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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1081 O_BomoMSG10974_5prime_partial:A_BomoMSG_c23019_g2_i1
113bp
1082 O_BomoMSG10975_5prime_partial:A_BomoMSG_c23019_g2_i1
100bp
 unc-50-like_protein_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030173 C integral component of Golgi membrane
1083 O_BomoMSG10976_internal:A_BomoMSG_c23021_g1_i1
291bp
 N-alpha-acetyltransferase_35,_NatC_auxiliary_subunit_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0031417 C NatC complex
GO:0043066 P negative regulation of apoptotic process
GO:0048659 P smooth muscle cell proliferation
1084 O_BomoMSG10977_internal:A_BomoMSG_c23021_g1_i2
235bp
 N-alpha-acetyltransferase_35,_NatC_auxiliary_subunit_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0031417 C NatC complex
GO:0043066 P negative regulation of apoptotic process
GO:0048659 P smooth muscle cell proliferation
1085 O_BomoMSG10978_complete:A_BomoMSG_c23022_g1_i1
122bp
 uncharacterized_protein_LOC100141456_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0009060 P aerobic respiration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031966 C mitochondrial membrane
GO:0033617 P mitochondrial cytochrome c oxidase assembly
1086 O_BomoMSG10979_5prime_partial:A_BomoMSG_c23023_g1_i1
256bp
 uncharacterized_protein_LOC101744334_[Bombyx_mori]
1087 O_BomoMSG1097_5prime_partial:A_BomoMSG_c5158_g1_i1
297bp
 transmembrane_protein_205_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0070062 C extracellular exosome
1088 O_BomoMSG10980_internal:A_BomoMSG_c23024_g1_i1
132bp
 uncharacterized_protein_LOC101745877_isoform_X2_[Bombyx_mori]
1089 O_BomoMSG10981_internal:A_BomoMSG_c23024_g1_i2
512bp
 uncharacterized_protein_LOC101745877_isoform_X2_[Bombyx_mori]
1090 O_BomoMSG10982_complete:A_BomoMSG_c23025_g1_i1
220bp
 mediator_of_RNA_polymerase_II_transcription_subunit_7_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016592 C mediator complex
GO:0070847 C core mediator complex
1091 O_BomoMSG10983_3prime_partial:A_BomoMSG_c23026_g1_i1
345bp
 39S_ribosomal_protein_L3,_mitochondrial_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
1092 O_BomoMSG10984_internal:A_BomoMSG_c23030_g1_i1
113bp
1093 O_BomoMSG10985_internal:A_BomoMSG_c23030_g1_i1
113bp
 probable_phospholipid-transporting_ATPase_IIB_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004012 F ATPase-coupled intramembrane lipid transporter activity
GO:0005524 F ATP binding
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005886 C plasma membrane
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006897 P endocytosis
GO:0008152 P metabolic process
GO:0015914 P phospholipid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0031901 C early endosome membrane
GO:0045332 P phospholipid translocation
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0055037 C recycling endosome
1094 O_BomoMSG10986_internal:A_BomoMSG_c23030_g1_i1
113bp
1095 O_BomoMSG10987_internal:A_BomoMSG_c23030_g1_i1
113bp
1096 O_BomoMSG10988_internal:A_BomoMSG_c23030_g2_i1
257bp
 probable_phospholipid-transporting_ATPase_IIB_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004012 F ATPase-coupled intramembrane lipid transporter activity
GO:0005524 F ATP binding
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005886 C plasma membrane
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006897 P endocytosis
GO:0008152 P metabolic process
GO:0015914 P phospholipid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0045332 P phospholipid translocation
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0072600 P protein localization to Golgi apparatus
1097 O_BomoMSG10989_5prime_partial:A_BomoMSG_c23030_g2_i1
172bp
1098 O_BomoMSG1098_complete:A_BomoMSG_c5158_g1_i1
165bp
1099 O_BomoMSG10990_5prime_partial:A_BomoMSG_c23030_g2_i1
131bp
1100 O_BomoMSG10991_complete:A_BomoMSG_c23032_g1_i1
1096bp
 aminopeptidase_N-like_isoform_X1_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0001618 F virus receptor activity
GO:0004177 F aminopeptidase activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0042277 F peptide binding
GO:0043171 P peptide catabolic process
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0070006 F metalloaminopeptidase activity
1101 O_BomoMSG10992_complete:A_BomoMSG_c23032_g1_i1
119bp
1102 O_BomoMSG10993_complete:A_BomoMSG_c23032_g1_i2
1096bp
 aminopeptidase_N-like_isoform_X1_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0001618 F virus receptor activity
GO:0004177 F aminopeptidase activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0042277 F peptide binding
GO:0043171 P peptide catabolic process
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0070006 F metalloaminopeptidase activity
1103 O_BomoMSG10994_complete:A_BomoMSG_c23032_g1_i2
119bp
1104 O_BomoMSG10995_5prime_partial:A_BomoMSG_c23033_g1_i1
438bp
 pumilio_homolog_2_isoform_X2_[Bombyx_mori]
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000900 F translation repressor activity, mRNA regulatory element binding
GO:0001709 P cell fate determination
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0007067 P mitotic cell cycle
GO:0007268 P chemical synaptic transmission
GO:0007275 P multicellular organism development
GO:0007280 P pole cell migration
GO:0007281 P germ cell development
GO:0007616 P long-term memory
GO:0008258 P head involution
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0008595 P anterior/posterior axis specification, embryo
GO:0016441 P posttranscriptional gene silencing
GO:0016477 P cell migration
GO:0017148 P negative regulation of translation
GO:0031594 C neuromuscular junction
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0042078 P germ-line stem cell division
GO:0045727 P positive regulation of translation
GO:0045786 P negative regulation of cell cycle
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0048149 P behavioral response to ethanol
GO:0048477 P oogenesis
GO:0048813 P dendrite morphogenesis
GO:0050804 P modulation of chemical synaptic transmission
GO:0060213 P positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
GO:0061176 C type Ib terminal bouton
GO:0061177 C type Is terminal bouton
GO:0097482 C muscle cell postsynaptic specialization
1105 O_BomoMSG10996_complete:A_BomoMSG_c23033_g1_i1
172bp
1106 O_BomoMSG10997_complete:A_BomoMSG_c23033_g1_i1
164bp
1107 O_BomoMSG10998_3prime_partial:A_BomoMSG_c23033_g1_i1
147bp
1108 O_BomoMSG10999_3prime_partial:A_BomoMSG_c23034_g1_i1
324bp
 nuclear_pore_complex_protein_Nup205_[Bombyx_mori]
GO:0000059 P obsolete protein import into nucleus, docking
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0007077 P mitotic nuclear membrane disassembly
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0017056 F structural constituent of nuclear pore
GO:0019083 P viral transcription
GO:0031047 P gene silencing by RNA
GO:0031965 C nuclear membrane
GO:0034399 C nuclear periphery
GO:0044611 C nuclear pore inner ring
GO:0051028 P mRNA transport
GO:0051292 P nuclear pore complex assembly
GO:0075733 P intracellular transport of virus
GO:1900034 P regulation of cellular response to heat
1109 O_BomoMSG1099_internal:A_BomoMSG_c5164_g1_i1
99bp
conserved_hypothetical_protein_[Xanthomonas_citri_subsp._citri]
1110 O_BomoMSG109_complete:A_BomoMSG_c394_g2_i1
113bp
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