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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
11041 O_BomoMSG19939_internal:A_BomoMSG_c26556_g2_i4
155bp
 ER_membrane_protein_complex_subunit_1_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005783 C endoplasmic reticulum
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034975 P protein folding in endoplasmic reticulum
GO:0072546 C EMC complex
11042 O_BomoMSG1993_internal:A_BomoMSG_c9738_g1_i1
105bp
11043 O_BomoMSG19940_internal:A_BomoMSG_c26556_g2_i5
391bp
 ER_membrane_protein_complex_subunit_1_isoform_X2_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034975 P protein folding in endoplasmic reticulum
GO:0072546 C EMC complex
11044 O_BomoMSG19941_5prime_partial:A_BomoMSG_c26557_g1_i1
469bp
 LOW_QUALITY_PROTEIN:_probable_C-mannosyltransferase_DPY19L1_[Bombyx_mori]
GO:0000030 F mannosyltransferase activity
GO:0005637 C nuclear inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0018406 P protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan
11045 O_BomoMSG19942_complete:A_BomoMSG_c26557_g1_i2
744bp
 LOW_QUALITY_PROTEIN:_probable_C-mannosyltransferase_DPY19L1_[Bombyx_mori]
GO:0000030 F mannosyltransferase activity
GO:0005637 C nuclear inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0018406 P protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan
11046 O_BomoMSG19943_5prime_partial:A_BomoMSG_c26557_g1_i3
663bp
 LOW_QUALITY_PROTEIN:_probable_C-mannosyltransferase_DPY19L1_[Bombyx_mori]
GO:0000030 F mannosyltransferase activity
GO:0005637 C nuclear inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0018406 P protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan
11047 O_BomoMSG19944_5prime_partial:A_BomoMSG_c26557_g1_i4
116bp
 LOW_QUALITY_PROTEIN:_probable_C-mannosyltransferase_DPY19L1_[Bombyx_mori]
GO:0000030 F mannosyltransferase activity
GO:0005637 C nuclear inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0018406 P protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan
11048 O_BomoMSG19945_5prime_partial:A_BomoMSG_c26557_g1_i5
443bp
 LOW_QUALITY_PROTEIN:_probable_C-mannosyltransferase_DPY19L1_[Bombyx_mori]
GO:0000030 F mannosyltransferase activity
GO:0005637 C nuclear inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0018406 P protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan
11049 O_BomoMSG19946_5prime_partial:A_BomoMSG_c26558_g1_i1
290bp
 endonuclease_G,_mitochondrial,_partial_[Bombyx_mori]
GO:0001701 P in utero embryonic development
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004536 F deoxyribonuclease activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006308 P DNA catabolic process
GO:0006309 P apoptotic DNA fragmentation
GO:0007568 P aging
GO:0009612 P response to mechanical stimulus
GO:0016787 F hydrolase activity
GO:0032355 P response to estradiol
GO:0034599 P cellular response to oxidative stress
GO:0034612 P response to tumor necrosis factor
GO:0036475 P neuron death in response to oxidative stress
GO:0043065 P positive regulation of apoptotic process
GO:0043204 C perikaryon
GO:0046677 P response to antibiotic
GO:0046872 F metal ion binding
GO:0071277 P cellular response to calcium ion
GO:0071333 P cellular response to glucose stimulus
GO:0071456 P cellular response to hypoxia
GO:1901300 P positive regulation of hydrogen peroxide-mediated programmed cell death
GO:1902512 P positive regulation of apoptotic DNA fragmentation
11050 O_BomoMSG19947_complete:A_BomoMSG_c26559_g1_i1
250bp
 tetratricopeptide_repeat_protein_14_homolog_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
11051 O_BomoMSG19948_complete:A_BomoMSG_c26559_g1_i2
244bp
 tetratricopeptide_repeat_protein_14_homolog_isoform_X4_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
11052 O_BomoMSG19949_complete:A_BomoMSG_c26559_g1_i4
1164bp
 tetratricopeptide_repeat_protein_14_homolog_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
11053 O_BomoMSG1994_internal:A_BomoMSG_c9738_g1_i1
105bp
11054 O_BomoMSG19950_complete:A_BomoMSG_c26559_g1_i4
203bp
 tetratricopeptide_repeat_protein_14_homolog_isoform_X4_[Bombyx_mori]
11055 O_BomoMSG19951_complete:A_BomoMSG_c26559_g1_i4
150bp
11056 O_BomoMSG19952_complete:A_BomoMSG_c26559_g1_i4
139bp
11057 O_BomoMSG19953_complete:A_BomoMSG_c26559_g1_i4
118bp
11058 O_BomoMSG19954_complete:A_BomoMSG_c26559_g1_i5
921bp
 tetratricopeptide_repeat_protein_14_homolog_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
11059 O_BomoMSG19955_complete:A_BomoMSG_c26559_g1_i5
261bp
 tetratricopeptide_repeat_protein_14_homolog_isoform_X4_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
11060 O_BomoMSG19956_complete:A_BomoMSG_c26559_g1_i5
203bp
 tetratricopeptide_repeat_protein_14_homolog_isoform_X4_[Bombyx_mori]
11061 O_BomoMSG19957_complete:A_BomoMSG_c26559_g1_i5
150bp
11062 O_BomoMSG19958_complete:A_BomoMSG_c26559_g1_i5
139bp
11063 O_BomoMSG19959_complete:A_BomoMSG_c26559_g1_i5
118bp
11064 O_BomoMSG1995_internal:A_BomoMSG_c9739_g1_i1
219bp
 translation_initiation_factor_IF-2,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003743 F translation initiation factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0008135 F translation factor activity, RNA binding
GO:0032790 P ribosome disassembly
GO:0043024 F ribosomal small subunit binding
GO:0044822 F RNA binding
GO:0070124 P mitochondrial translational initiation
11065 O_BomoMSG19960_5prime_partial:A_BomoMSG_c26560_g1_i2
301bp
 uncharacterized_protein_LOC101740084_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016829 F lyase activity
GO:0043956 F 3-hydroxypropionyl-CoA dehydratase activity
11066 O_BomoMSG19961_complete:A_BomoMSG_c26560_g1_i3
331bp
 uncharacterized_protein_LOC101740084_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016829 F lyase activity
GO:0043956 F 3-hydroxypropionyl-CoA dehydratase activity
11067 O_BomoMSG19962_internal:A_BomoMSG_c26561_g1_i1
362bp
 sulfite_oxidase_isoform_X2_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0006790 P sulfur compound metabolic process
GO:0008482 F sulfite oxidase activity
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0030151 F molybdenum ion binding
GO:0042128 P nitrate assimilation
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
11068 O_BomoMSG19963_5prime_partial:A_BomoMSG_c26561_g1_i1
150bp
11069 O_BomoMSG19964_5prime_partial:A_BomoMSG_c26561_g1_i1
133bp
11070 O_BomoMSG19965_5prime_partial:A_BomoMSG_c26561_g1_i4
175bp
 sulfite_oxidase_isoform_X2_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0006790 P sulfur compound metabolic process
GO:0008482 F sulfite oxidase activity
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0030151 F molybdenum ion binding
GO:0042128 P nitrate assimilation
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
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