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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10711 O_BomoMSG19641_internal:A_BomoMSG_c26482_g2_i5
422bp
 PREDICTED:_protein_piccolo_[Papilio_xuthus]
10712 O_BomoMSG19642_complete:A_BomoMSG_c26482_g2_i5
175bp
10713 O_BomoMSG19643_complete:A_BomoMSG_c26482_g2_i5
146bp
10714 O_BomoMSG19644_5prime_partial:A_BomoMSG_c26482_g2_i5
101bp
10715 O_BomoMSG19645_internal:A_BomoMSG_c26483_g1_i1
644bp
 nitrogen_permease_regulator_3-like_protein_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0007293 P germarium-derived egg chamber formation
GO:0032007 P negative regulation of TOR signaling
GO:0034198 P cellular response to amino acid starvation
GO:0035859 C Seh1-associated complex
GO:0038202 P TORC1 signaling
GO:0044754 C autolysosome
GO:0045792 P negative regulation of cell size
GO:0048477 P oogenesis
10716 O_BomoMSG19646_complete:A_BomoMSG_c26483_g1_i1
149bp
10717 O_BomoMSG19647_complete:A_BomoMSG_c26483_g1_i1
127bp
10718 O_BomoMSG19648_complete:A_BomoMSG_c26483_g1_i1
115bp
10719 O_BomoMSG19649_internal:A_BomoMSG_c26483_g1_i2
187bp
 nitrogen_permease_regulator_3-like_protein_[Helicoverpa_armigera]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0007293 P germarium-derived egg chamber formation
GO:0032007 P negative regulation of TOR signaling
GO:0034198 P cellular response to amino acid starvation
GO:0035859 C Seh1-associated complex
GO:0038202 P TORC1 signaling
GO:0044754 C autolysosome
GO:0045792 P negative regulation of cell size
GO:0048477 P oogenesis
10720 O_BomoMSG1964_internal:A_BomoMSG_c9597_g1_i1
206bp
 nesprin-1_isoform_X1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0006997 P nucleus organization
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030017 C sarcomere
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0040023 P nuclear migration
GO:0042692 P muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0051015 F actin filament binding
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
10721 O_BomoMSG19650_complete:A_BomoMSG_c26483_g1_i2
127bp
10722 O_BomoMSG19651_5prime_partial:A_BomoMSG_c26483_g1_i3
268bp
 nitrogen_permease_regulator_3-like_protein_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0007293 P germarium-derived egg chamber formation
GO:0032007 P negative regulation of TOR signaling
GO:0034198 P cellular response to amino acid starvation
GO:0035859 C Seh1-associated complex
GO:0038202 P TORC1 signaling
GO:0044754 C autolysosome
GO:0045792 P negative regulation of cell size
GO:0048477 P oogenesis
10723 O_BomoMSG19652_3prime_partial:A_BomoMSG_c26483_g2_i1
111bp
 nitrogen_permease_regulator_3-like_protein_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0007293 P germarium-derived egg chamber formation
GO:0032007 P negative regulation of TOR signaling
GO:0034198 P cellular response to amino acid starvation
GO:0035859 C Seh1-associated complex
GO:0038202 P TORC1 signaling
GO:0044754 C autolysosome
GO:0045792 P negative regulation of cell size
GO:0048477 P oogenesis
10724 O_BomoMSG19653_5prime_partial:A_BomoMSG_c26485_g1_i2
601bp
 sterol_regulatory_element-binding_protein_1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000139 C Golgi membrane
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000982 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003062 P regulation of heart rate by chemical signal
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006629 P lipid metabolic process
GO:0007568 P aging
GO:0007623 P circadian rhythm
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008286 P insulin receptor signaling pathway
GO:0008610 P lipid biosynthetic process
GO:0009267 P cellular response to starvation
GO:0009749 P response to glucose
GO:0010867 P positive regulation of triglyceride biosynthetic process
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0014070 P response to organic cyclic compound
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019217 P regulation of fatty acid metabolic process
GO:0019901 F protein kinase binding
GO:0030324 P lung development
GO:0031065 P positive regulation of histone deacetylation
GO:0031410 C cytoplasmic vesicle
GO:0031647 P regulation of protein stability
GO:0032094 P response to food
GO:0032403 F protein-containing complex binding
GO:0032526 P response to retinoic acid
GO:0032570 P response to progesterone
GO:0032810 F sterol response element binding
GO:0032869 P cellular response to insulin stimulus
GO:0033762 P response to glucagon
GO:0033993 P response to lipid
GO:0042493 P response to xenobiotic stimulus
GO:0042789 P mRNA transcription by RNA polymerase II
GO:0043231 C intracellular membrane-bounded organelle
GO:0043234 C protein-containing complex
GO:0043434 P response to peptide hormone
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045444 P fat cell differentiation
GO:0045542 P positive regulation of cholesterol biosynthetic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046676 P negative regulation of insulin secretion
GO:0046983 F protein dimerization activity
GO:0050796 P regulation of insulin secretion
GO:0051591 P response to cAMP
GO:0070542 P response to fatty acid
GO:0071398 P cellular response to fatty acid
GO:1903146 P regulation of autophagy of mitochondrion
GO:1903214 P regulation of protein targeting to mitochondrion
10725 O_BomoMSG19654_5prime_partial:A_BomoMSG_c26485_g1_i3
624bp
 sterol_regulatory_element-binding_protein_1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000139 C Golgi membrane
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000982 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003062 P regulation of heart rate by chemical signal
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006629 P lipid metabolic process
GO:0007568 P aging
GO:0007623 P circadian rhythm
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008286 P insulin receptor signaling pathway
GO:0008610 P lipid biosynthetic process
GO:0009267 P cellular response to starvation
GO:0009749 P response to glucose
GO:0010867 P positive regulation of triglyceride biosynthetic process
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0014070 P response to organic cyclic compound
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019217 P regulation of fatty acid metabolic process
GO:0019901 F protein kinase binding
GO:0030324 P lung development
GO:0031065 P positive regulation of histone deacetylation
GO:0031410 C cytoplasmic vesicle
GO:0031647 P regulation of protein stability
GO:0032094 P response to food
GO:0032403 F protein-containing complex binding
GO:0032526 P response to retinoic acid
GO:0032570 P response to progesterone
GO:0032810 F sterol response element binding
GO:0032869 P cellular response to insulin stimulus
GO:0033762 P response to glucagon
GO:0033993 P response to lipid
GO:0042493 P response to xenobiotic stimulus
GO:0042789 P mRNA transcription by RNA polymerase II
GO:0043231 C intracellular membrane-bounded organelle
GO:0043234 C protein-containing complex
GO:0043434 P response to peptide hormone
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045444 P fat cell differentiation
GO:0045542 P positive regulation of cholesterol biosynthetic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046676 P negative regulation of insulin secretion
GO:0046983 F protein dimerization activity
GO:0050796 P regulation of insulin secretion
GO:0051591 P response to cAMP
GO:0070542 P response to fatty acid
GO:0071398 P cellular response to fatty acid
GO:1903146 P regulation of autophagy of mitochondrion
GO:1903214 P regulation of protein targeting to mitochondrion
10726 O_BomoMSG19655_3prime_partial:A_BomoMSG_c26485_g2_i1
450bp
 sterol_regulatory_element-binding_protein_1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000139 C Golgi membrane
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000982 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003062 P regulation of heart rate by chemical signal
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006629 P lipid metabolic process
GO:0007568 P aging
GO:0007623 P circadian rhythm
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008286 P insulin receptor signaling pathway
GO:0008610 P lipid biosynthetic process
GO:0009267 P cellular response to starvation
GO:0009749 P response to glucose
GO:0010867 P positive regulation of triglyceride biosynthetic process
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0014070 P response to organic cyclic compound
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019217 P regulation of fatty acid metabolic process
GO:0019901 F protein kinase binding
GO:0030324 P lung development
GO:0031065 P positive regulation of histone deacetylation
GO:0031410 C cytoplasmic vesicle
GO:0031647 P regulation of protein stability
GO:0032094 P response to food
GO:0032403 F protein-containing complex binding
GO:0032526 P response to retinoic acid
GO:0032570 P response to progesterone
GO:0032810 F sterol response element binding
GO:0032869 P cellular response to insulin stimulus
GO:0033762 P response to glucagon
GO:0033993 P response to lipid
GO:0042493 P response to xenobiotic stimulus
GO:0042789 P mRNA transcription by RNA polymerase II
GO:0043231 C intracellular membrane-bounded organelle
GO:0043234 C protein-containing complex
GO:0043434 P response to peptide hormone
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045444 P fat cell differentiation
GO:0045542 P positive regulation of cholesterol biosynthetic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046676 P negative regulation of insulin secretion
GO:0046983 F protein dimerization activity
GO:0050796 P regulation of insulin secretion
GO:0051591 P response to cAMP
GO:0070542 P response to fatty acid
GO:0071398 P cellular response to fatty acid
GO:1903146 P regulation of autophagy of mitochondrion
GO:1903214 P regulation of protein targeting to mitochondrion
10727 O_BomoMSG19656_complete:A_BomoMSG_c26485_g2_i1
103bp
10728 O_BomoMSG19657_5prime_partial:A_BomoMSG_c26486_g1_i1
407bp
 probable_RNA_3'-terminal_phosphate_cyclase-like_protein_[Bombyx_mori]
GO:0000480 P endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003963 F RNA-3'-phosphate cyclase activity
GO:0004521 F endoribonuclease activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006396 P RNA processing
GO:0009267 P cellular response to starvation
GO:0042254 P ribosome biogenesis
10729 O_BomoMSG19658_5prime_partial:A_BomoMSG_c26486_g1_i2
327bp
 probable_RNA_3'-terminal_phosphate_cyclase-like_protein_[Bombyx_mori]
GO:0000480 P endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003963 F RNA-3'-phosphate cyclase activity
GO:0004521 F endoribonuclease activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006396 P RNA processing
GO:0009267 P cellular response to starvation
GO:0042254 P ribosome biogenesis
10730 O_BomoMSG19659_complete:A_BomoMSG_c26487_g1_i1
217bp
 uncharacterized_protein_LOC101740009_[Bombyx_mori]
GO:0003743 F translation initiation factor activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0008135 F translation factor activity, RNA binding
GO:0032790 P ribosome disassembly
GO:0043024 F ribosomal small subunit binding
GO:0070124 P mitochondrial translational initiation
10731 O_BomoMSG1965_complete:A_BomoMSG_c9601_g1_i1
212bp
 class_A_basic_helix-loop-helix_protein_15-like_[Bombyx_mori]
GO:0002793 P positive regulation of peptide secretion
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007419 P ventral cord development
GO:0030154 P cell differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046887 P positive regulation of hormone secretion
GO:0046983 F protein dimerization activity
GO:0061101 P neuroendocrine cell differentiation
10732 O_BomoMSG19660_5prime_partial:A_BomoMSG_c26487_g1_i2
114bp
 uncharacterized_protein_LOC101740009_[Bombyx_mori]
10733 O_BomoMSG19661_complete:A_BomoMSG_c26488_g1_i2
100bp
10734 O_BomoMSG19662_internal:A_BomoMSG_c26489_g1_i1
588bp
 cadherin-23_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006816 P calcium ion transport
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007601 P visual perception
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0032420 C stereocilium
GO:0045494 P photoreceptor cell maintenance
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
GO:0050953 P sensory perception of light stimulus
GO:0050957 P equilibrioception
GO:0051480 P regulation of cytosolic calcium ion concentration
GO:0060122 P inner ear receptor cell stereocilium organization
10735 O_BomoMSG19663_complete:A_BomoMSG_c26489_g1_i1
103bp
10736 O_BomoMSG19664_internal:A_BomoMSG_c26489_g1_i2
725bp
 cadherin-23_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006816 P calcium ion transport
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007601 P visual perception
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0032420 C stereocilium
GO:0045494 P photoreceptor cell maintenance
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
GO:0050953 P sensory perception of light stimulus
GO:0050957 P equilibrioception
GO:0051480 P regulation of cytosolic calcium ion concentration
GO:0060122 P inner ear receptor cell stereocilium organization
10737 O_BomoMSG19665_complete:A_BomoMSG_c26489_g1_i2
103bp
10738 O_BomoMSG19666_5prime_partial:A_BomoMSG_c26491_g1_i1
603bp
 solute_carrier_organic_anion_transporter_family_member_5A1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0015347 F sodium-independent organic anion transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0043252 P sodium-independent organic anion transport
10739 O_BomoMSG19667_complete:A_BomoMSG_c26491_g1_i1
176bp
10740 O_BomoMSG19668_complete:A_BomoMSG_c26491_g1_i1
170bp
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