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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1051 O_BomoMSG10947_3prime_partial:A_BomoMSG_c23009_g1_i3
219bp
 nipped-B-like_protein_A_[Bombyx_mori]
GO:0003146 P heart jogging
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0006412 P translation
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0007417 P central nervous system development
GO:0007507 P heart development
GO:0009303 P rRNA transcription
GO:0010468 P regulation of gene expression
GO:0035118 P embryonic pectoral fin morphogenesis
GO:0048565 P digestive tract development
GO:0048703 P embryonic viscerocranium morphogenesis
GO:0060828 P regulation of canonical Wnt signaling pathway
GO:0071733 P obsolete transcriptional activation by promoter-enhancer looping
1052 O_BomoMSG10948_complete:A_BomoMSG_c23009_g1_i3
111bp
1053 O_BomoMSG10949_5prime_partial:A_BomoMSG_c23010_g1_i1
280bp
 activating_signal_cointegrator_1_complex_subunit_2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
1054 O_BomoMSG1094_internal:A_BomoMSG_c5140_g2_i1
111bp
 protein_sprint_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005938 C cell cortex
GO:0006897 P endocytosis
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007298 P border follicle cell migration
GO:0017016 F small GTPase binding
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0019901 F protein kinase binding
GO:0030139 C endocytic vesicle
GO:0030971 F receptor tyrosine kinase binding
GO:0032483 P regulation of Rab protein signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0048675 P axon extension
1055 O_BomoMSG10950_5prime_partial:A_BomoMSG_c23010_g1_i1
224bp
1056 O_BomoMSG10951_3prime_partial:A_BomoMSG_c23011_g1_i1
264bp
 serine/arginine_repetitive_matrix_protein_1_isoform_X1_[Bombyx_mori]
1057 O_BomoMSG10952_3prime_partial:A_BomoMSG_c23011_g1_i2
264bp
 serine/arginine_repetitive_matrix_protein_1_isoform_X1_[Bombyx_mori]
1058 O_BomoMSG10953_3prime_partial:A_BomoMSG_c23011_g1_i3
264bp
 serine/arginine_repetitive_matrix_protein_1_isoform_X1_[Bombyx_mori]
1059 O_BomoMSG10954_internal:A_BomoMSG_c23011_g1_i4
235bp
 serine/arginine_repetitive_matrix_protein_1_isoform_X2_[Bombyx_mori]
1060 O_BomoMSG10955_3prime_partial:A_BomoMSG_c23011_g1_i5
264bp
 serine/arginine_repetitive_matrix_protein_1_isoform_X1_[Bombyx_mori]
1061 O_BomoMSG10956_internal:A_BomoMSG_c23012_g1_i2
101bp
1062 O_BomoMSG10957_3prime_partial:A_BomoMSG_c23013_g1_i1
185bp
1063 O_BomoMSG10958_5prime_partial:A_BomoMSG_c23013_g1_i1
128bp
1064 O_BomoMSG10959_5prime_partial:A_BomoMSG_c23013_g1_i1
126bp
 luc7-like_protein_3_[Bombyx_mori]
1065 O_BomoMSG1095_3prime_partial:A_BomoMSG_c5145_g1_i1
161bp
 uncharacterized_protein_LOC101745573_[Bombyx_mori]
1066 O_BomoMSG10960_complete:A_BomoMSG_c23013_g1_i2
383bp
 luc7-like_protein_3_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
1067 O_BomoMSG10961_complete:A_BomoMSG_c23013_g1_i2
211bp
1068 O_BomoMSG10962_complete:A_BomoMSG_c23013_g1_i2
142bp
1069 O_BomoMSG10963_3prime_partial:A_BomoMSG_c23013_g1_i3
117bp
 luc7-like_protein_3_[Bombyx_mori]
1070 O_BomoMSG10964_complete:A_BomoMSG_c23013_g1_i4
383bp
 luc7-like_protein_3_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
1071 O_BomoMSG10965_complete:A_BomoMSG_c23013_g1_i4
142bp
1072 O_BomoMSG10966_3prime_partial:A_BomoMSG_c23014_g1_i1
294bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101743924_[Bombyx_mori]
1073 O_BomoMSG10967_5prime_partial:A_BomoMSG_c23014_g1_i2
107bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101743924_[Bombyx_mori]
1074 O_BomoMSG10968_internal:A_BomoMSG_c23014_g1_i3
128bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101743924_[Bombyx_mori]
1075 O_BomoMSG10969_complete:A_BomoMSG_c23016_g1_i1
101bp
1076 O_BomoMSG1096_internal:A_BomoMSG_c5153_g1_i1
127bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Amyelois_transitella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
1077 O_BomoMSG10970_3prime_partial:A_BomoMSG_c23017_g1_i1
203bp
 pro-epidermal_growth_factor_[Bombyx_mori]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000139 C Golgi membrane
GO:0003015 P heart process
GO:0005154 F epidermal growth factor receptor binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007298 P border follicle cell migration
GO:0007399 P nervous system development
GO:0007421 P stomatogastric nervous system development
GO:0007422 P peripheral nervous system development
GO:0007424 P open tracheal system development
GO:0007432 P salivary gland boundary specification
GO:0007438 P oenocyte development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008284 P positive regulation of cell population proliferation
GO:0008317 F gurken receptor binding
GO:0008355 P olfactory learning
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016330 P second mitotic wave involved in compound eye morphogenesis
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0035225 P determination of genital disc primordium
GO:0035277 P spiracle morphogenesis, open tracheal system
GO:0043066 P negative regulation of apoptotic process
GO:0045470 P R8 cell-mediated photoreceptor organization
GO:0045742 P positive regulation of epidermal growth factor receptor signaling pathway
GO:0046673 P negative regulation of compound eye retinal cell programmed cell death
GO:0046845 P branched duct epithelial cell fate determination, open tracheal system
GO:0048149 P behavioral response to ethanol
GO:0048865 P stem cell fate commitment
GO:0050769 P positive regulation of neurogenesis
GO:0061331 P epithelial cell proliferation involved in Malpighian tubule morphogenesis
1078 O_BomoMSG10971_5prime_partial:A_BomoMSG_c23018_g1_i1
150bp
1079 O_BomoMSG10972_3prime_partial:A_BomoMSG_c23018_g1_i1
129bp
 telomere-associated_protein_RIF1_[Bombyx_mori]
1080 O_BomoMSG10973_3prime_partial:A_BomoMSG_c23019_g1_i1
176bp
 unc-50-like_protein_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030173 C integral component of Golgi membrane
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