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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
11881 O_BomoMSG20694_5prime_partial:A_BomoMSG_c26751_g1_i1
253bp
 protein_misato_[Bombyx_mori]
GO:0000070 P mitotic sister chromatid segregation
GO:0003674 F molecular_function
GO:0003924 F GTPase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005856 C cytoskeleton
GO:0008152 P metabolic process
GO:0090307 P mitotic spindle assembly
11882 O_BomoMSG20695_complete:A_BomoMSG_c26751_g1_i2
546bp
 protein_misato_[Bombyx_mori]
GO:0000070 P mitotic sister chromatid segregation
GO:0003674 F molecular_function
GO:0003924 F GTPase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005856 C cytoskeleton
GO:0008152 P metabolic process
GO:0090307 P mitotic spindle assembly
11883 O_BomoMSG20696_5prime_partial:A_BomoMSG_c26751_g1_i4
472bp
 protein_misato_[Bombyx_mori]
GO:0000070 P mitotic sister chromatid segregation
GO:0003674 F molecular_function
GO:0003924 F GTPase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005856 C cytoskeleton
GO:0008152 P metabolic process
GO:0090307 P mitotic spindle assembly
11884 O_BomoMSG20697_3prime_partial:A_BomoMSG_c26752_g1_i2
502bp
 DNA_topoisomerase_2_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003916 F DNA topoisomerase activity
GO:0003918 F DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006259 P DNA metabolic process
GO:0006265 P DNA topological change
GO:0016853 F isomerase activity
GO:0046872 F metal ion binding
11885 O_BomoMSG20698_complete:A_BomoMSG_c26753_g1_i1
321bp
 iron-sulfur_protein_NUBPL_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0032981 P mitochondrial respiratory chain complex I assembly
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0070584 P mitochondrion morphogenesis
11886 O_BomoMSG20699_complete:A_BomoMSG_c26753_g1_i1
107bp
 Uncharacterised_protein_[Bordetella_pertussis]
11887 O_BomoMSG2069_complete:A_BomoMSG_c9983_g1_i1
469bp
 yellow-d_isoform_X1_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0007275 P multicellular organism development
GO:0042438 P melanin biosynthetic process
GO:0060179 P male mating behavior
11888 O_BomoMSG206_complete:A_BomoMSG_c933_g1_i2
237bp
 tetraspanin_D_[Bombyx_mori]
GO:0002092 P positive regulation of receptor internalization
GO:0005576 C extracellular region
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005771 C multivesicular body
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0012505 C endomembrane system
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016477 P cell migration
GO:0031226 C intrinsic component of plasma membrane
GO:0031902 C late endosome membrane
GO:0035646 P endosome to melanosome transport
GO:0042470 C melanosome
GO:0045807 P positive regulation of endocytosis
GO:0048757 P pigment granule maturation
GO:0070062 C extracellular exosome
GO:0097487 C multivesicular body, internal vesicle
GO:1900746 P regulation of vascular endothelial growth factor signaling pathway
GO:2001046 P positive regulation of integrin-mediated signaling pathway
11889 O_BomoMSG20700_5prime_partial:A_BomoMSG_c26754_g1_i1
705bp
 laminin_beta-wing_chain_[Bombyx_mori]
GO:0003143 P embryonic heart tube morphogenesis
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005605 C basement membrane
GO:0007155 P cell adhesion
GO:0008406 P gonad development
GO:0009887 P animal organ morphogenesis
GO:0009888 P tissue development
GO:0012505 C endomembrane system
GO:0016477 P cell migration
GO:0030198 P extracellular matrix organization
GO:0031012 C extracellular matrix
GO:0033627 P cell adhesion mediated by integrin
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0045089 P positive regulation of innate immune response
GO:0048513 P animal organ development
GO:0048598 P embryonic morphogenesis
GO:0050829 P defense response to Gram-negative bacterium
GO:0055013 P cardiac muscle cell development
GO:0070831 P basement membrane assembly
11890 O_BomoMSG20701_5prime_partial:A_BomoMSG_c26754_g1_i2
517bp
 laminin_beta-wing_chain_[Bombyx_mori]
GO:0003143 P embryonic heart tube morphogenesis
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005605 C basement membrane
GO:0007155 P cell adhesion
GO:0008406 P gonad development
GO:0009887 P animal organ morphogenesis
GO:0009888 P tissue development
GO:0012505 C endomembrane system
GO:0016477 P cell migration
GO:0030198 P extracellular matrix organization
GO:0031012 C extracellular matrix
GO:0033627 P cell adhesion mediated by integrin
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0045089 P positive regulation of innate immune response
GO:0048513 P animal organ development
GO:0048598 P embryonic morphogenesis
GO:0050829 P defense response to Gram-negative bacterium
GO:0055013 P cardiac muscle cell development
GO:0070831 P basement membrane assembly
11891 O_BomoMSG20702_5prime_partial:A_BomoMSG_c26754_g1_i3
183bp
 laminin_beta-wing_chain_[Bombyx_mori]
GO:0003143 P embryonic heart tube morphogenesis
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005605 C basement membrane
GO:0007155 P cell adhesion
GO:0008406 P gonad development
GO:0009887 P animal organ morphogenesis
GO:0009888 P tissue development
GO:0012505 C endomembrane system
GO:0016477 P cell migration
GO:0030198 P extracellular matrix organization
GO:0031012 C extracellular matrix
GO:0033627 P cell adhesion mediated by integrin
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0045089 P positive regulation of innate immune response
GO:0048513 P animal organ development
GO:0048598 P embryonic morphogenesis
GO:0050829 P defense response to Gram-negative bacterium
GO:0055013 P cardiac muscle cell development
GO:0070831 P basement membrane assembly
11892 O_BomoMSG20703_5prime_partial:A_BomoMSG_c26754_g1_i4
543bp
 laminin_beta-wing_chain_[Bombyx_mori]
GO:0003143 P embryonic heart tube morphogenesis
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005605 C basement membrane
GO:0007155 P cell adhesion
GO:0008406 P gonad development
GO:0009887 P animal organ morphogenesis
GO:0009888 P tissue development
GO:0012505 C endomembrane system
GO:0016477 P cell migration
GO:0030198 P extracellular matrix organization
GO:0031012 C extracellular matrix
GO:0033627 P cell adhesion mediated by integrin
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0045089 P positive regulation of innate immune response
GO:0048513 P animal organ development
GO:0048598 P embryonic morphogenesis
GO:0050829 P defense response to Gram-negative bacterium
GO:0055013 P cardiac muscle cell development
GO:0070831 P basement membrane assembly
11893 O_BomoMSG20704_5prime_partial:A_BomoMSG_c26755_g1_i3
247bp
 glycosyltransferase_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0001744 P insect visual primordium formation
GO:0005576 C extracellular region
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0006486 P protein glycosylation
GO:0006688 P glycosphingolipid biosynthetic process
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007293 P germarium-derived egg chamber formation
GO:0007298 P border follicle cell migration
GO:0007299 P ovarian follicle cell-cell adhesion
GO:0008375 F acetylglucosaminyltransferase activity
GO:0008378 F galactosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016333 P morphogenesis of follicular epithelium
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030707 P ovarian follicle cell development
GO:0042248 P maintenance of polarity of follicular epithelium
GO:0046981 F beta-1,4-mannosylglycolipid beta-1,3-N-acetylglucosaminyltransferase activity
GO:0047915 F ganglioside galactosyltransferase activity
GO:0048477 P oogenesis
11894 O_BomoMSG20705_complete:A_BomoMSG_c26755_g1_i4
354bp
 glycosyltransferase_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0001744 P insect visual primordium formation
GO:0005576 C extracellular region
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0006486 P protein glycosylation
GO:0006688 P glycosphingolipid biosynthetic process
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007293 P germarium-derived egg chamber formation
GO:0007298 P border follicle cell migration
GO:0007299 P ovarian follicle cell-cell adhesion
GO:0008375 F acetylglucosaminyltransferase activity
GO:0008378 F galactosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016333 P morphogenesis of follicular epithelium
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030707 P ovarian follicle cell development
GO:0042248 P maintenance of polarity of follicular epithelium
GO:0046981 F beta-1,4-mannosylglycolipid beta-1,3-N-acetylglucosaminyltransferase activity
GO:0047915 F ganglioside galactosyltransferase activity
GO:0048477 P oogenesis
11895 O_BomoMSG20706_complete:A_BomoMSG_c26755_g1_i4
117bp
 protein_C10_[Helicoverpa_armigera]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0008150 P biological_process
11896 O_BomoMSG20707_5prime_partial:A_BomoMSG_c26755_g1_i5
225bp
 beta-1,3-galactosyltransferase_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0001744 P insect visual primordium formation
GO:0005576 C extracellular region
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0006486 P protein glycosylation
GO:0006688 P glycosphingolipid biosynthetic process
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007293 P germarium-derived egg chamber formation
GO:0007298 P border follicle cell migration
GO:0007299 P ovarian follicle cell-cell adhesion
GO:0008375 F acetylglucosaminyltransferase activity
GO:0008378 F galactosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016333 P morphogenesis of follicular epithelium
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030707 P ovarian follicle cell development
GO:0042248 P maintenance of polarity of follicular epithelium
GO:0046981 F beta-1,4-mannosylglycolipid beta-1,3-N-acetylglucosaminyltransferase activity
GO:0047915 F ganglioside galactosyltransferase activity
GO:0048477 P oogenesis
11897 O_BomoMSG20708_internal:A_BomoMSG_c26756_g1_i1
473bp
 uncharacterized_protein_LOC101738354_isoform_X1_[Bombyx_mori]
GO:0000794 C condensed nuclear chromosome
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007435 P salivary gland morphogenesis
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0031208 F POZ domain binding
GO:0031519 C PcG protein complex
GO:0035167 P larval lymph gland hemopoiesis
GO:0042803 F protein homodimerization activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
11898 O_BomoMSG20709_3prime_partial:A_BomoMSG_c26756_g1_i2
502bp
 uncharacterized_protein_LOC101738354_isoform_X2_[Bombyx_mori]
GO:0000794 C condensed nuclear chromosome
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007435 P salivary gland morphogenesis
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0031208 F POZ domain binding
GO:0031519 C PcG protein complex
GO:0035167 P larval lymph gland hemopoiesis
GO:0042803 F protein homodimerization activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
11899 O_BomoMSG2070_complete:A_BomoMSG_c9983_g1_i2
447bp
 yellow-d_isoform_X1_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0007275 P multicellular organism development
GO:0042438 P melanin biosynthetic process
GO:0060179 P male mating behavior
11900 O_BomoMSG20710_internal:A_BomoMSG_c26756_g1_i3
256bp
 uncharacterized_protein_LOC101738354_isoform_X1_[Bombyx_mori]
11901 O_BomoMSG20711_3prime_partial:A_BomoMSG_c26756_g1_i4
508bp
 uncharacterized_protein_LOC101738354_isoform_X1_[Bombyx_mori]
GO:0000794 C condensed nuclear chromosome
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007435 P salivary gland morphogenesis
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0031208 F POZ domain binding
GO:0031519 C PcG protein complex
GO:0035167 P larval lymph gland hemopoiesis
GO:0042803 F protein homodimerization activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
11902 O_BomoMSG20712_internal:A_BomoMSG_c26757_g4_i2
254bp
 protein_FAM160B1-like_isoform_X1_[Helicoverpa_armigera]
11903 O_BomoMSG20713_internal:A_BomoMSG_c26757_g4_i4
256bp
 protein_FAM160B1-like_isoform_X1_[Helicoverpa_armigera]
11904 O_BomoMSG20714_5prime_partial:A_BomoMSG_c26757_g6_i1
157bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101742651_[Bombyx_mori]
11905 O_BomoMSG20715_complete:A_BomoMSG_c26757_g6_i2
136bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101742651_[Bombyx_mori]
11906 O_BomoMSG20716_complete:A_BomoMSG_c26758_g3_i1
121bp
 transposase_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
11907 O_BomoMSG20717_complete:A_BomoMSG_c26758_g3_i2
154bp
 transposase_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
11908 O_BomoMSG20718_5prime_partial:A_BomoMSG_c26759_g1_i1
645bp
 Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
11909 O_BomoMSG20719_5prime_partial:A_BomoMSG_c26759_g1_i2
532bp
 Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
11910 O_BomoMSG2071_5prime_partial:A_BomoMSG_c9985_g1_i1
594bp
 sorting_nexin_lst-4_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0006886 P intracellular protein transport
GO:0007067 P mitotic cell cycle
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0019902 F phosphatase binding
GO:0030670 C phagocytic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0035091 F phosphatidylinositol binding
GO:0043621 F protein self-association
GO:0045335 C phagocytic vesicle
GO:0051020 F GTPase binding
GO:0090386 P phagosome maturation involved in apoptotic cell clearance
GO:0090389 P phagosome-lysosome fusion involved in apoptotic cell clearance
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