Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
10291	O_BomoMSG19263_5prime_partial:A_BomoMSG_c26394_g1_i10 304bp	Bomo_Chr1	nuclear_hormone_receptor_FTZ-F1_isoform_X7_[Bombyx_mori]	GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0003707 F steroid hormone receptor activity GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0008270 F zinc ion binding GO:0043401 P steroid hormone mediated signaling pathway GO:0043565 F sequence-specific DNA binding GO:0046872 F metal ion binding
10292	O_BomoMSG19264_5prime_partial:A_BomoMSG_c26395_g1_i1 526bp	Bomo_Chr19	ran-binding_protein_9_isoform_X3_[Bombyx_mori]	GO:0005634 C nucleus GO:0005737 C cytoplasm
10293	O_BomoMSG19265_5prime_partial:A_BomoMSG_c26395_g1_i1 328bp	Bomo_Chr19
10294	O_BomoMSG19266_complete:A_BomoMSG_c26395_g1_i1 217bp	Bomo_Chr19
10295	O_BomoMSG19267_complete:A_BomoMSG_c26395_g1_i1 116bp	Bomo_Chr19
10296	O_BomoMSG19268_complete:A_BomoMSG_c26395_g1_i1 105bp	Bomo_Chr19
10297	O_BomoMSG19269_5prime_partial:A_BomoMSG_c26395_g1_i2 504bp	Bomo_Chr19	ran-binding_protein_9_isoform_X3_[Bombyx_mori]	GO:0005634 C nucleus GO:0005737 C cytoplasm
10298	O_BomoMSG1926_internal:A_BomoMSG_c9425_g1_i2 103bp	Bomo_Chr15	E3_ubiquitin-protein_ligase_HERC2-like,_partial_[Bombyx_mori]	GO:0004842 F ubiquitin-protein transferase activity GO:0005085 F guanyl-nucleotide exchange factor activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0005743 C mitochondrial inner membrane GO:0005814 C centriole GO:0005856 C cytoskeleton GO:0006281 P DNA repair GO:0006303 P double-strand break repair via nonhomologous end joining GO:0006886 P intracellular protein transport GO:0006974 P cellular response to DNA damage stimulus GO:0007283 P spermatogenesis GO:0008270 F zinc ion binding GO:0016020 C membrane GO:0016567 P protein ubiquitination GO:0016874 F ligase activity GO:0016925 P protein sumoylation GO:0031625 F ubiquitin protein ligase binding GO:0032183 F SUMO binding GO:0042787 P ubiquitin-dependent protein catabolic process GO:0043547 P positive regulation of GTPase activity GO:0046872 F metal ion binding
10299	O_BomoMSG19270_5prime_partial:A_BomoMSG_c26395_g1_i2 328bp	Bomo_Chr19
10300	O_BomoMSG19271_complete:A_BomoMSG_c26395_g1_i2 217bp	Bomo_Chr19
10301	O_BomoMSG19272_complete:A_BomoMSG_c26395_g1_i2 116bp	Bomo_Chr19
10302	O_BomoMSG19273_5prime_partial:A_BomoMSG_c26395_g1_i3 400bp	Bomo_Chr19	ran-binding_protein_9_isoform_X3_[Bombyx_mori]	GO:0005634 C nucleus GO:0005737 C cytoplasm
10303	O_BomoMSG19274_5prime_partial:A_BomoMSG_c26395_g1_i3 328bp	Bomo_Chr19
10304	O_BomoMSG19275_complete:A_BomoMSG_c26395_g1_i3 217bp	Bomo_Chr19
10305	O_BomoMSG19276_5prime_partial:A_BomoMSG_c26395_g1_i4 163bp	Bomo_Chr19
10306	O_BomoMSG19277_complete:A_BomoMSG_c26395_g1_i4 141bp	Bomo_Chr19	ran-binding_protein_9_isoform_X3_[Bombyx_mori]	GO:0005515 F protein binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0005875 C microtubule associated complex GO:0005886 C plasma membrane GO:0006461 P protein-containing complex assembly GO:0007020 P microtubule nucleation GO:0007411 P axon guidance GO:0008536 F small GTPase binding GO:0016020 C membrane GO:0019899 F enzyme binding GO:0070373 P negative regulation of ERK1 and ERK2 cascade
10307	O_BomoMSG19278_internal:A_BomoMSG_c26396_g1_i1 399bp	Bomo_Chr13	uncharacterized_protein_LOC101741349_isoform_X1_[Bombyx_mori]
10308	O_BomoMSG19279_internal:A_BomoMSG_c26396_g1_i2 443bp	Bomo_Chr13	uncharacterized_protein_LOC101741349_isoform_X2_[Bombyx_mori]
10309	O_BomoMSG1927_internal:A_BomoMSG_c9430_g1_i1 130bp	Bomo_Chr10	hemocytin_[Bombyx_mori]	GO:0007155 P cell adhesion GO:0030246 F carbohydrate binding
10310	O_BomoMSG19280_3prime_partial:A_BomoMSG_c26396_g1_i3 417bp	Bomo_Chr13	uncharacterized_protein_LOC101741349_isoform_X4_[Bombyx_mori]
10311	O_BomoMSG19281_complete:A_BomoMSG_c26398_g1_i1 291bp	Bomo_Chr21	G_patch_domain_and_KOW_motifs-containing_protein_isoform_X2_[Bombyx_mori]	GO:0003674 F molecular_function GO:0003676 F nucleic acid binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0008150 P biological_process
10312	O_BomoMSG19282_3prime_partial:A_BomoMSG_c26398_g1_i2 412bp	Bomo_Chr21	G_patch_domain_and_KOW_motifs-containing_protein_isoform_X1_[Bombyx_mori]	GO:0003674 F molecular_function GO:0003676 F nucleic acid binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0008150 P biological_process
10313	O_BomoMSG19283_5prime_partial:A_BomoMSG_c26399_g1_i1 240bp	Bomo_Chr23	PREDICTED:_uncharacterized_protein_LOC106715797_[Papilio_machaon]
10314	O_BomoMSG19284_5prime_partial:A_BomoMSG_c26400_g1_i1 1109bp	Bomo_Chr15	uncharacterized_protein_LOC105841250_isoform_X1_[Bombyx_mori]
10315	O_BomoMSG19285_complete:A_BomoMSG_c26400_g1_i1 108bp	Bomo_Chr15
10316	O_BomoMSG19286_complete:A_BomoMSG_c26400_g1_i1 101bp	Bomo_Chr15
10317	O_BomoMSG19287_5prime_partial:A_BomoMSG_c26400_g1_i2 1416bp	Bomo_Chr15	uncharacterized_protein_LOC105841250_isoform_X1_[Bombyx_mori]
10318	O_BomoMSG19288_complete:A_BomoMSG_c26400_g1_i2 108bp	Bomo_Chr15
10319	O_BomoMSG19289_complete:A_BomoMSG_c26400_g1_i2 101bp	Bomo_Chr15
10320	O_BomoMSG1928_internal:A_BomoMSG_c9430_g1_i1 130bp	Bomo_Chr10