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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1021 O_BomoMSG1091_complete:A_BomoMSG_c5115_g1_i1
104bp
1022 O_BomoMSG10920_complete:A_BomoMSG_c22998_g1_i4
602bp
 ATP-binding_cassette_sub-family_B_member_7,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006810 P transport
GO:0006879 P cellular iron ion homeostasis
GO:0008152 P metabolic process
GO:0015232 F heme transmembrane transporter activity
GO:0015886 P heme transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
1023 O_BomoMSG10921_complete:A_BomoMSG_c22998_g1_i4
520bp
 hypothetical_protein_P355_2306_[Burkholderia_cenocepacia_KC-01]
1024 O_BomoMSG10922_complete:A_BomoMSG_c22998_g1_i4
248bp
1025 O_BomoMSG10923_complete:A_BomoMSG_c22998_g1_i4
209bp
1026 O_BomoMSG10924_complete:A_BomoMSG_c22998_g1_i5
404bp
 hypothetical_protein_P355_2306_[Burkholderia_cenocepacia_KC-01]
1027 O_BomoMSG10925_complete:A_BomoMSG_c22998_g1_i5
390bp
 ATP-binding_cassette_sub-family_B_member_7,_mitochondrial_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006810 P transport
GO:0006879 P cellular iron ion homeostasis
GO:0008152 P metabolic process
GO:0015232 F heme transmembrane transporter activity
GO:0015886 P heme transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
1028 O_BomoMSG10926_complete:A_BomoMSG_c22998_g1_i5
254bp
1029 O_BomoMSG10927_5prime_partial:A_BomoMSG_c22998_g1_i5
166bp
 ATP-binding_cassette_sub-family_B_member_7,_mitochondrial_isoform_X1_[Bombyx_mori]
1030 O_BomoMSG10928_complete:A_BomoMSG_c22998_g1_i5
100bp
1031 O_BomoMSG10929_5prime_partial:A_BomoMSG_c22998_g1_i6
740bp
 ATP-binding_cassette_sub-family_B_member_7,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006810 P transport
GO:0006879 P cellular iron ion homeostasis
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
1032 O_BomoMSG1092_internal:A_BomoMSG_c5129_g1_i1
126bp
 PREDICTED:_uncharacterized_protein_LOC106134435_[Amyelois_transitella]
1033 O_BomoMSG10930_complete:A_BomoMSG_c22998_g1_i6
520bp
 hypothetical_protein_P355_2306_[Burkholderia_cenocepacia_KC-01]
1034 O_BomoMSG10931_complete:A_BomoMSG_c22998_g1_i6
248bp
1035 O_BomoMSG10932_complete:A_BomoMSG_c22998_g1_i6
209bp
1036 O_BomoMSG10933_5prime_partial:A_BomoMSG_c23000_g1_i1
147bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101742325_[Bombyx_mori]
1037 O_BomoMSG10934_3prime_partial:A_BomoMSG_c23001_g1_i1
323bp
 zinc-containing_alcohol_dehydrogenase_[Bombyx_mori]
GO:0005975 P carbohydrate metabolic process
GO:0008270 F zinc ion binding
GO:0009405 P obsolete pathogenesis
GO:0016491 F oxidoreductase activity
GO:0033709 F D-arabinitol dehydrogenase, D-ribulose forming (NADP+) activity
GO:0042995 C cell projection
GO:0046872 F metal ion binding
GO:0052677 F D-arabinitol dehydrogenase, D-xylulose forming (NADP+) activity
GO:0055114 P obsolete oxidation-reduction process
1038 O_BomoMSG10935_5prime_partial:A_BomoMSG_c23002_g1_i1
254bp
 DDB1-_and_CUL4-associated_factor_13_[Bombyx_mori]
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0016567 P protein ubiquitination
GO:0030529 C ribonucleoprotein complex
GO:0032040 C small-subunit processome
GO:0042254 P ribosome biogenesis
GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
1039 O_BomoMSG10936_complete:A_BomoMSG_c23002_g1_i2
448bp
 DDB1-_and_CUL4-associated_factor_13_[Bombyx_mori]
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0016567 P protein ubiquitination
GO:0030529 C ribonucleoprotein complex
GO:0032040 C small-subunit processome
GO:0042254 P ribosome biogenesis
GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
1040 O_BomoMSG10937_internal:A_BomoMSG_c23004_g1_i1
245bp
 PHD_finger_protein_14_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0008270 F zinc ion binding
GO:0008285 P negative regulation of cell population proliferation
GO:0046872 F metal ion binding
GO:0048286 P lung alveolus development
GO:0072201 P negative regulation of mesenchymal cell proliferation
GO:2000584 P negative regulation of platelet-derived growth factor receptor-alpha signaling pathway
GO:2000791 P negative regulation of mesenchymal cell proliferation involved in lung development
1041 O_BomoMSG10938_5prime_partial:A_BomoMSG_c23004_g1_i1
102bp
1042 O_BomoMSG10939_internal:A_BomoMSG_c23004_g1_i2
286bp
 PHD_finger_protein_14_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0008270 F zinc ion binding
GO:0008285 P negative regulation of cell population proliferation
GO:0046872 F metal ion binding
GO:0048286 P lung alveolus development
GO:0072201 P negative regulation of mesenchymal cell proliferation
GO:2000584 P negative regulation of platelet-derived growth factor receptor-alpha signaling pathway
GO:2000791 P negative regulation of mesenchymal cell proliferation involved in lung development
1043 O_BomoMSG1093_internal:A_BomoMSG_c5132_g1_i1
124bp
 uncharacterized_protein_LOC101736423_[Bombyx_mori]
1044 O_BomoMSG10940_5prime_partial:A_BomoMSG_c23004_g1_i2
118bp
1045 O_BomoMSG10941_internal:A_BomoMSG_c23004_g1_i3
220bp
 PHD_finger_protein_14_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0008270 F zinc ion binding
GO:0008285 P negative regulation of cell population proliferation
GO:0046872 F metal ion binding
GO:0048286 P lung alveolus development
GO:0072201 P negative regulation of mesenchymal cell proliferation
GO:2000584 P negative regulation of platelet-derived growth factor receptor-alpha signaling pathway
GO:2000791 P negative regulation of mesenchymal cell proliferation involved in lung development
1046 O_BomoMSG10942_5prime_partial:A_BomoMSG_c23004_g1_i3
102bp
1047 O_BomoMSG10943_3prime_partial:A_BomoMSG_c23009_g1_i1
219bp
 nipped-B-like_protein_A_[Bombyx_mori]
GO:0003146 P heart jogging
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0006412 P translation
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0007417 P central nervous system development
GO:0007507 P heart development
GO:0009303 P rRNA transcription
GO:0010468 P regulation of gene expression
GO:0035118 P embryonic pectoral fin morphogenesis
GO:0048565 P digestive tract development
GO:0048703 P embryonic viscerocranium morphogenesis
GO:0060828 P regulation of canonical Wnt signaling pathway
GO:0071733 P obsolete transcriptional activation by promoter-enhancer looping
1048 O_BomoMSG10944_complete:A_BomoMSG_c23009_g1_i1
140bp
1049 O_BomoMSG10945_3prime_partial:A_BomoMSG_c23009_g1_i2
219bp
 nipped-B-like_protein_A_[Bombyx_mori]
GO:0003146 P heart jogging
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0006412 P translation
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0007417 P central nervous system development
GO:0007507 P heart development
GO:0009303 P rRNA transcription
GO:0010468 P regulation of gene expression
GO:0035118 P embryonic pectoral fin morphogenesis
GO:0048565 P digestive tract development
GO:0048703 P embryonic viscerocranium morphogenesis
GO:0060828 P regulation of canonical Wnt signaling pathway
GO:0071733 P obsolete transcriptional activation by promoter-enhancer looping
1050 O_BomoMSG10946_complete:A_BomoMSG_c23009_g1_i2
140bp
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