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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10261 O_BomoMSG19236_complete:A_BomoMSG_c26389_g1_i5
123bp
10262 O_BomoMSG19237_complete:A_BomoMSG_c26389_g1_i7
654bp
 sec1_family_domain-containing_protein_2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006810 P transport
GO:0006904 P vesicle docking involved in exocytosis
GO:0008150 P biological_process
GO:0015031 P protein transport
GO:0016192 P vesicle-mediated transport
10263 O_BomoMSG19238_complete:A_BomoMSG_c26389_g1_i7
123bp
10264 O_BomoMSG19239_5prime_partial:A_BomoMSG_c26390_g1_i1
249bp
 heparin_sulfate_O-sulfotransferase_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0004394 F heparan sulfate 2-O-sulfotransferase activity
GO:0005794 C Golgi apparatus
GO:0007165 P signal transduction
GO:0007424 P open tracheal system development
GO:0008146 F sulfotransferase activity
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
10265 O_BomoMSG1923_5prime_partial:A_BomoMSG_c9415_g1_i1
108bp
10266 O_BomoMSG19240_complete:A_BomoMSG_c26390_g1_i2
340bp
 heparin_sulfate_O-sulfotransferase_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0004394 F heparan sulfate 2-O-sulfotransferase activity
GO:0005794 C Golgi apparatus
GO:0007165 P signal transduction
GO:0007424 P open tracheal system development
GO:0008146 F sulfotransferase activity
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
10267 O_BomoMSG19241_complete:A_BomoMSG_c26391_g1_i1
367bp
 metallophosphoesterase_1_isoform_X1_[Bombyx_mori]
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 C Golgi apparatus
GO:0005801 C cis-Golgi network
GO:0006506 P GPI anchor biosynthetic process
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0008081 F phosphoric diester hydrolase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0016787 F hydrolase activity
GO:0030145 F manganese ion binding
GO:0033116 C endoplasmic reticulum-Golgi intermediate compartment membrane
GO:0034235 F GPI anchor binding
GO:0046872 F metal ion binding
GO:0070971 C endoplasmic reticulum exit site
10268 O_BomoMSG19242_5prime_partial:A_BomoMSG_c26391_g1_i3
270bp
 metallophosphoesterase_1_homolog_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
10269 O_BomoMSG19243_3prime_partial:A_BomoMSG_c26392_g1_i1
564bp
 H(+)/Cl(-)_exchange_transporter_7_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005216 F ion channel activity
GO:0005247 F voltage-gated chloride channel activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006821 P chloride transport
GO:0009268 P response to pH
GO:0015297 F antiporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031410 C cytoplasmic vesicle
GO:0034220 P ion transmembrane transport
GO:0055085 P transmembrane transport
GO:1903959 P regulation of anion transmembrane transport
10270 O_BomoMSG19244_complete:A_BomoMSG_c26392_g1_i1
135bp
10271 O_BomoMSG19245_complete:A_BomoMSG_c26392_g1_i1
102bp
10272 O_BomoMSG19246_internal:A_BomoMSG_c26392_g1_i2
171bp
 H(+)/Cl(-)_exchange_transporter_7_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005216 F ion channel activity
GO:0005247 F voltage-gated chloride channel activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006821 P chloride transport
GO:0009268 P response to pH
GO:0015297 F antiporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031410 C cytoplasmic vesicle
GO:0034220 P ion transmembrane transport
GO:0055085 P transmembrane transport
GO:1903959 P regulation of anion transmembrane transport
10273 O_BomoMSG19247_5prime_partial:A_BomoMSG_c26392_g1_i2
131bp
10274 O_BomoMSG19248_internal:A_BomoMSG_c26392_g1_i3
354bp
 H(+)/Cl(-)_exchange_transporter_7_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005216 F ion channel activity
GO:0005247 F voltage-gated chloride channel activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006821 P chloride transport
GO:0009268 P response to pH
GO:0015297 F antiporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031410 C cytoplasmic vesicle
GO:0034220 P ion transmembrane transport
GO:0055085 P transmembrane transport
GO:1903959 P regulation of anion transmembrane transport
10275 O_BomoMSG19249_complete:A_BomoMSG_c26392_g1_i3
135bp
10276 O_BomoMSG1924_internal:A_BomoMSG_c9418_g1_i1
110bp
 Endoribonuclease_Dcr-1_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0003727 F single-stranded RNA binding
GO:0004386 F helicase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004525 F ribonuclease III activity
GO:0004530 F deoxyribonuclease I activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006309 P apoptotic DNA fragmentation
GO:0006396 P RNA processing
GO:0007279 P pole cell formation
GO:0007294 P germarium-derived oocyte fate determination
GO:0007367 P segment polarity determination
GO:0016246 P RNA interference
GO:0016442 C RISC complex
GO:0016443 F bidentate ribonuclease III activity
GO:0016787 F hydrolase activity
GO:0016891 F endoribonuclease activity, producing 5'-phosphomonoesters
GO:0030422 P production of siRNA involved in RNA interference
GO:0030727 P germarium-derived female germ-line cyst formation
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0033227 P dsRNA transport
GO:0035087 P siRNA loading onto RISC involved in RNA interference
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0042078 P germ-line stem cell division
GO:0042594 P response to starvation
GO:0045448 P mitotic cell cycle, embryonic
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
GO:0070883 F pre-miRNA binding
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
10277 O_BomoMSG19250_3prime_partial:A_BomoMSG_c26393_g1_i1
619bp
 conserved_oligomeric_Golgi_complex_subunit_7_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003674 F molecular_function
GO:0005730 C nucleolus
GO:0005794 C Golgi apparatus
GO:0006486 P protein glycosylation
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0007030 P Golgi organization
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017119 C Golgi transport complex
GO:0033365 P protein localization to organelle
GO:0034067 P protein localization to Golgi apparatus
GO:0043231 C intracellular membrane-bounded organelle
GO:0050821 P protein stabilization
10278 O_BomoMSG19251_complete:A_BomoMSG_c26393_g1_i1
223bp
10279 O_BomoMSG19252_5prime_partial:A_BomoMSG_c26393_g1_i1
120bp
10280 O_BomoMSG19253_3prime_partial:A_BomoMSG_c26393_g1_i2
561bp
 conserved_oligomeric_Golgi_complex_subunit_7_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003674 F molecular_function
GO:0005730 C nucleolus
GO:0005794 C Golgi apparatus
GO:0006486 P protein glycosylation
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0007030 P Golgi organization
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017119 C Golgi transport complex
GO:0033365 P protein localization to organelle
GO:0034067 P protein localization to Golgi apparatus
GO:0043231 C intracellular membrane-bounded organelle
GO:0050821 P protein stabilization
10281 O_BomoMSG19254_complete:A_BomoMSG_c26393_g1_i2
223bp
10282 O_BomoMSG19255_complete:A_BomoMSG_c26394_g1_i1
535bp
 nuclear_hormone_receptor_FTZ-F1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
10283 O_BomoMSG19256_5prime_partial:A_BomoMSG_c26394_g1_i3
241bp
 nuclear_hormone_receptor_FTZ-F1_isoform_X7_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
10284 O_BomoMSG19257_5prime_partial:A_BomoMSG_c26394_g1_i4
318bp
 nuclear_hormone_receptor_FTZ-F1_isoform_X7_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
10285 O_BomoMSG19258_complete:A_BomoMSG_c26394_g1_i4
116bp
10286 O_BomoMSG19259_5prime_partial:A_BomoMSG_c26394_g1_i5
284bp
 nuclear_hormone_receptor_FTZ-F1_isoform_X7_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
10287 O_BomoMSG1925_internal:A_BomoMSG_c9425_g1_i1
127bp
 E3_ubiquitin-protein_ligase_HERC2-like,_partial_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005743 C mitochondrial inner membrane
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007283 P spermatogenesis
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0032183 F SUMO binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
10288 O_BomoMSG19260_complete:A_BomoMSG_c26394_g1_i6
544bp
 nuclear_hormone_receptor_FTZ-F1_isoform_X6_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
10289 O_BomoMSG19261_complete:A_BomoMSG_c26394_g1_i7
535bp
 nuclear_hormone_receptor_FTZ-F1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
10290 O_BomoMSG19262_5prime_partial:A_BomoMSG_c26394_g1_i9
259bp
 nuclear_hormone_receptor_FTZ-F1_isoform_X7_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
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