Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
11011	O_BomoMSG19911_complete:A_BomoMSG_c26549_g1_i2 101bp	Bomo_Chr5
11012	O_BomoMSG19912_complete:A_BomoMSG_c26550_g1_i3 579bp	Bomo_Chr4	integrator_complex_subunit_10_[Helicoverpa_armigera]	GO:0003674 F molecular_function GO:0005634 C nucleus GO:0016180 P snRNA processing GO:0032039 C integrator complex
11013	O_BomoMSG19913_3prime_partial:A_BomoMSG_c26551_g1_i1 503bp	Bomo_Chr11	cohesin_subunit_SA-2_isoform_X2_[Bombyx_mori]	GO:0000785 C chromatin GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific GO:0003682 F chromatin binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005694 C chromosome GO:0006366 P transcription by RNA polymerase II GO:0007049 P cell cycle GO:0007059 P chromosome segregation GO:0007067 P mitotic cell cycle GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0051301 P cell division
11014	O_BomoMSG19914_5prime_partial:A_BomoMSG_c26551_g1_i1 104bp	Bomo_Chr11
11015	O_BomoMSG19915_internal:A_BomoMSG_c26551_g1_i2 441bp	Bomo_Chr11	cohesin_subunit_SA-2_isoform_X1_[Bombyx_mori]	GO:0000785 C chromatin GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific GO:0003682 F chromatin binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005694 C chromosome GO:0006366 P transcription by RNA polymerase II GO:0007049 P cell cycle GO:0007059 P chromosome segregation GO:0007067 P mitotic cell cycle GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0051301 P cell division
11016	O_BomoMSG19916_5prime_partial:A_BomoMSG_c26551_g1_i2 104bp	Bomo_Chr11
11017	O_BomoMSG19917_complete:A_BomoMSG_c26552_g6_i2 404bp	Bomo_Chr21	MAP_kinse-ERK_kinase_isoform_X1_[Bombyx_mori]	GO:0000165 P MAPK cascade GO:0000166 F nucleotide binding GO:0000187 P obsolete activation of MAPK activity GO:0000793 C condensed chromosome GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity GO:0004708 F MAP kinase kinase activity GO:0004713 F protein tyrosine kinase activity GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005635 C nuclear envelope GO:0005737 C cytoplasm GO:0006468 P protein phosphorylation GO:0007095 P mitotic G2 DNA damage checkpoint signaling GO:0007165 P signal transduction GO:0007275 P multicellular organism development GO:0007298 P border follicle cell migration GO:0007362 P terminal region determination GO:0008595 P anterior/posterior axis specification, embryo GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0018108 P peptidyl-tyrosine phosphorylation GO:0033314 P mitotic DNA replication checkpoint signaling GO:0040018 P positive regulation of multicellular organism growth GO:0042386 P hemocyte differentiation GO:0046579 P positive regulation of Ras protein signal transduction GO:0070374 P positive regulation of ERK1 and ERK2 cascade GO:0071481 P cellular response to X-ray
11018	O_BomoMSG19918_5prime_partial:A_BomoMSG_c26552_g6_i3 378bp	Bomo_Chr21	MAP_kinse-ERK_kinase_[Bombyx_mori]	GO:0000165 P MAPK cascade GO:0000166 F nucleotide binding GO:0000187 P obsolete activation of MAPK activity GO:0000793 C condensed chromosome GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity GO:0004708 F MAP kinase kinase activity GO:0004713 F protein tyrosine kinase activity GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005635 C nuclear envelope GO:0005737 C cytoplasm GO:0006468 P protein phosphorylation GO:0007095 P mitotic G2 DNA damage checkpoint signaling GO:0007165 P signal transduction GO:0007275 P multicellular organism development GO:0007298 P border follicle cell migration GO:0007362 P terminal region determination GO:0008595 P anterior/posterior axis specification, embryo GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0018108 P peptidyl-tyrosine phosphorylation GO:0033314 P mitotic DNA replication checkpoint signaling GO:0040018 P positive regulation of multicellular organism growth GO:0042386 P hemocyte differentiation GO:0046579 P positive regulation of Ras protein signal transduction GO:0070374 P positive regulation of ERK1 and ERK2 cascade GO:0071481 P cellular response to X-ray
11019	O_BomoMSG19919_5prime_partial:A_BomoMSG_c26552_g6_i4 108bp	Bomo_Chr21	MAP_kinse-ERK_kinase_isoform_X1_[Bombyx_mori]	GO:0000165 P MAPK cascade GO:0000166 F nucleotide binding GO:0000187 P obsolete activation of MAPK activity GO:0000793 C condensed chromosome GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity GO:0004708 F MAP kinase kinase activity GO:0004713 F protein tyrosine kinase activity GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005635 C nuclear envelope GO:0005737 C cytoplasm GO:0006468 P protein phosphorylation GO:0007095 P mitotic G2 DNA damage checkpoint signaling GO:0007165 P signal transduction GO:0007275 P multicellular organism development GO:0007298 P border follicle cell migration GO:0007362 P terminal region determination GO:0008595 P anterior/posterior axis specification, embryo GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0018108 P peptidyl-tyrosine phosphorylation GO:0033314 P mitotic DNA replication checkpoint signaling GO:0040018 P positive regulation of multicellular organism growth GO:0042386 P hemocyte differentiation GO:0046579 P positive regulation of Ras protein signal transduction GO:0070374 P positive regulation of ERK1 and ERK2 cascade GO:0071481 P cellular response to X-ray
11020	O_BomoMSG1991_internal:A_BomoMSG_c9737_g1_i1 103bp	Bomo_Chr11	uncharacterized_protein_LOC101740622_[Bombyx_mori]
11021	O_BomoMSG19920_complete:A_BomoMSG_c26553_g2_i1 349bp	Bomo_Chr15	torsin-like_protein_isoform_X1_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0005524 F ATP binding GO:0005635 C nuclear envelope GO:0005783 C endoplasmic reticulum GO:0005788 C endoplasmic reticulum lumen GO:0006457 P protein folding GO:0016887 F ATP hydrolysis activity GO:0040011 P locomotion GO:0042053 P regulation of dopamine metabolic process GO:0043104 P positive regulation of GTP cyclohydrolase I activity GO:0048085 P adult chitin-containing cuticle pigmentation GO:0051085 P chaperone cofactor-dependent protein refolding GO:0071426 P obsolete ribonucleoprotein complex export from nucleus
11022	O_BomoMSG19921_5prime_partial:A_BomoMSG_c26554_g1_i1 683bp	Bomo_Chr16	phosphatidylinositol_4-kinase_alpha_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0004430 F 1-phosphatidylinositol 4-kinase activity GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0016020 C membrane GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0016773 F phosphotransferase activity, alcohol group as acceptor GO:0030660 C Golgi-associated vesicle membrane GO:0046854 P phosphatidylinositol phosphate biosynthetic process GO:0048015 P phosphatidylinositol-mediated signaling
11023	O_BomoMSG19922_complete:A_BomoMSG_c26554_g1_i1 205bp	Bomo_Chr16
11024	O_BomoMSG19923_complete:A_BomoMSG_c26554_g1_i1 138bp	Bomo_Chr16
11025	O_BomoMSG19924_5prime_partial:A_BomoMSG_c26554_g1_i2 832bp	Bomo_Chr16	phosphatidylinositol_4-kinase_alpha_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0004430 F 1-phosphatidylinositol 4-kinase activity GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0016020 C membrane GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0016773 F phosphotransferase activity, alcohol group as acceptor GO:0030660 C Golgi-associated vesicle membrane GO:0046854 P phosphatidylinositol phosphate biosynthetic process GO:0048015 P phosphatidylinositol-mediated signaling
11026	O_BomoMSG19925_complete:A_BomoMSG_c26554_g1_i2 205bp	Bomo_Chr16
11027	O_BomoMSG19926_complete:A_BomoMSG_c26554_g1_i2 138bp	Bomo_Chr16
11028	O_BomoMSG19927_5prime_partial:A_BomoMSG_c26554_g1_i2 126bp	Bomo_Chr16
11029	O_BomoMSG19928_5prime_partial:A_BomoMSG_c26554_g1_i3 593bp	Bomo_Chr16	phosphatidylinositol_4-kinase_alpha_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0004430 F 1-phosphatidylinositol 4-kinase activity GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0016020 C membrane GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0016773 F phosphotransferase activity, alcohol group as acceptor GO:0030660 C Golgi-associated vesicle membrane GO:0046854 P phosphatidylinositol phosphate biosynthetic process GO:0048015 P phosphatidylinositol-mediated signaling
11030	O_BomoMSG19929_3prime_partial:A_BomoMSG_c26554_g1_i3 206bp	Bomo_Chr16
11031	O_BomoMSG1992_internal:A_BomoMSG_c9738_g1_i1 105bp	Bomo_Chr27	microtubule-associated_serine/threonine-protein_kinase_3_isoform_X1_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000287 F magnesium ion binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0005524 F ATP binding GO:0005622 C intracellular anatomical structure GO:0006468 P protein phosphorylation GO:0007010 P cytoskeleton organization GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0018105 P peptidyl-serine phosphorylation GO:0035556 P intracellular signal transduction
11032	O_BomoMSG19930_complete:A_BomoMSG_c26554_g1_i3 138bp	Bomo_Chr16
11033	O_BomoMSG19931_complete:A_BomoMSG_c26555_g1_i3 342bp	Bomo_Chr8	transmembrane_protein_19_isoform_X1_[Bombyx_mori]	GO:0016020 C membrane GO:0016021 C integral component of membrane
11034	O_BomoMSG19932_internal:A_BomoMSG_c26556_g1_i1 101bp	Bomo_Chr6	ER_membrane_protein_complex_subunit_1_isoform_X1_[Bombyx_mori]	GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0034975 P protein folding in endoplasmic reticulum GO:0072546 C EMC complex
11035	O_BomoMSG19933_internal:A_BomoMSG_c26556_g1_i1 101bp	Bomo_Chr6
11036	O_BomoMSG19934_internal:A_BomoMSG_c26556_g1_i1 100bp	Bomo_Chr6
11037	O_BomoMSG19935_internal:A_BomoMSG_c26556_g2_i1 631bp	Bomo_Chr6	ER_membrane_protein_complex_subunit_1_isoform_X2_[Bombyx_mori]	GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0034975 P protein folding in endoplasmic reticulum GO:0072546 C EMC complex
11038	O_BomoMSG19936_internal:A_BomoMSG_c26556_g2_i2 416bp	Bomo_Chr6	ER_membrane_protein_complex_subunit_1_isoform_X2_[Bombyx_mori]	GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0034975 P protein folding in endoplasmic reticulum GO:0072546 C EMC complex
11039	O_BomoMSG19937_internal:A_BomoMSG_c26556_g2_i3 176bp	Bomo_Chr6	ER_membrane_protein_complex_subunit_1_isoform_X1_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005783 C endoplasmic reticulum GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0034975 P protein folding in endoplasmic reticulum GO:0072546 C EMC complex
11040	O_BomoMSG19938_5prime_partial:A_BomoMSG_c26556_g2_i3 119bp	Bomo_Chr6