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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10171 O_BomoMSG19155_complete:A_BomoMSG_c26363_g1_i2
139bp
 hypothetical_protein_ALC56_12040_[Trachymyrmex_septentrionalis]
10172 O_BomoMSG19156_5prime_partial:A_BomoMSG_c26364_g3_i1
392bp
 trafficking_protein_particle_complex_subunit_8_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0005515 F protein binding
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0016192 P vesicle-mediated transport
GO:0030242 P autophagy of peroxisome
GO:0031410 C cytoplasmic vesicle
GO:0032258 P cytoplasm to vacuole transport by the Cvt pathway
GO:0034497 P protein localization to phagophore assembly site
GO:0044804 P autophagy of nucleus
GO:1990072 C TRAPPIII protein complex
10173 O_BomoMSG19157_complete:A_BomoMSG_c26364_g3_i1
102bp
10174 O_BomoMSG19158_internal:A_BomoMSG_c26364_g4_i2
230bp
 ATP_synthase_subunit_s,_mitochondrial_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006754 P ATP biosynthetic process
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0045263 C proton-transporting ATP synthase complex, coupling factor F(o)
GO:0046872 F metal ion binding
10175 O_BomoMSG19159_internal:A_BomoMSG_c26364_g4_i3
119bp
 ATP_synthase_subunit_s,_mitochondrial_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006754 P ATP biosynthetic process
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0045263 C proton-transporting ATP synthase complex, coupling factor F(o)
GO:0046872 F metal ion binding
10176 O_BomoMSG1915_3prime_partial:A_BomoMSG_c9394_g1_i1
108bp
10177 O_BomoMSG19160_5prime_partial:A_BomoMSG_c26366_g1_i1
436bp
 mitochondrial_import_inner_membrane_translocase_subunit_TIM44_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0006626 P protein targeting to mitochondrion
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030150 P protein import into mitochondrial matrix
GO:0051087 F chaperone binding
10178 O_BomoMSG19161_complete:A_BomoMSG_c26366_g1_i2
437bp
 mitochondrial_import_inner_membrane_translocase_subunit_TIM44_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0006626 P protein targeting to mitochondrion
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030150 P protein import into mitochondrial matrix
GO:0051087 F chaperone binding
10179 O_BomoMSG19162_5prime_partial:A_BomoMSG_c26367_g1_i1
209bp
 enhancer_of_mRNA-decapping_protein_4-like_[Bombyx_mori]
GO:0000932 C P-body
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0043928 P exonucleolytic catabolism of deadenylated mRNA
10180 O_BomoMSG19163_5prime_partial:A_BomoMSG_c26368_g1_i2
125bp
 protein_OPI10_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
10181 O_BomoMSG19164_complete:A_BomoMSG_c26368_g1_i3
202bp
 protein_OPI10_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
10182 O_BomoMSG19165_complete:A_BomoMSG_c26368_g1_i4
202bp
 protein_OPI10_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
10183 O_BomoMSG19166_complete:A_BomoMSG_c26369_g1_i1
546bp
 uncharacterized_protein_LOC101746363_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0005057 F obsolete signal transducer activity, downstream of receptor
GO:0005068 F transmembrane receptor protein tyrosine kinase adaptor activity
GO:0005158 F insulin receptor binding
GO:0005622 C intracellular anatomical structure
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007265 P Ras protein signal transduction
10184 O_BomoMSG19167_complete:A_BomoMSG_c26370_g1_i2
404bp
 popeye_domain-containing_protein_3-like_[Helicoverpa_armigera]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042391 P regulation of membrane potential
10185 O_BomoMSG19168_5prime_partial:A_BomoMSG_c26371_g1_i1
664bp
 vacuolar_protein_sorting-associated_protein_51_homolog_[Bombyx_mori]
GO:0000938 C GARP complex
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0032456 P endocytic recycling
10186 O_BomoMSG19169_5prime_partial:A_BomoMSG_c26371_g1_i2
368bp
 vacuolar_protein_sorting-associated_protein_51_homolog_[Bombyx_mori]
GO:0000938 C GARP complex
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0032456 P endocytic recycling
10187 O_BomoMSG1916_internal:A_BomoMSG_c9395_g1_i1
276bp
 uncharacterized_protein_LOC101744711_isoform_X2_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0008022 F protein C-terminus binding
GO:0008283 P cell population proliferation
GO:0021987 P cerebral cortex development
GO:0022008 P neurogenesis
GO:0022027 P interkinetic nuclear migration
GO:0030953 P astral microtubule organization
GO:0032880 P regulation of protein localization
GO:0032886 P regulation of microtubule-based process
10188 O_BomoMSG19170_complete:A_BomoMSG_c26372_g1_i1
652bp
 YTH_domain-containing_family_protein_3_isoform_X2_[Bombyx_mori]
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006959 P humoral immune response
GO:0043488 P regulation of mRNA stability
GO:0044822 F RNA binding
GO:1903679 P positive regulation of cap-independent translational initiation
GO:1990247 F N6-methyladenosine-containing RNA binding
10189 O_BomoMSG19171_complete:A_BomoMSG_c26372_g1_i1
154bp
10190 O_BomoMSG19172_complete:A_BomoMSG_c26372_g1_i1
113bp
10191 O_BomoMSG19173_complete:A_BomoMSG_c26372_g1_i1
110bp
10192 O_BomoMSG19174_5prime_partial:A_BomoMSG_c26372_g1_i2
535bp
 YTH_domain-containing_family_protein_3_isoform_X1_[Bombyx_mori]
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006959 P humoral immune response
GO:0043488 P regulation of mRNA stability
GO:0044822 F RNA binding
GO:1903679 P positive regulation of cap-independent translational initiation
GO:1990247 F N6-methyladenosine-containing RNA binding
10193 O_BomoMSG19175_complete:A_BomoMSG_c26372_g1_i2
154bp
10194 O_BomoMSG19176_complete:A_BomoMSG_c26372_g1_i2
113bp
10195 O_BomoMSG19177_complete:A_BomoMSG_c26372_g1_i2
110bp
10196 O_BomoMSG19178_complete:A_BomoMSG_c26372_g1_i3
609bp
 YTH_domain-containing_family_protein_3_isoform_X4_[Bombyx_mori]
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006959 P humoral immune response
GO:0043488 P regulation of mRNA stability
GO:0044822 F RNA binding
GO:1903679 P positive regulation of cap-independent translational initiation
GO:1990247 F N6-methyladenosine-containing RNA binding
10197 O_BomoMSG19179_complete:A_BomoMSG_c26372_g1_i3
154bp
10198 O_BomoMSG1917_internal:A_BomoMSG_c9397_g1_i1
136bp
10199 O_BomoMSG19180_complete:A_BomoMSG_c26372_g1_i3
113bp
10200 O_BomoMSG19181_complete:A_BomoMSG_c26372_g1_i3
110bp
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