidine nucleoside catabolic process
11914	O_BomoMSG20723_3prime_partial:A_BomoMSG_c26761_g2_i1 110bp	Bomo_Chr28
11915	O_BomoMSG20724_3prime_partial:A_BomoMSG_c26762_g1_i1 443bp	Bomo_Chr20	chondroitin_sulfate_synthase_2_[Bombyx_mori]	GO:0000139 C Golgi membrane GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0005739 C mitochondrion GO:0005759 C mitochondrial matrix GO:0005794 C Golgi apparatus GO:0005829 C cytosol GO:0008376 F acetylgalactosaminyltransferase activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016740 F transferase activity GO:0016757 F glycosyltransferase activity GO:0030206 P chondroitin sulfate biosynthetic process GO:0032580 C Golgi cisterna membrane GO:0046872 F metal ion binding GO:0047238 F glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity GO:0050510 F N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity
11916	O_BomoMSG20725_3prime_partial:A_BomoMSG_c26762_g1_i5 693bp	Bomo_Chr20	chondroitin_sulfate_synthase_2_[Bombyx_mori]	GO:0000139 C Golgi membrane GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0005739 C mitochondrion GO:0005759 C mitochondrial matrix GO:0005794 C Golgi apparatus GO:0005829 C cytosol GO:0008376 F acetylgalactosaminyltransferase activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016740 F transferase activity GO:0016757 F glycosyltransferase activity GO:0030206 P chondroitin sulfate biosynthetic process GO:0032580 C Golgi cisterna membrane GO:0046872 F metal ion binding GO:0047238 F glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity GO:0050510 F N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity
11917	O_BomoMSG20726_5prime_partial:A_BomoMSG_c26762_g1_i5 316bp	Bomo_Chr20
11918	O_BomoMSG20727_complete:A_BomoMSG_c26762_g1_i5 146bp	Bomo_Chr20
11919	O_BomoMSG20728_internal:A_BomoMSG_c26762_g1_i6 159bp	Bomo_Chr20
11920	O_BomoMSG20729_internal:A_BomoMSG_c26762_g1_i6 159bp	Bomo_Chr20
11921	O_BomoMSG2072_5prime_partial:A_BomoMSG_c9990_g1_i1 205bp	Bomo_Chr14	fibrohexamerin-like_[Bombyx_mori]	GO:0005198 F structural molecule activity GO:0005576 C extracellular region
11922	O_BomoMSG20730_internal:A_BomoMSG_c26762_g1_i6 159bp	Bomo_Chr20	chondroitin_sulfate_synthase_2_[Bombyx_mori]	GO:0000139 C Golgi membrane GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0005739 C mitochondrion GO:0005759 C mitochondrial matrix GO:0005794 C Golgi apparatus GO:0005829 C cytosol GO:0008376 F acetylgalactosaminyltransferase activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016740 F transferase activity GO:0016757 F glycosyltransferase activity GO:0030206 P chondroitin sulfate biosynthetic process GO:0032580 C Golgi cisterna membrane GO:0046872 F metal ion binding GO:0047238 F glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity GO:0050510 F N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity
11923	O_BomoMSG20731_complete:A_BomoMSG_c26763_g1_i2 252bp	Bomo_Chr11	enoyl-CoA_delta_isomerase_2,_mitochondrial_[Bombyx_mori]	GO:0000062 F fatty-acyl-CoA binding GO:0003824 F catalytic activity GO:0004165 F dodecenoyl-CoA delta-isomerase activity GO:0005102 F signaling receptor binding GO:0005654 C nucleoplasm GO:0005739 C mitochondrion GO:0005777 C peroxisome GO:0005782 C peroxisomal matrix GO:0006635 P fatty acid beta-oxidation GO:0008152 P metabolic process GO:0009062 P fatty acid catabolic process GO:0016020 C membrane GO:0016853 F isomerase activity GO:0016863 F intramolecular oxidoreductase activity, transposing C=C bonds GO:0043231 C intracellular membrane-bounded organelle GO:0044255 P cellular lipid metabolic process
11924	O_BomoMSG20732_complete:A_BomoMSG_c26763_g1_i2 114bp	Bomo_Chr11
11925	O_BomoMSG20733_5prime_partial:A_BomoMSG_c26764_g1_i2 391bp	Bomo_Chr9	uncharacterized_protein_LOC101744958_isoform_X3_[Bombyx_mori]
11926	O_BomoMSG20734_5prime_partial:A_BomoMSG_c26764_g1_i3 400bp	Bomo_Chr9	uncharacterized_protein_LOC101744958_isoform_X2_[Bombyx_mori]
11927	O_BomoMSG20735_5prime_partial:A_BomoMSG_c26765_g4_i1 343bp	Bomo_Chr24	PREDICTED:_uncharacterized_protein_LOC105385776,_partial_[Plutella_xylostella]	GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003693 F P-element binding GO:0004803 F transposase activity GO:0006310 P DNA recombination GO:0006313 P transposition, DNA-mediated GO:0015074 P DNA integration GO:0016740 F transferase activity GO:0046872 F metal ion binding
11928	O_BomoMSG20736_5prime_partial:A_BomoMSG_c26765_g4_i2 509bp	Bomo_Chr5	PREDICTED:_uncharacterized_protein_LOC105385776,_partial_[Plutella_xylostella]	GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003693 F P-element binding GO:0004803 F transposase activity GO:0006310 P DNA recombination GO:0006313 P transposition, DNA-mediated GO:0015074 P DNA integration GO:0016740 F transferase activity GO:0046872 F metal ion binding
11929	O_BomoMSG20737_5prime_partial:A_BomoMSG_c26766_g1_i2 540bp	Bomo_Chr23	organic_cation_transporter_protein_isoform_X1_[Bombyx_mori]	GO:0005887 C integral component of plasma membrane GO:0006810 P transport GO:0006811 P ion transport GO:0006915 P apoptotic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0022857 F transmembrane transporter activity GO:0022891 F transmembrane transporter activity GO:0055085 P transmembrane transport
11930	O_BomoMSG20738_complete:A_BomoMSG_c26766_g1_i2 185bp	Bomo_Chr23
11931	O_BomoMSG20739_complete:A_BomoMSG_c26766_g1_i2 150bp	Bomo_Chr23
11932	O_BomoMSG2073_internal:A_BomoMSG_c9993_g1_i1 126bp	Bomo_Chr24	tRNA_(cytosine(34)-C(5))-methyltransferase_[Papilio_machaon]
11933	O_BomoMSG20740_complete:A_BomoMSG_c26766_g1_i2 109bp	Bomo_Chr23
11934	O_BomoMSG20741_complete:A_BomoMSG_c26766_g1_i3 591bp	Bomo_Chr23	organic_cation_transporter_protein_isoform_X1_[Bombyx_mori]	GO:0005887 C integral component of plasma membrane GO:0006810 P transport GO:0006811 P ion transport GO:0006915 P apoptotic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0022857 F transmembrane transporter activity GO:0022891 F transmembrane transporter activity GO:0055085 P transmembrane transport
11935	O_BomoMSG20742_complete:A_BomoMSG_c26766_g1_i3 185bp	Bomo_Chr23
11936	O_BomoMSG20743_complete:A_BomoMSG_c26766_g1_i3 150bp	Bomo_Chr23
11937	O_BomoMSG20744_complete:A_BomoMSG_c26766_g1_i3 125bp	Bomo_Chr23
11938	O_BomoMSG20745_complete:A_BomoMSG_c26766_g1_i3 109bp	Bomo_Chr23
11939	O_BomoMSG20746_complete:A_BomoMSG_c26767_g1_i1 210bp	Bomo_Chr3	non-structural_maintenance_of_chromosomes_element_3_homolog_[Bombyx_mori]	GO:0000781 C chromosome, telomeric region GO:0005515 F protein binding GO:0005634 C nucleus GO:0005694 C chromosome GO:0005737 C cytoplasm GO:0006281 P DNA repair GO:0006310 P DNA recombination GO:0006355 P regulation of transcription, DNA-templated GO:0006974 P cellular response to DNA damage stimulus GO:0030915 C Smc5-Smc6 complex GO:0031398 P positive regulation of protein ubiquitination GO:0040008 P regulation of growth
11940	O_BomoMSG20747_complete:A_BomoMSG_c26767_g1_i1 150bp	Bomo_Chr3