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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10651 O_BomoMSG19588_internal:A_BomoMSG_c26474_g2_i2
359bp
 DNA_repair_and_recombination_protein_RAD54-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000724 P double-strand break repair via homologous recombination
GO:0000733 P obsolete DNA strand renaturation
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007126 P meiotic cell cycle
GO:0008340 P determination of adult lifespan
GO:0010212 P response to ionizing radiation
GO:0016787 F hydrolase activity
GO:0036310 F ATP-dependent DNA/DNA annealing activity
GO:0042493 P response to xenobiotic stimulus
GO:0051276 P chromosome organization
10652 O_BomoMSG19589_complete:A_BomoMSG_c26474_g2_i2
106bp
10653 O_BomoMSG1958_internal:A_BomoMSG_c9573_g1_i1
209bp
10654 O_BomoMSG19590_complete:A_BomoMSG_c26475_g1_i1
396bp
 uncharacterized_protein_LOC101740299_[Bombyx_mori]
10655 O_BomoMSG19591_complete:A_BomoMSG_c26475_g1_i2
472bp
 teneurin-2_[Bombyx_mori]
GO:0004872 F signaling receptor activity
GO:0005178 F integrin binding
GO:0006954 P inflammatory response
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0008305 C integrin complex
GO:0009897 C external side of plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0043235 C receptor complex
GO:0070062 C extracellular exosome
10656 O_BomoMSG19592_complete:A_BomoMSG_c26475_g1_i2
102bp
10657 O_BomoMSG19593_complete:A_BomoMSG_c26475_g1_i4
370bp
 uncharacterized_protein_LOC101740299_[Bombyx_mori]
10658 O_BomoMSG19594_complete:A_BomoMSG_c26475_g1_i6
396bp
 uncharacterized_protein_LOC101740299_[Bombyx_mori]
10659 O_BomoMSG19595_3prime_partial:A_BomoMSG_c26476_g1_i1
1299bp
 nesprin-1_isoform_X3_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0006997 P nucleus organization
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030017 C sarcomere
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0040023 P nuclear migration
GO:0042692 P muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0051015 F actin filament binding
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
10660 O_BomoMSG19596_5prime_partial:A_BomoMSG_c26476_g1_i1
386bp
10661 O_BomoMSG19597_complete:A_BomoMSG_c26476_g1_i1
156bp
10662 O_BomoMSG19598_complete:A_BomoMSG_c26476_g1_i1
120bp
10663 O_BomoMSG19599_internal:A_BomoMSG_c26476_g1_i2
3581bp
 uncharacterized_protein_LOC110381285_isoform_X2_[Helicoverpa_armigera]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0006997 P nucleus organization
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030017 C sarcomere
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0040023 P nuclear migration
GO:0042692 P muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0051015 F actin filament binding
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
10664 O_BomoMSG1959_internal:A_BomoMSG_c9585_g1_i1
106bp
10665 O_BomoMSG195_5prime_partial:A_BomoMSG_c847_g1_i1
207bp
 PREDICTED:_piggyBac_transposable_element-derived_protein_4-like_[Papilio_xuthus]
10666 O_BomoMSG19600_5prime_partial:A_BomoMSG_c26476_g1_i2
216bp
10667 O_BomoMSG19601_complete:A_BomoMSG_c26476_g1_i2
156bp
10668 O_BomoMSG19602_complete:A_BomoMSG_c26476_g1_i2
133bp
10669 O_BomoMSG19603_complete:A_BomoMSG_c26476_g1_i2
131bp
10670 O_BomoMSG19604_complete:A_BomoMSG_c26476_g1_i2
119bp
10671 O_BomoMSG19605_complete:A_BomoMSG_c26476_g1_i2
101bp
10672 O_BomoMSG19606_internal:A_BomoMSG_c26476_g2_i1
313bp
 uncharacterized_protein_LOC110384740_[Bombyx_mori]
10673 O_BomoMSG19607_internal:A_BomoMSG_c26476_g1_i3
1681bp
 nesprin-1_isoform_X1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0006997 P nucleus organization
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030017 C sarcomere
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0040023 P nuclear migration
GO:0042692 P muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0051015 F actin filament binding
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
10674 O_BomoMSG19608_5prime_partial:A_BomoMSG_c26476_g1_i3
386bp
10675 O_BomoMSG19609_complete:A_BomoMSG_c26476_g1_i3
156bp
10676 O_BomoMSG1960_internal:A_BomoMSG_c9585_g1_i1
105bp
 zinc_finger_protein_OZF_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
10677 O_BomoMSG19610_complete:A_BomoMSG_c26476_g1_i3
131bp
10678 O_BomoMSG19611_complete:A_BomoMSG_c26476_g1_i3
101bp
10679 O_BomoMSG19612_internal:A_BomoMSG_c26476_g1_i4
3751bp
 uncharacterized_protein_LOC110381285_isoform_X4_[Helicoverpa_armigera]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0006997 P nucleus organization
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030017 C sarcomere
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0040023 P nuclear migration
GO:0042692 P muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0051015 F actin filament binding
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
10680 O_BomoMSG19613_5prime_partial:A_BomoMSG_c26476_g1_i4
386bp
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