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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10231 O_BomoMSG19209_5prime_partial:A_BomoMSG_c26381_g1_i2
544bp
 glycerol-3-phosphate_dehydrogenase_isoform_2_[Bombyx_mori]
GO:0004368 F glycerol-3-phosphate dehydrogenase (quinone) activity
GO:0005509 F calcium ion binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0006094 P gluconeogenesis
GO:0009331 C glycerol-3-phosphate dehydrogenase complex
GO:0016491 F oxidoreductase activity
GO:0019563 P glycerol catabolic process
GO:0035264 P multicellular organism growth
GO:0043010 P camera-type eye development
GO:0044255 P cellular lipid metabolic process
GO:0046872 F metal ion binding
GO:0052590 F sn-glycerol-3-phosphate:ubiquinone oxidoreductase activity
GO:0052591 F sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
10232 O_BomoMSG1920_internal:A_BomoMSG_c9399_g1_i1
138bp
 ubiquitin-protein_ligase_E3B_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
10233 O_BomoMSG19210_5prime_partial:A_BomoMSG_c26381_g1_i3
466bp
 glycerol-3-phosphate_dehydrogenase_isoform_2_[Bombyx_mori]
GO:0004368 F glycerol-3-phosphate dehydrogenase (quinone) activity
GO:0005509 F calcium ion binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0006094 P gluconeogenesis
GO:0009331 C glycerol-3-phosphate dehydrogenase complex
GO:0016491 F oxidoreductase activity
GO:0019563 P glycerol catabolic process
GO:0035264 P multicellular organism growth
GO:0043010 P camera-type eye development
GO:0044255 P cellular lipid metabolic process
GO:0046872 F metal ion binding
GO:0052590 F sn-glycerol-3-phosphate:ubiquinone oxidoreductase activity
GO:0052591 F sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
10234 O_BomoMSG19211_3prime_partial:A_BomoMSG_c26381_g1_i5
709bp
 glycerol-3-phosphate_dehydrogenase_isoform_1_[Bombyx_mori]
GO:0004368 F glycerol-3-phosphate dehydrogenase (quinone) activity
GO:0005509 F calcium ion binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0006094 P gluconeogenesis
GO:0009331 C glycerol-3-phosphate dehydrogenase complex
GO:0016491 F oxidoreductase activity
GO:0019563 P glycerol catabolic process
GO:0035264 P multicellular organism growth
GO:0043010 P camera-type eye development
GO:0044255 P cellular lipid metabolic process
GO:0046872 F metal ion binding
GO:0052590 F sn-glycerol-3-phosphate:ubiquinone oxidoreductase activity
GO:0052591 F sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
10235 O_BomoMSG19212_complete:A_BomoMSG_c26381_g1_i5
136bp
10236 O_BomoMSG19213_3prime_partial:A_BomoMSG_c26382_g1_i1
241bp
 putative_tyrosine-protein_kinase_Wsck_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
10237 O_BomoMSG19214_3prime_partial:A_BomoMSG_c26382_g1_i2
734bp
 putative_tyrosine-protein_kinase_Wsck_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016477 P cell migration
GO:0016740 F transferase activity
GO:0030154 P cell differentiation
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042127 P regulation of cell population proliferation
GO:0045087 P innate immune response
10238 O_BomoMSG19215_internal:A_BomoMSG_c26383_g1_i1
591bp
 microtubule-actin_cross-linking_factor_1,_isoforms_1/2/3/5_[Bombyx_mori]
GO:0001725 C stress fiber
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005882 C intermediate filament
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0005938 C cell cortex
GO:0007010 P cytoskeleton organization
GO:0007050 P regulation of cell cycle
GO:0007155 P cell adhesion
GO:0007409 P axonogenesis
GO:0008090 P retrograde axonal transport
GO:0008092 F cytoskeletal protein binding
GO:0009898 C cytoplasmic side of plasma membrane
GO:0014704 C intercalated disc
GO:0015629 C actin cytoskeleton
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0030018 C Z disc
GO:0030054 C cell junction
GO:0030056 C hemidesmosome
GO:0030424 C axon
GO:0031673 C H zone
GO:0035371 C microtubule plus-end
GO:0042383 C sarcolemma
GO:0042803 F protein homodimerization activity
GO:0042995 C cell projection
GO:0045104 P intermediate filament cytoskeleton organization
GO:0046872 F metal ion binding
GO:0046907 P intracellular transport
GO:0048471 C perinuclear region of cytoplasm
GO:0051010 F microtubule plus-end binding
GO:0097038 C perinuclear endoplasmic reticulum
GO:0097481 C postsynaptic density
GO:1904115 C axon cytoplasm
10239 O_BomoMSG19216_complete:A_BomoMSG_c26383_g1_i1
242bp
10240 O_BomoMSG19217_complete:A_BomoMSG_c26383_g1_i1
139bp
10241 O_BomoMSG19218_complete:A_BomoMSG_c26384_g1_i1
368bp
 hypothetical_protein_RR46_00529_[Papilio_xuthus]
GO:0046872 F metal ion binding
10242 O_BomoMSG19219_complete:A_BomoMSG_c26384_g3_i1
201bp
 NAD(P)H-hydrate_epimerase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016853 F isomerase activity
GO:0046872 F metal ion binding
10243 O_BomoMSG1921_internal:A_BomoMSG_c9400_g1_i1
190bp
 protein_crumbs_[Bombyx_mori]
GO:0001738 P morphogenesis of a polarized epithelium
GO:0001745 P compound eye morphogenesis
GO:0002009 P morphogenesis of an epithelium
GO:0005080 F protein kinase C binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005913 C adherens junction
GO:0005918 C septate junction
GO:0007043 P cell-cell junction assembly
GO:0007163 P establishment or maintenance of cell polarity
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007424 P open tracheal system development
GO:0007431 P salivary gland development
GO:0007435 P salivary gland morphogenesis
GO:0007443 P Malpighian tubule morphogenesis
GO:0008104 P protein localization
GO:0008284 P positive regulation of cell population proliferation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016028 C rhabdomere
GO:0016324 C apical plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0016332 P establishment or maintenance of polarity of embryonic epithelium
GO:0016334 P establishment or maintenance of polarity of follicular epithelium
GO:0030154 P cell differentiation
GO:0030507 F spectrin binding
GO:0032435 P negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0032880 P regulation of protein localization
GO:0033157 P regulation of intracellular protein transport
GO:0034332 P adherens junction organization
GO:0035002 P liquid clearance, open tracheal system
GO:0035003 C subapical complex
GO:0035088 P establishment or maintenance of apical/basal cell polarity
GO:0035090 P maintenance of apical/basal cell polarity
GO:0035239 P tube morphogenesis
GO:0035330 P regulation of hippo signaling
GO:0042051 P compound eye photoreceptor development
GO:0042052 P rhabdomere development
GO:0042327 P positive regulation of phosphorylation
GO:0045186 P zonula adherens assembly
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045218 P zonula adherens maintenance
GO:0045494 P photoreceptor cell maintenance
GO:0045570 P regulation of imaginal disc growth
GO:0045746 P negative regulation of Notch signaling pathway
GO:0046621 P negative regulation of organ growth
GO:0046664 P dorsal closure, amnioserosa morphology change
GO:0048477 P oogenesis
GO:0050821 P protein stabilization
GO:0051642 P centrosome localization
GO:0061024 P membrane organization
GO:0061336 P cell morphogenesis involved in Malpighian tubule morphogenesis
GO:0061541 P rhabdomere morphogenesis
GO:0098813 P nuclear chromosome segregation
10244 O_BomoMSG19220_complete:A_BomoMSG_c26384_g3_i3
224bp
 NAD(P)H-hydrate_epimerase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016853 F isomerase activity
GO:0046872 F metal ion binding
10245 O_BomoMSG19221_3prime_partial:A_BomoMSG_c26384_g1_i2
212bp
 hypothetical_protein_KGM_203558_[Danaus_plexippus_plexippus]
10246 O_BomoMSG19222_complete:A_BomoMSG_c26385_g1_i2
376bp
 protein_TSSC1_[Bombyx_mori]
10247 O_BomoMSG19223_complete:A_BomoMSG_c26385_g1_i2
100bp
10248 O_BomoMSG19224_3prime_partial:A_BomoMSG_c26386_g1_i1
433bp
 activating_signal_cointegrator_1_complex_subunit_2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
10249 O_BomoMSG19225_3prime_partial:A_BomoMSG_c26387_g2_i1
121bp
 carbonyl_reductase_[NADPH]_1_[Bombyx_mori]
GO:0004090 F carbonyl reductase (NADPH) activity
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0017144 P xenobiotic metabolic process
GO:0042373 P vitamin K metabolic process
GO:0047021 F 15-hydroxyprostaglandin dehydrogenase (NADP+) activity
GO:0050221 F prostaglandin-E2 9-reductase activity
GO:0055114 P obsolete oxidation-reduction process
10250 O_BomoMSG19226_internal:A_BomoMSG_c26387_g1_i2
151bp
 carbonyl_reductase_[NADPH]_1_[Bombyx_mori]
GO:0004090 F carbonyl reductase (NADPH) activity
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016655 F oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
GO:0017144 P xenobiotic metabolic process
GO:0042373 P vitamin K metabolic process
GO:0047021 F 15-hydroxyprostaglandin dehydrogenase (NADP+) activity
GO:0050221 F prostaglandin-E2 9-reductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
GO:1903561 C extracellular vesicle
10251 O_BomoMSG19227_5prime_partial:A_BomoMSG_c26389_g1_i1
404bp
 sec1_family_domain-containing_protein_2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006810 P transport
GO:0006904 P vesicle docking involved in exocytosis
GO:0008150 P biological_process
GO:0015031 P protein transport
GO:0016192 P vesicle-mediated transport
10252 O_BomoMSG19228_complete:A_BomoMSG_c26389_g1_i1
123bp
10253 O_BomoMSG19229_5prime_partial:A_BomoMSG_c26389_g1_i2
562bp
 sec1_family_domain-containing_protein_2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006810 P transport
GO:0006904 P vesicle docking involved in exocytosis
GO:0008150 P biological_process
GO:0015031 P protein transport
GO:0016192 P vesicle-mediated transport
10254 O_BomoMSG1922_5prime_partial:A_BomoMSG_c9400_g1_i1
153bp
10255 O_BomoMSG19230_complete:A_BomoMSG_c26389_g1_i2
123bp
10256 O_BomoMSG19231_5prime_partial:A_BomoMSG_c26389_g1_i3
305bp
 sec1_family_domain-containing_protein_2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006810 P transport
GO:0006904 P vesicle docking involved in exocytosis
GO:0008150 P biological_process
GO:0015031 P protein transport
GO:0016192 P vesicle-mediated transport
10257 O_BomoMSG19232_complete:A_BomoMSG_c26389_g1_i3
123bp
10258 O_BomoMSG19233_5prime_partial:A_BomoMSG_c26389_g1_i4
536bp
 sec1_family_domain-containing_protein_2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006810 P transport
GO:0006904 P vesicle docking involved in exocytosis
GO:0008150 P biological_process
GO:0015031 P protein transport
GO:0016192 P vesicle-mediated transport
10259 O_BomoMSG19234_complete:A_BomoMSG_c26389_g1_i4
123bp
10260 O_BomoMSG19235_5prime_partial:A_BomoMSG_c26389_g1_i5
427bp
 sec1_family_domain-containing_protein_2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006810 P transport
GO:0006904 P vesicle docking involved in exocytosis
GO:0008150 P biological_process
GO:0015031 P protein transport
GO:0016192 P vesicle-mediated transport
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