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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
11161 O_BomoMSG20045_complete:A_BomoMSG_c26585_g2_i1
129bp
 putative_pol-like_protein,_partial_[Operophtera_brumata]
11162 O_BomoMSG20046_3prime_partial:A_BomoMSG_c26585_g2_i1
115bp
11163 O_BomoMSG20047_5prime_partial:A_BomoMSG_c26585_g1_i4
250bp
 uncharacterized_protein_LOC110385835_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
11164 O_BomoMSG20048_3prime_partial:A_BomoMSG_c26585_g1_i4
166bp
 putative_pol-like_protein,_partial_[Operophtera_brumata]
11165 O_BomoMSG20049_internal:A_BomoMSG_c26585_g1_i5
129bp
 PREDICTED:_uncharacterized_protein_LOC107042388_[Diachasma_alloeum]
11166 O_BomoMSG2004_complete:A_BomoMSG_c9785_g1_i1
598bp
 uncharacterized_protein_LOC101743893_isoform_X1_[Bombyx_mori]
11167 O_BomoMSG20050_internal:A_BomoMSG_c26585_g1_i6
304bp
 putative_pol-like_protein_[Operophtera_brumata]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
11168 O_BomoMSG20051_5prime_partial:A_BomoMSG_c26585_g1_i7
206bp
 uncharacterized_protein_LOC110385835_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
11169 O_BomoMSG20052_internal:A_BomoMSG_c26585_g1_i8
554bp
 putative_pol-like_protein,_partial_[Operophtera_brumata]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
11170 O_BomoMSG20053_complete:A_BomoMSG_c26586_g1_i1
480bp
 facilitated_trehalose_transporter_Tret1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015767 P lactose transport
GO:0015768 P maltose transport
GO:0015770 P sucrose transport
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
11171 O_BomoMSG20054_complete:A_BomoMSG_c26586_g1_i2
323bp
 facilitated_trehalose_transporter_Tret1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015767 P lactose transport
GO:0015768 P maltose transport
GO:0015770 P sucrose transport
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
11172 O_BomoMSG20055_5prime_partial:A_BomoMSG_c26586_g1_i4
167bp
 facilitated_trehalose_transporter_Tret1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015767 P lactose transport
GO:0015768 P maltose transport
GO:0015770 P sucrose transport
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
11173 O_BomoMSG20056_complete:A_BomoMSG_c26586_g1_i5
323bp
 facilitated_trehalose_transporter_Tret1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015767 P lactose transport
GO:0015768 P maltose transport
GO:0015770 P sucrose transport
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
11174 O_BomoMSG20057_complete:A_BomoMSG_c26586_g1_i5
123bp
 PREDICTED:_facilitated_trehalose_transporter_Tret1-like_[Amyelois_transitella]
11175 O_BomoMSG20058_5prime_partial:A_BomoMSG_c26586_g1_i6
401bp
 facilitated_trehalose_transporter_Tret1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015767 P lactose transport
GO:0015768 P maltose transport
GO:0015770 P sucrose transport
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
11176 O_BomoMSG20059_3prime_partial:A_BomoMSG_c26587_g1_i1
699bp
 MMS19_nucleotide_excision_repair_protein_homolog_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006259 P DNA metabolic process
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016226 P iron-sulfur cluster assembly
GO:0097361 C CIA complex
11177 O_BomoMSG2005_internal:A_BomoMSG_c9787_g1_i1
139bp
 Sodium-independent_sulfate_anion_transporter,_partial_[Operophtera_brumata]
GO:0005254 F chloride channel activity
GO:0005654 C nucleoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0008271 F secondary active sulfate transmembrane transporter activity
GO:0008272 P sulfate transport
GO:0008509 F anion transmembrane transporter activity
GO:0015106 F bicarbonate transmembrane transporter activity
GO:0015116 F sulfate transmembrane transporter activity
GO:0015301 F anion:anion antiporter activity
GO:0015701 P bicarbonate transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019531 F oxalate transmembrane transporter activity
GO:0019532 P oxalate transport
GO:0042391 P regulation of membrane potential
GO:0043231 C intracellular membrane-bounded organelle
GO:0051453 P regulation of intracellular pH
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
GO:1902358 P sulfate transmembrane transport
GO:1902476 P chloride transmembrane transport
11178 O_BomoMSG20060_complete:A_BomoMSG_c26587_g1_i1
165bp
11179 O_BomoMSG20061_5prime_partial:A_BomoMSG_c26587_g2_i1
277bp
 MMS19_nucleotide_excision_repair_protein_homolog_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006259 P DNA metabolic process
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016226 P iron-sulfur cluster assembly
GO:0097361 C CIA complex
11180 O_BomoMSG20062_complete:A_BomoMSG_c26588_g3_i2
687bp
 nucleolar_complex_protein_2_homolog_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003674 F molecular_function
GO:0003714 F transcription corepressor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0022008 P neurogenesis
GO:0030690 C Noc1p-Noc2p complex
GO:0030691 C Noc2p-Noc3p complex
GO:0035067 P negative regulation of histone acetylation
GO:0042273 P ribosomal large subunit biogenesis
GO:0042393 F histone binding
GO:0070491 F DNA-binding transcription factor binding
11181 O_BomoMSG20063_complete:A_BomoMSG_c26588_g3_i2
125bp
11182 O_BomoMSG20064_complete:A_BomoMSG_c26588_g3_i3
687bp
 nucleolar_complex_protein_2_homolog_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003674 F molecular_function
GO:0003714 F transcription corepressor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0022008 P neurogenesis
GO:0030690 C Noc1p-Noc2p complex
GO:0030691 C Noc2p-Noc3p complex
GO:0035067 P negative regulation of histone acetylation
GO:0042273 P ribosomal large subunit biogenesis
GO:0042393 F histone binding
GO:0070491 F DNA-binding transcription factor binding
11183 O_BomoMSG20065_complete:A_BomoMSG_c26588_g3_i3
125bp
11184 O_BomoMSG20066_complete:A_BomoMSG_c26588_g3_i4
687bp
 nucleolar_complex_protein_2_homolog_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003674 F molecular_function
GO:0003714 F transcription corepressor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0022008 P neurogenesis
GO:0030690 C Noc1p-Noc2p complex
GO:0030691 C Noc2p-Noc3p complex
GO:0035067 P negative regulation of histone acetylation
GO:0042273 P ribosomal large subunit biogenesis
GO:0042393 F histone binding
GO:0070491 F DNA-binding transcription factor binding
11185 O_BomoMSG20067_complete:A_BomoMSG_c26588_g3_i4
125bp
11186 O_BomoMSG20068_complete:A_BomoMSG_c26588_g3_i6
687bp
 nucleolar_complex_protein_2_homolog_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003674 F molecular_function
GO:0003714 F transcription corepressor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0022008 P neurogenesis
GO:0030690 C Noc1p-Noc2p complex
GO:0030691 C Noc2p-Noc3p complex
GO:0035067 P negative regulation of histone acetylation
GO:0042273 P ribosomal large subunit biogenesis
GO:0042393 F histone binding
GO:0070491 F DNA-binding transcription factor binding
11187 O_BomoMSG20069_complete:A_BomoMSG_c26588_g3_i6
125bp
11188 O_BomoMSG2006_complete:A_BomoMSG_c9788_g1_i1
145bp
 protein_phosphatase_1_regulatory_subunit_14B_isoform_X4_[Bombyx_mori]
GO:0004864 F protein phosphatase inhibitor activity
GO:0004865 F protein serine/threonine phosphatase inhibitor activity
GO:0005737 C cytoplasm
GO:0008599 F protein phosphatase regulator activity
GO:0019212 F phosphatase inhibitor activity
GO:0035304 P regulation of protein dephosphorylation
GO:0042325 P regulation of phosphorylation
GO:0043086 P negative regulation of catalytic activity
GO:0045087 P innate immune response
GO:0050790 P regulation of catalytic activity
11189 O_BomoMSG20070_complete:A_BomoMSG_c26588_g3_i7
687bp
 nucleolar_complex_protein_2_homolog_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003674 F molecular_function
GO:0003714 F transcription corepressor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0022008 P neurogenesis
GO:0030690 C Noc1p-Noc2p complex
GO:0030691 C Noc2p-Noc3p complex
GO:0035067 P negative regulation of histone acetylation
GO:0042273 P ribosomal large subunit biogenesis
GO:0042393 F histone binding
GO:0070491 F DNA-binding transcription factor binding
11190 O_BomoMSG20071_complete:A_BomoMSG_c26588_g3_i7
125bp
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