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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
11071 O_BomoMSG19966_5prime_partial:A_BomoMSG_c26561_g1_i4
150bp
11072 O_BomoMSG19967_3prime_partial:A_BomoMSG_c26561_g1_i4
143bp
 sulfite_oxidase_isoform_X2_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0005829 C cytosol
GO:0006790 P sulfur compound metabolic process
GO:0007584 P response to nutrient
GO:0008482 F sulfite oxidase activity
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0030151 F molybdenum ion binding
GO:0042128 P nitrate assimilation
GO:0043546 F molybdopterin cofactor binding
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
11073 O_BomoMSG19968_5prime_partial:A_BomoMSG_c26561_g1_i4
133bp
11074 O_BomoMSG19969_complete:A_BomoMSG_c26562_g1_i1
810bp
 F-box/WD_repeat-containing_protein_7_isoform_X1_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0007049 P cell cycle
GO:0007088 P regulation of mitotic nuclear division
GO:0007096 P regulation of exit from mitosis
GO:0007411 P axon guidance
GO:0007419 P ventral cord development
GO:0008054 P anaphase-promoting complex-dependent catabolic process
GO:0016567 P protein ubiquitination
GO:0019005 C SCF ubiquitin ligase complex
GO:0030162 P regulation of proteolysis
GO:0030332 F cyclin binding
GO:0031146 P SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0035147 P branch fusion, open tracheal system
GO:0042023 P DNA endoreduplication
GO:0045926 P negative regulation of growth
GO:0060253 P negative regulation of glial cell proliferation
GO:0060438 P trachea development
GO:0071456 P cellular response to hypoxia
GO:1900038 P negative regulation of cellular response to hypoxia
GO:1903146 P regulation of autophagy of mitochondrion
11075 O_BomoMSG1996_3prime_partial:A_BomoMSG_c9740_g1_i1
142bp
 TBC1_domain_family_member_14_[Bombyx_mori]
11076 O_BomoMSG19970_complete:A_BomoMSG_c26562_g1_i1
116bp
11077 O_BomoMSG19971_complete:A_BomoMSG_c26562_g1_i2
831bp
 F-box/WD_repeat-containing_protein_7_isoform_X2_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0007049 P cell cycle
GO:0007088 P regulation of mitotic nuclear division
GO:0007096 P regulation of exit from mitosis
GO:0007411 P axon guidance
GO:0007419 P ventral cord development
GO:0008054 P anaphase-promoting complex-dependent catabolic process
GO:0016567 P protein ubiquitination
GO:0019005 C SCF ubiquitin ligase complex
GO:0030162 P regulation of proteolysis
GO:0030332 F cyclin binding
GO:0031146 P SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0035147 P branch fusion, open tracheal system
GO:0042023 P DNA endoreduplication
GO:0045926 P negative regulation of growth
GO:0060253 P negative regulation of glial cell proliferation
GO:0060438 P trachea development
GO:0071456 P cellular response to hypoxia
GO:1900038 P negative regulation of cellular response to hypoxia
GO:1903146 P regulation of autophagy of mitochondrion
11078 O_BomoMSG19972_complete:A_BomoMSG_c26562_g1_i2
116bp
11079 O_BomoMSG19973_5prime_partial:A_BomoMSG_c26563_g2_i1
139bp
 transposase,_partial_[Helicoverpa_zea]
11080 O_BomoMSG19974_internal:A_BomoMSG_c26564_g3_i1
501bp
 putative_fatty_acyl-CoA_reductase_CG5065_isoform_X1_[Bombyx_mori]
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0006629 P lipid metabolic process
GO:0008611 P ether lipid biosynthetic process
GO:0010025 P wax biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0035336 P long-chain fatty-acyl-CoA metabolic process
GO:0050062 F long-chain-fatty-acyl-CoA reductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0080019 F fatty-acyl-CoA reductase (alcohol-forming) activity
11081 O_BomoMSG19975_internal:A_BomoMSG_c26564_g3_i2
309bp
 putative_fatty_acyl-CoA_reductase_CG5065_isoform_X1_[Bombyx_mori]
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0006629 P lipid metabolic process
GO:0008611 P ether lipid biosynthetic process
GO:0010025 P wax biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0035336 P long-chain fatty-acyl-CoA metabolic process
GO:0046474 P glycerophospholipid biosynthetic process
GO:0050062 F long-chain-fatty-acyl-CoA reductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0080019 F fatty-acyl-CoA reductase (alcohol-forming) activity
11082 O_BomoMSG19976_internal:A_BomoMSG_c26564_g3_i3
142bp
 putative_fatty_acyl-CoA_reductase_CG5065_isoform_X3_[Bombyx_mori]
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0006629 P lipid metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0055114 P obsolete oxidation-reduction process
GO:0080019 F fatty-acyl-CoA reductase (alcohol-forming) activity
11083 O_BomoMSG19977_5prime_partial:A_BomoMSG_c26566_g1_i1
534bp
 isoleucine--tRNA_ligase,_cytoplasmic_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001649 P osteoblast differentiation
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004822 F isoleucine-tRNA ligase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006428 P isoleucyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0016020 C membrane
GO:0016874 F ligase activity
GO:0051020 F GTPase binding
GO:0070062 C extracellular exosome
11084 O_BomoMSG19978_5prime_partial:A_BomoMSG_c26566_g1_i2
1233bp
 isoleucine--tRNA_ligase,_cytoplasmic_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001649 P osteoblast differentiation
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004822 F isoleucine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006428 P isoleucyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0016020 C membrane
GO:0016874 F ligase activity
GO:0051020 F GTPase binding
GO:0070062 C extracellular exosome
11085 O_BomoMSG19979_5prime_partial:A_BomoMSG_c26566_g1_i3
1086bp
 isoleucine--tRNA_ligase,_cytoplasmic_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001649 P osteoblast differentiation
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004822 F isoleucine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006428 P isoleucyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0016020 C membrane
GO:0016874 F ligase activity
GO:0051020 F GTPase binding
GO:0070062 C extracellular exosome
11086 O_BomoMSG1997_complete:A_BomoMSG_c9741_g1_i1
411bp
 mannose-1-phosphate_guanyltransferase_alpha-A_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004475 F mannose-1-phosphate guanylyltransferase activity
GO:0005525 F GTP binding
GO:0005575 C cellular_component
GO:0009058 P biosynthetic process
GO:0009298 P GDP-mannose biosynthetic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
11087 O_BomoMSG19980_5prime_partial:A_BomoMSG_c26566_g1_i4
654bp
 isoleucine--tRNA_ligase,_cytoplasmic_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001649 P osteoblast differentiation
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004822 F isoleucine-tRNA ligase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006428 P isoleucyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0016020 C membrane
GO:0016874 F ligase activity
GO:0051020 F GTPase binding
GO:0070062 C extracellular exosome
11088 O_BomoMSG19981_5prime_partial:A_BomoMSG_c26567_g1_i1
381bp
 HOP_precursor_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0042052 P rhabdomere development
GO:0046716 P muscle cell cellular homeostasis
GO:0072499 P photoreceptor cell axon guidance
11089 O_BomoMSG19982_5prime_partial:A_BomoMSG_c26567_g1_i2
249bp
 HOP_precursor_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0042052 P rhabdomere development
GO:0046716 P muscle cell cellular homeostasis
GO:0072499 P photoreceptor cell axon guidance
11090 O_BomoMSG19983_5prime_partial:A_BomoMSG_c26567_g1_i3
118bp
 HOP_precursor_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0042052 P rhabdomere development
GO:0046716 P muscle cell cellular homeostasis
GO:0072499 P photoreceptor cell axon guidance
11091 O_BomoMSG19984_5prime_partial:A_BomoMSG_c26567_g1_i4
215bp
 HOP_precursor_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0042052 P rhabdomere development
GO:0046716 P muscle cell cellular homeostasis
GO:0072499 P photoreceptor cell axon guidance
11092 O_BomoMSG19985_5prime_partial:A_BomoMSG_c26567_g1_i5
368bp
 HOP_precursor_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0042052 P rhabdomere development
GO:0046716 P muscle cell cellular homeostasis
GO:0072499 P photoreceptor cell axon guidance
11093 O_BomoMSG19986_5prime_partial:A_BomoMSG_c26567_g1_i6
241bp
 HOP_precursor_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0042052 P rhabdomere development
GO:0046716 P muscle cell cellular homeostasis
GO:0072499 P photoreceptor cell axon guidance
11094 O_BomoMSG19987_complete:A_BomoMSG_c26567_g1_i7
639bp
 HOP_precursor_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0042052 P rhabdomere development
GO:0046716 P muscle cell cellular homeostasis
GO:0072499 P photoreceptor cell axon guidance
11095 O_BomoMSG19988_3prime_partial:A_BomoMSG_c26568_g1_i1
425bp
 ATP-dependent_RNA_helicase_DHX36_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000781 C chromosome, telomeric region
GO:0001047 F core promoter sequence-specific DNA binding
GO:0001503 P ossification
GO:0002151 F G-quadruplex RNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0008026 F helicase activity
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0009615 P response to virus
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0032206 P positive regulation of telomere maintenance
GO:0042826 F histone deacetylase binding
GO:0043330 P response to exogenous dsRNA
GO:0044212 F transcription cis-regulatory region binding
GO:0044822 F RNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051880 F G-quadruplex DNA binding
GO:0070062 C extracellular exosome
11096 O_BomoMSG19989_internal:A_BomoMSG_c26568_g1_i2
158bp
 ATP-dependent_RNA_helicase_DHX36_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000228 C nuclear chromosome
GO:0000785 C chromatin
GO:0000805 C X chromosome
GO:0003676 F nucleic acid binding
GO:0003682 F chromatin binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003725 F double-stranded RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0007549 P dosage compensation
GO:0008026 F helicase activity
GO:0008340 P determination of adult lifespan
GO:0009047 P dosage compensation by hyperactivation of X chromosome
GO:0016456 C X chromosome located dosage compensation complex, transcription activating
GO:0016457 P dosage compensation complex assembly involved in dosage compensation by hyperactivation of X chromosome
GO:0016787 F hydrolase activity
GO:0031453 P positive regulation of heterochromatin assembly
GO:0044822 F RNA binding
GO:0045433 P male courtship behavior, veined wing generated song production
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048675 P axon extension
GO:0072487 C MSL complex
11097 O_BomoMSG1998_complete:A_BomoMSG_c9741_g1_i1
117bp
11098 O_BomoMSG19990_internal:A_BomoMSG_c26568_g1_i3
194bp
 ATP-dependent_RNA_helicase_DHX36_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000781 C chromosome, telomeric region
GO:0001047 F core promoter sequence-specific DNA binding
GO:0001503 P ossification
GO:0002151 F G-quadruplex RNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0008026 F helicase activity
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0009615 P response to virus
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0032206 P positive regulation of telomere maintenance
GO:0042826 F histone deacetylase binding
GO:0043330 P response to exogenous dsRNA
GO:0044212 F transcription cis-regulatory region binding
GO:0044822 F RNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051880 F G-quadruplex DNA binding
GO:0070062 C extracellular exosome
11099 O_BomoMSG19991_3prime_partial:A_BomoMSG_c26568_g1_i4
442bp
 ATP-dependent_RNA_helicase_DHX36_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000781 C chromosome, telomeric region
GO:0001047 F core promoter sequence-specific DNA binding
GO:0001503 P ossification
GO:0002151 F G-quadruplex RNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0008026 F helicase activity
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0009615 P response to virus
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0032206 P positive regulation of telomere maintenance
GO:0042826 F histone deacetylase binding
GO:0043330 P response to exogenous dsRNA
GO:0044212 F transcription cis-regulatory region binding
GO:0044822 F RNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051880 F G-quadruplex DNA binding
GO:0070062 C extracellular exosome
11100 O_BomoMSG19992_3prime_partial:A_BomoMSG_c26569_g1_i1
418bp
 fanconi-associated_nuclease_1_[Bombyx_mori]
GO:0000724 P double-strand break repair via homologous recombination
GO:0003677 F DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004527 F exonuclease activity
GO:0004528 F phosphodiesterase I activity
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008409 F 5'-3' exonuclease activity
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0017108 F 5'-flap endonuclease activity
GO:0033683 P nucleotide-excision repair, DNA incision
GO:0036297 P interstrand cross-link repair
GO:0043130 F ubiquitin binding
GO:0046872 F metal ion binding
GO:0070336 F flap-structured DNA binding
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