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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
11131 O_BomoMSG20018_internal:A_BomoMSG_c26576_g1_i1
560bp
 uncharacterized_protein_LOC101739358_isoform_X1_[Bombyx_mori]
11132 O_BomoMSG20019_complete:A_BomoMSG_c26576_g1_i1
104bp
11133 O_BomoMSG2001_complete:A_BomoMSG_c9762_g1_i1
378bp
 uncharacterized_protein_LOC101736633_[Bombyx_mori]
11134 O_BomoMSG20020_internal:A_BomoMSG_c26576_g1_i2
287bp
 uncharacterized_protein_LOC101739358_isoform_X1_[Bombyx_mori]
11135 O_BomoMSG20021_complete:A_BomoMSG_c26576_g1_i2
104bp
11136 O_BomoMSG20022_internal:A_BomoMSG_c26577_g1_i1
452bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101739343_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0016020 C membrane
GO:0030154 P cell differentiation
GO:0030426 C growth cone
GO:0035023 P regulation of Rho protein signal transduction
GO:0042995 C cell projection
GO:0043065 P positive regulation of apoptotic process
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0048013 P ephrin receptor signaling pathway
GO:0051056 P regulation of small GTPase mediated signal transduction
GO:0061002 P negative regulation of dendritic spine morphogenesis
11137 O_BomoMSG20023_5prime_partial:A_BomoMSG_c26577_g1_i1
234bp
11138 O_BomoMSG20024_5prime_partial:A_BomoMSG_c26577_g1_i3
449bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101739343_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0017048 F small GTPase binding
GO:0030165 F PDZ domain binding
GO:0030971 F receptor tyrosine kinase binding
GO:0035023 P regulation of Rho protein signal transduction
GO:0043065 P positive regulation of apoptotic process
GO:0051056 P regulation of small GTPase mediated signal transduction
GO:0060326 P cell chemotaxis
GO:0090004 P positive regulation of protein localization to plasma membrane
GO:0090630 P activation of GTPase activity
11139 O_BomoMSG20025_5prime_partial:A_BomoMSG_c26577_g1_i4
217bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101739343_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0016020 C membrane
GO:0030154 P cell differentiation
GO:0030426 C growth cone
GO:0035023 P regulation of Rho protein signal transduction
GO:0042995 C cell projection
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0048013 P ephrin receptor signaling pathway
GO:0061002 P negative regulation of dendritic spine morphogenesis
11140 O_BomoMSG20026_3prime_partial:A_BomoMSG_c26577_g1_i4
117bp
11141 O_BomoMSG20027_5prime_partial:A_BomoMSG_c26577_g1_i5
327bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101739343_[Bombyx_mori]
GO:0001726 C ruffle
GO:0001886 P endothelial cell morphogenesis
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0035023 P regulation of Rho protein signal transduction
GO:0042995 C cell projection
GO:0043547 P positive regulation of GTPase activity
GO:0097178 P ruffle assembly
11142 O_BomoMSG20028_3prime_partial:A_BomoMSG_c26577_g1_i5
117bp
11143 O_BomoMSG20029_5prime_partial:A_BomoMSG_c26577_g1_i6
489bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101739343_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0016020 C membrane
GO:0030154 P cell differentiation
GO:0030426 C growth cone
GO:0035023 P regulation of Rho protein signal transduction
GO:0042995 C cell projection
GO:0043065 P positive regulation of apoptotic process
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0048013 P ephrin receptor signaling pathway
GO:0051056 P regulation of small GTPase mediated signal transduction
GO:0061002 P negative regulation of dendritic spine morphogenesis
11144 O_BomoMSG2002_internal:A_BomoMSG_c9778_g1_i1
122bp
 SNF4/AMP-activated_protein_kinase_gamma_subunit_[Bombyx_mori]
11145 O_BomoMSG20030_3prime_partial:A_BomoMSG_c26577_g1_i6
117bp
11146 O_BomoMSG20031_internal:A_BomoMSG_c26578_g1_i1
304bp
 uncharacterized_protein_LOC101737750_[Bombyx_mori]
GO:0005515 F protein binding
GO:0016020 C membrane
GO:0023052 P signaling
GO:0045202 C synapse
11147 O_BomoMSG20032_3prime_partial:A_BomoMSG_c26578_g1_i2
387bp
 uncharacterized_protein_LOC101737750_[Bombyx_mori]
GO:0005515 F protein binding
GO:0016020 C membrane
GO:0023052 P signaling
GO:0045202 C synapse
11148 O_BomoMSG20033_3prime_partial:A_BomoMSG_c26578_g1_i3
387bp
 uncharacterized_protein_LOC101737750_[Bombyx_mori]
GO:0005515 F protein binding
GO:0016020 C membrane
GO:0023052 P signaling
GO:0045202 C synapse
11149 O_BomoMSG20034_internal:A_BomoMSG_c26578_g1_i4
187bp
 uncharacterized_protein_LOC101737750_[Bombyx_mori]
GO:0005515 F protein binding
GO:0016020 C membrane
GO:0023052 P signaling
GO:0045202 C synapse
11150 O_BomoMSG20035_3prime_partial:A_BomoMSG_c26582_g1_i1
344bp
 actin-like_protein_6A_[Bombyx_mori]
GO:0000790 C chromatin
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003407 P neural retina development
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005886 C plasma membrane
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007399 P nervous system development
GO:0016514 C SWI/SNF complex
GO:0016568 P chromatin organization
GO:0021510 P spinal cord development
GO:0031011 C Ino80 complex
GO:0031492 F nucleosomal DNA binding
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043044 P chromatin remodeling
GO:0043234 C protein-containing complex
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
GO:0071564 C npBAF complex
GO:0090544 C SWI/SNF superfamily-type complex
GO:1903146 P regulation of autophagy of mitochondrion
GO:1903955 P positive regulation of protein targeting to mitochondrion
11151 O_BomoMSG20036_3prime_partial:A_BomoMSG_c26583_g1_i1
228bp
 transportin-3-like_[Bombyx_mori]
GO:0004872 F signaling receptor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0008139 F nuclear localization sequence binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0031965 C nuclear membrane
GO:0035048 P obsolete splicing factor protein import into nucleus
GO:0042802 F identical protein binding
GO:0043231 C intracellular membrane-bounded organelle
11152 O_BomoMSG20037_internal:A_BomoMSG_c26583_g2_i1
266bp
 transportin-3-like_[Bombyx_mori]
GO:0004872 F signaling receptor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0008139 F nuclear localization sequence binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0031965 C nuclear membrane
GO:0035048 P obsolete splicing factor protein import into nucleus
GO:0042802 F identical protein binding
GO:0043231 C intracellular membrane-bounded organelle
11153 O_BomoMSG20038_internal:A_BomoMSG_c26584_g1_i1
127bp
 putative_leucine-rich_repeat-containing_protein_DDB_G0290503_[Bombyx_mori]
11154 O_BomoMSG20039_3prime_partial:A_BomoMSG_c26584_g2_i1
382bp
 uncharacterized_protein_LOC110383808_[Helicoverpa_armigera]
11155 O_BomoMSG2003_internal:A_BomoMSG_c9782_g1_i1
104bp
 DNA_polymerase_theta_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0007049 P cell cycle
GO:0007275 P multicellular organism development
GO:0009640 P photomorphogenesis
GO:0009933 P meristem structural organization
GO:0010468 P regulation of gene expression
GO:0016787 F hydrolase activity
GO:0051301 P cell division
GO:0071897 P DNA biosynthetic process
GO:1902749 P regulation of cell cycle G2/M phase transition
GO:1990067 P intrachromosomal DNA recombination
GO:2000011 P regulation of adaxial/abaxial pattern formation
11156 O_BomoMSG20040_internal:A_BomoMSG_c26584_g3_i1
339bp
 putative_leucine-rich_repeat-containing_protein_DDB_G0290503_[Bombyx_mori]
11157 O_BomoMSG20041_internal:A_BomoMSG_c26585_g1_i1
301bp
 uncharacterized_protein_LOC110385835_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
11158 O_BomoMSG20042_3prime_partial:A_BomoMSG_c26585_g1_i2
396bp
 putative_pol-like_protein,_partial_[Operophtera_brumata]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
11159 O_BomoMSG20043_5prime_partial:A_BomoMSG_c26585_g1_i2
276bp
 putative_pol-like_protein_[Operophtera_brumata]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
11160 O_BomoMSG20044_internal:A_BomoMSG_c26585_g1_i3
159bp
 uncharacterized_protein_LOC110385835_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
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