Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
11791	O_BomoMSG20612_complete:A_BomoMSG_c26728_g1_i1 155bp	Bomo_Chr4
11792	O_BomoMSG20613_3prime_partial:A_BomoMSG_c26728_g1_i1 139bp	Bomo_Chr4
11793	O_BomoMSG20614_5prime_partial:A_BomoMSG_c26729_g1_i1 266bp	Bomo_Chr24	serine_hydrolase-like_protein_[Bombyx_mori]	GO:0005739 C mitochondrion GO:0008152 P metabolic process GO:0016787 F hydrolase activity
11794	O_BomoMSG20615_complete:A_BomoMSG_c26729_g1_i2 282bp	Bomo_Chr24	serine_hydrolase-like_protein_[Bombyx_mori]	GO:0005739 C mitochondrion GO:0008152 P metabolic process GO:0016787 F hydrolase activity
11795	O_BomoMSG20616_5prime_partial:A_BomoMSG_c26729_g1_i3 189bp	Bomo_Chr24	serine_hydrolase-like_protein_[Bombyx_mori]
11796	O_BomoMSG20617_5prime_partial:A_BomoMSG_c26729_g1_i4 281bp	Bomo_Chr24	serine_hydrolase-like_protein_[Bombyx_mori]	GO:0005739 C mitochondrion GO:0008152 P metabolic process GO:0016787 F hydrolase activity
11797	O_BomoMSG20618_complete:A_BomoMSG_c26729_g1_i5 312bp	Bomo_Chr24	serine_hydrolase-like_protein_[Bombyx_mori]	GO:0005739 C mitochondrion GO:0008152 P metabolic process GO:0016787 F hydrolase activity
11798	O_BomoMSG20619_internal:A_BomoMSG_c26730_g1_i2 931bp	Bomo_Chr18	plexin_A3_[Bombyx_mori]	GO:0002116 C semaphorin receptor complex GO:0005886 C plasma membrane GO:0005887 C integral component of plasma membrane GO:0007165 P signal transduction GO:0007399 P nervous system development GO:0007411 P axon guidance GO:0008045 P motor neuron axon guidance GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0017154 F semaphorin receptor activity GO:0021602 P cranial nerve morphogenesis GO:0021610 P facial nerve morphogenesis GO:0021612 P facial nerve structural organization GO:0021615 P glossopharyngeal nerve morphogenesis GO:0021636 P trigeminal nerve morphogenesis GO:0021637 P trigeminal nerve structural organization GO:0021644 P vagus nerve morphogenesis GO:0021784 P postganglionic parasympathetic fiber development GO:0021785 P branchiomotor neuron axon guidance GO:0021793 P chemorepulsion of branchiomotor axon GO:0021960 P anterior commissure morphogenesis GO:0030334 P regulation of cell migration GO:0048485 P sympathetic nervous system development GO:0048812 P neuron projection morphogenesis GO:0048841 P regulation of axon extension involved in axon guidance GO:0050923 P regulation of negative chemotaxis GO:0071526 P semaphorin-plexin signaling pathway GO:1902287 P semaphorin-plexin signaling pathway involved in axon guidance
11799	O_BomoMSG2061_internal:A_BomoMSG_c9960_g1_i1 121bp	Bomo_Chr27	rho_GTPase-activating_protein_190_isoform_X3_[Bombyx_mori]	GO:0005096 F GTPase activator activity GO:0005525 F GTP binding GO:0005575 C cellular_component GO:0005622 C intracellular anatomical structure GO:0007165 P signal transduction GO:0007264 P small GTPase mediated signal transduction GO:0007266 P Rho protein signal transduction GO:0007275 P multicellular organism development GO:0007415 P defasciculation of motor neuron axon GO:0016319 P mushroom body development GO:0030215 F semaphorin receptor binding GO:0043547 P positive regulation of GTPase activity GO:0045792 P negative regulation of cell size GO:0050770 P regulation of axonogenesis
11800	O_BomoMSG20620_3prime_partial:A_BomoMSG_c26730_g1_i3 1395bp	Bomo_Chr18	plexin_A3_[Bombyx_mori]	GO:0002116 C semaphorin receptor complex GO:0005886 C plasma membrane GO:0005887 C integral component of plasma membrane GO:0007165 P signal transduction GO:0008045 P motor neuron axon guidance GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0017154 F semaphorin receptor activity GO:0021785 P branchiomotor neuron axon guidance GO:0030334 P regulation of cell migration GO:0042803 F protein homodimerization activity GO:0048675 P axon extension GO:0048696 P regulation of collateral sprouting in absence of injury GO:0048755 P branching morphogenesis of a nerve GO:0048841 P regulation of axon extension involved in axon guidance GO:0060272 P embryonic skeletal joint morphogenesis GO:0071526 P semaphorin-plexin signaling pathway GO:1902287 P semaphorin-plexin signaling pathway involved in axon guidance
11801	O_BomoMSG20621_internal:A_BomoMSG_c26731_g1_i1 413bp	Bomo_Chr17	pyridoxal-dependent_decarboxylase_domain-containing_protein_1_isoform_X3_[Bombyx_mori]	GO:0003824 F catalytic activity GO:0016829 F lyase activity GO:0016831 F carboxy-lyase activity GO:0019752 P carboxylic acid metabolic process GO:0030170 F pyridoxal phosphate binding
11802	O_BomoMSG20622_internal:A_BomoMSG_c26733_g1_i2 482bp	Bomo_Chr5	probable_leucine--tRNA_ligase,_mitochondrial_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0002161 F aminoacyl-tRNA editing activity GO:0004812 F aminoacyl-tRNA ligase activity GO:0004823 F leucine-tRNA ligase activity GO:0005524 F ATP binding GO:0005739 C mitochondrion GO:0005759 C mitochondrial matrix GO:0005829 C cytosol GO:0006412 P translation GO:0006418 P tRNA aminoacylation for protein translation GO:0006429 P leucyl-tRNA aminoacylation GO:0006450 P regulation of translational fidelity GO:0016874 F ligase activity
11803	O_BomoMSG20623_internal:A_BomoMSG_c26733_g1_i3 564bp	Bomo_Chr5	probable_leucine--tRNA_ligase,_mitochondrial_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0002161 F aminoacyl-tRNA editing activity GO:0004812 F aminoacyl-tRNA ligase activity GO:0004823 F leucine-tRNA ligase activity GO:0005524 F ATP binding GO:0005739 C mitochondrion GO:0005759 C mitochondrial matrix GO:0005829 C cytosol GO:0006412 P translation GO:0006418 P tRNA aminoacylation for protein translation GO:0006429 P leucyl-tRNA aminoacylation GO:0006450 P regulation of translational fidelity GO:0016874 F ligase activity
11804	O_BomoMSG20624_3prime_partial:A_BomoMSG_c26734_g1_i1 491bp	Bomo_Chr4	geranylgeranyl_transferase_type-2_subunit_alpha_[Bombyx_mori]	GO:0004659 F prenyltransferase activity GO:0004663 F Rab geranylgeranyltransferase activity GO:0005968 C Rab-protein geranylgeranyltransferase complex GO:0008270 F zinc ion binding GO:0008318 F protein prenyltransferase activity GO:0016740 F transferase activity GO:0017137 F small GTPase binding GO:0018342 P protein prenylation GO:0018344 P protein geranylgeranylation
11805	O_BomoMSG20625_internal:A_BomoMSG_c26734_g1_i2 344bp	Bomo_Chr4	geranylgeranyl_transferase_type-2_subunit_alpha_[Bombyx_mori]	GO:0004659 F prenyltransferase activity GO:0004663 F Rab geranylgeranyltransferase activity GO:0005968 C Rab-protein geranylgeranyltransferase complex GO:0008270 F zinc ion binding GO:0008318 F protein prenyltransferase activity GO:0016740 F transferase activity GO:0017137 F small GTPase binding GO:0018342 P protein prenylation GO:0018344 P protein geranylgeranylation
11806	O_BomoMSG20626_5prime_partial:A_BomoMSG_c26736_g1_i1 193bp	Bomo_Chr21
11807	O_BomoMSG20627_5prime_partial:A_BomoMSG_c26736_g1_i1 136bp	Bomo_Chr21	hnRNPA/B-like_28_isoform_X5_[Bombyx_mori]
11808	O_BomoMSG20628_complete:A_BomoMSG_c26736_g1_i1 106bp	Bomo_Chr21
11809	O_BomoMSG20629_complete:A_BomoMSG_c26736_g1_i1 105bp	Bomo_Chr21
11810	O_BomoMSG2062_3prime_partial:A_BomoMSG_c9965_g1_i1 153bp	Bomo_Chr24	zinc_finger_protein_226_isoform_X1_[Bombyx_mori]
11811	O_BomoMSG20630_5prime_partial:A_BomoMSG_c26736_g1_i2 188bp	Bomo_Chr21	hnRNPA/B-like_28_isoform_X4_[Bombyx_mori]
11812	O_BomoMSG20631_5prime_partial:A_BomoMSG_c26736_g1_i2 184bp	Bomo_Chr21	hnRNPA/B-like_28_isoform_X3_[Bombyx_mori]
11813	O_BomoMSG20632_3prime_partial:A_BomoMSG_c26736_g1_i2 179bp	Bomo_Chr21
11814	O_BomoMSG20633_complete:A_BomoMSG_c26736_g1_i2 105bp	Bomo_Chr21
11815	O_BomoMSG20634_5prime_partial:A_BomoMSG_c26736_g1_i4 193bp	Bomo_Chr21
11816	O_BomoMSG20635_5prime_partial:A_BomoMSG_c26736_g1_i4 136bp	Bomo_Chr21	hnRNPA/B-like_28_isoform_X5_[Bombyx_mori]
11817	O_BomoMSG20636_5prime_partial:A_BomoMSG_c26736_g1_i4 117bp	Bomo_Chr21
11818	O_BomoMSG20637_complete:A_BomoMSG_c26736_g1_i5 105bp	Bomo_Chr21
11819	O_BomoMSG20638_complete:A_BomoMSG_c26736_g1_i6 105bp	Bomo_Chr21
11820	O_BomoMSG20639_internal:A_BomoMSG_c26737_g1_i2 269bp	Bomo_Chr25	LOW_QUALITY_PROTEIN:_rap_guanine_nucleotide_exchange_factor_2_[Bombyx_mori]	GO:0000165 P MAPK cascade GO:0001568 P blood vessel development GO:0001764 P neuron migration GO:0004871 F obsolete signal transducer activity GO:0005085 F guanyl-nucleotide exchange factor activity GO:0005088 F guanyl-nucleotide exchange factor activity GO:0005096 F GTPase activator activity GO:0005509 F calcium ion binding GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0005768 C endosome GO:0005770 C late endosome GO:0005829 C cytosol GO:0005886 C plasma membrane GO:0005887 C integral component of plasma membrane GO:0005911 C cell-cell junction GO:0005923 C bicellular tight junction GO:0007165 P signal transduction GO:0007186 P G protein-coupled receptor signaling pathway GO:0007218 P neuropeptide signaling pathway GO:0007264 P small GTPase mediated signal transduction GO:0007275 P multicellular organism development GO:0007399 P nervous system development GO:0008285 P negative regulation of cell population proliferation GO:0010976 P positive regulation of neuron projection development GO:0016020 C membrane GO:0016324 C apical plasma membrane GO:0017034 F guanyl-nucleotide exchange factor activity GO:0019933 P cAMP-mediated signaling GO:0019992 F diacylglycerol binding GO:0021591 P ventricular system development GO:0021884 P forebrain neuron development GO:0030033 P microvillus assembly GO:0030054 C cell junction GO:0030139 C endocytic vesicle GO:0030154 P cell differentiation GO:0030165 F PDZ domain binding GO:0030552 F cAMP binding GO:0030553 F cGMP binding GO:0031175 P neuron projection development GO:0031547 P brain-derived neurotrophic factor receptor signaling pathway GO:0031697 F beta-1 adrenergic receptor binding GO:0032092 P positive regulation of protein binding GO:0032486 P Rap protein signal transduction GO:0035556 P intracellular signal transduction GO:0038180 P nerve growth factor signaling pathway GO:0042127 P regulation of cell population proliferation GO:0043005 C neuron projection GO:0043025 C neuronal cell body GO:0043234 C protein-containing complex GO:0043547 P positive regulation of GTPase activity GO:0043950 P positive regulation of cAMP-mediated signaling GO:0045202 C synapse GO:0045860 P positive regulation of protein kinase activity GO:0048022 P negative regulation of melanin biosynthetic process GO:0048167 P regulation of synaptic plasticity GO:0048471 C perinuclear region of cytoplasm GO:0050699 F WW domain binding GO:0050774 P negative regulation of dendrite morphogenesis GO:0061028 P establishment of endothelial barrier GO:0070300 F phosphatidic acid binding GO:0070374 P positive regulation of ERK1 and ERK2 cascade GO:0071320 P cellular response to cAMP GO:0071321 P cellular response to cGMP GO:0071880 P adenylate cyclase-activating adrenergic receptor signaling pathway GO:0072659 P protein localization to plasma membrane GO:0090557 P establishment of endothelial intestinal barrier GO:1901888 P regulation of cell junction assembly GO:1990090 P cellular response to nerve growth factor stimulus GO:2000481 P positive regulation of cAMP-dependent protein kinase activity GO:2000670 P positive regulation of dendritic cell apoptotic process GO:2001214 P positive regulation of vasculogenesis GO:2001224 P positive regulation of neuron migration