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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10681 O_BomoMSG19614_complete:A_BomoMSG_c26476_g1_i4
156bp
10682 O_BomoMSG19615_complete:A_BomoMSG_c26476_g1_i4
133bp
10683 O_BomoMSG19616_complete:A_BomoMSG_c26476_g1_i4
131bp
10684 O_BomoMSG19617_complete:A_BomoMSG_c26476_g1_i4
119bp
10685 O_BomoMSG19618_complete:A_BomoMSG_c26476_g1_i4
101bp
10686 O_BomoMSG19619_5prime_partial:A_BomoMSG_c26478_g1_i2
163bp
 ubiquitin-conjugating_enzyme_E2_W_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006513 P protein monoubiquitination
GO:0006515 P protein quality control for misfolded or incompletely synthesized proteins
GO:0006974 P cellular response to DNA damage stimulus
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
GO:0071218 P cellular response to misfolded protein
10687 O_BomoMSG1961_internal:A_BomoMSG_c9585_g1_i1
105bp
10688 O_BomoMSG19620_5prime_partial:A_BomoMSG_c26478_g1_i3
104bp
 ubiquitin-conjugating_enzyme_E2_W_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006513 P protein monoubiquitination
GO:0006515 P protein quality control for misfolded or incompletely synthesized proteins
GO:0006974 P cellular response to DNA damage stimulus
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
GO:0071218 P cellular response to misfolded protein
10689 O_BomoMSG19621_internal:A_BomoMSG_c26479_g1_i1
158bp
 uncharacterized_protein_LOC101745370_isoform_X2_[Bombyx_mori]
10690 O_BomoMSG19622_internal:A_BomoMSG_c26479_g1_i2
464bp
 uncharacterized_protein_LOC101745370_isoform_X2_[Bombyx_mori]
10691 O_BomoMSG19623_3prime_partial:A_BomoMSG_c26479_g1_i3
487bp
 uncharacterized_protein_LOC101745370_isoform_X2_[Bombyx_mori]
10692 O_BomoMSG19624_5prime_partial:A_BomoMSG_c26481_g1_i2
212bp
 uncharacterized_protein_LOC101743491_isoform_X2_[Bombyx_mori]
10693 O_BomoMSG19625_5prime_partial:A_BomoMSG_c26481_g1_i5
256bp
 uncharacterized_protein_LOC101743491_isoform_X2_[Bombyx_mori]
10694 O_BomoMSG19626_internal:A_BomoMSG_c26482_g1_i1
486bp
 nuclear_receptor_coactivator_6-like,_partial_[Bombyx_mori]
10695 O_BomoMSG19627_3prime_partial:A_BomoMSG_c26482_g2_i1
147bp
 PREDICTED:_uncharacterized_protein_LOC106102816_[Papilio_polytes]
10696 O_BomoMSG19628_5prime_partial:A_BomoMSG_c26482_g2_i1
101bp
10697 O_BomoMSG19629_5prime_partial:A_BomoMSG_c26482_g2_i1
100bp
10698 O_BomoMSG1962_internal:A_BomoMSG_c9588_g1_i1
152bp
 dicer-2_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0003727 F single-stranded RNA binding
GO:0004386 F helicase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004525 F ribonuclease III activity
GO:0004530 F deoxyribonuclease I activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006309 P apoptotic DNA fragmentation
GO:0006396 P RNA processing
GO:0007279 P pole cell formation
GO:0007294 P germarium-derived oocyte fate determination
GO:0007367 P segment polarity determination
GO:0016246 P RNA interference
GO:0016442 C RISC complex
GO:0016443 F bidentate ribonuclease III activity
GO:0016787 F hydrolase activity
GO:0016891 F endoribonuclease activity, producing 5'-phosphomonoesters
GO:0030422 P production of siRNA involved in RNA interference
GO:0030727 P germarium-derived female germ-line cyst formation
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0033227 P dsRNA transport
GO:0035087 P siRNA loading onto RISC involved in RNA interference
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0042078 P germ-line stem cell division
GO:0042594 P response to starvation
GO:0045448 P mitotic cell cycle, embryonic
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
GO:0070883 F pre-miRNA binding
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
10699 O_BomoMSG19630_internal:A_BomoMSG_c26482_g2_i2
400bp
 PREDICTED:_protein_piccolo_[Papilio_xuthus]
10700 O_BomoMSG19631_complete:A_BomoMSG_c26482_g2_i2
175bp
10701 O_BomoMSG19632_complete:A_BomoMSG_c26482_g2_i2
146bp
10702 O_BomoMSG19633_5prime_partial:A_BomoMSG_c26482_g2_i2
101bp
10703 O_BomoMSG19634_internal:A_BomoMSG_c26482_g2_i3
223bp
 PREDICTED:_uncharacterized_protein_LOC106102816_[Papilio_polytes]
10704 O_BomoMSG19635_5prime_partial:A_BomoMSG_c26482_g2_i3
101bp
10705 O_BomoMSG19636_internal:A_BomoMSG_c26482_g2_i4
490bp
 nuclear_receptor_coactivator_6-like,_partial_[Bombyx_mori]
10706 O_BomoMSG19637_complete:A_BomoMSG_c26482_g2_i4
175bp
10707 O_BomoMSG19638_complete:A_BomoMSG_c26482_g2_i4
146bp
10708 O_BomoMSG19639_5prime_partial:A_BomoMSG_c26482_g2_i4
101bp
10709 O_BomoMSG1963_5prime_partial:A_BomoMSG_c9590_g1_i1
128bp
 DENN_domain-containing_protein_4C_isoform_X4_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0043547 P positive regulation of GTPase activity
10710 O_BomoMSG19640_internal:A_BomoMSG_c26482_g1_i2
457bp
 nuclear_receptor_coactivator_6-like,_partial_[Bombyx_mori]
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