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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10141 O_BomoMSG19128_5prime_partial:A_BomoMSG_c26349_g1_i6
101bp
10142 O_BomoMSG19129_5prime_partial:A_BomoMSG_c26350_g1_i1
361bp
 uncharacterized_protein_LOC110379660_[Helicoverpa_armigera]
10143 O_BomoMSG1912_internal:A_BomoMSG_c9384_g1_i1
129bp
 dorsal-ventral_patterning_protein_Sog_isoform_X1_[Bombyx_mori]
GO:0005518 F collagen binding
GO:0005886 C plasma membrane
GO:0007275 P multicellular organism development
GO:0007313 P maternal specification of dorsal/ventral axis, oocyte, soma encoded
GO:0007354 P zygotic determination of anterior/posterior axis, embryo
GO:0007362 P terminal region determination
GO:0007378 P amnioserosa formation
GO:0007398 P ectoderm development
GO:0008083 F growth factor activity
GO:0008293 P torso signaling pathway
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030509 P BMP signaling pathway
GO:0030510 P regulation of BMP signaling pathway
GO:0030511 P positive regulation of transforming growth factor beta receptor signaling pathway
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0035271 P ring gland development
GO:0040008 P regulation of growth
GO:0061328 P posterior Malpighian tubule development
10144 O_BomoMSG19130_complete:A_BomoMSG_c26350_g1_i1
155bp
10145 O_BomoMSG19131_5prime_partial:A_BomoMSG_c26350_g1_i2
339bp
 uncharacterized_protein_LOC110379660_[Helicoverpa_armigera]
10146 O_BomoMSG19132_complete:A_BomoMSG_c26350_g1_i2
155bp
10147 O_BomoMSG19133_complete:A_BomoMSG_c26351_g1_i2
669bp
 ADP-ribosylation_factor-binding_protein_GGA1_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005654 C nucleoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030131 C clathrin adaptor complex
GO:0043231 C intracellular membrane-bounded organelle
GO:0045732 P positive regulation of protein catabolic process
GO:1901998 P toxin transport
10148 O_BomoMSG19134_complete:A_BomoMSG_c26352_g1_i1
149bp
 mediator_of_RNA_polymerase_II_transcription_subunit_21_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
10149 O_BomoMSG19135_5prime_partial:A_BomoMSG_c26354_g1_i1
150bp
 facilitated_trehalose_transporter_Tret1-like_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005351 F carbohydrate:proton symporter activity
GO:0005355 F glucose transmembrane transporter activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015767 P lactose transport
GO:0015768 P maltose transport
GO:0015770 P sucrose transport
GO:0015771 P trehalose transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0035428 P hexose transmembrane transport
GO:0046323 P glucose import
GO:0055085 P transmembrane transport
GO:1904659 P glucose transmembrane transport
10150 O_BomoMSG19136_complete:A_BomoMSG_c26354_g1_i1
109bp
10151 O_BomoMSG19137_5prime_partial:A_BomoMSG_c26354_g1_i2
470bp
 facilitated_trehalose_transporter_Tret1-like_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015767 P lactose transport
GO:0015768 P maltose transport
GO:0015770 P sucrose transport
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
10152 O_BomoMSG19138_complete:A_BomoMSG_c26354_g1_i2
165bp
10153 O_BomoMSG19139_complete:A_BomoMSG_c26354_g1_i2
134bp
10154 O_BomoMSG1913_complete:A_BomoMSG_c9388_g1_i1
349bp
 glyoxylate_reductase/hydroxypyruvate_reductase_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005782 C peroxisomal matrix
GO:0005829 C cytosol
GO:0007588 P excretion
GO:0008152 P metabolic process
GO:0008465 F glycerate dehydrogenase activity
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0016618 F hydroxypyruvate reductase activity
GO:0030267 F glyoxylate reductase (NADP+) activity
GO:0031406 F carboxylic acid binding
GO:0042803 F protein homodimerization activity
GO:0043648 P dicarboxylic acid metabolic process
GO:0046487 P glyoxylate metabolic process
GO:0050661 F NADP binding
GO:0051259 P protein complex oligomerization
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
GO:0070402 F NADPH binding
10155 O_BomoMSG19140_internal:A_BomoMSG_c26355_g1_i1
241bp
 PREDICTED:_uncharacterized_protein_LOC105564750,_partial_[Vollenhovia_emeryi]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
10156 O_BomoMSG19141_3prime_partial:A_BomoMSG_c26355_g5_i1
457bp
 Uncharacterized_protein_OBRU01_09374_[Operophtera_brumata]
10157 O_BomoMSG19142_complete:A_BomoMSG_c26355_g4_i3
625bp
 retroelement_polyprotein_[Danaus_plexippus_plexippus]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
10158 O_BomoMSG19143_complete:A_BomoMSG_c26355_g4_i3
103bp
10159 O_BomoMSG19144_5prime_partial:A_BomoMSG_c26355_g4_i4
313bp
 retroelement_polyprotein_[Danaus_plexippus_plexippus]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
10160 O_BomoMSG19145_complete:A_BomoMSG_c26357_g1_i1
285bp
 39S_ribosomal_protein_L4,_mitochondrial_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005840 C ribosome
GO:0006412 P translation
GO:0022626 C cytosolic ribosome
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
10161 O_BomoMSG19146_3prime_partial:A_BomoMSG_c26359_g1_i1
424bp
 protoporphyrinogen_oxidase_[Bombyx_mori]
GO:0004729 F oxygen-dependent protoporphyrinogen oxidase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006779 P porphyrin-containing compound biosynthetic process
GO:0006782 P protoporphyrinogen IX biosynthetic process
GO:0006783 P heme biosynthetic process
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0031304 C intrinsic component of mitochondrial inner membrane
GO:0031966 C mitochondrial membrane
GO:0055114 P obsolete oxidation-reduction process
10162 O_BomoMSG19147_complete:A_BomoMSG_c26360_g1_i3
191bp
 inosine_triphosphatase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005737 C cytoplasm
GO:0009117 P nucleotide metabolic process
GO:0009143 P nucleoside triphosphate catabolic process
GO:0009204 P deoxyribonucleoside triphosphate catabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0047429 F nucleoside-triphosphate diphosphatase activity
10163 O_BomoMSG19148_5prime_partial:A_BomoMSG_c26361_g1_i1
101bp
10164 O_BomoMSG19149_3prime_partial:A_BomoMSG_c26361_g2_i1
108bp
 DNA_repair_protein_XRCC1_isoform_X3_[Bombyx_mori]
GO:0000012 P single strand break repair
GO:0000724 P double-strand break repair via homologous recombination
GO:0001666 P response to hypoxia
GO:0003684 F damaged DNA binding
GO:0003909 F DNA ligase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006281 P DNA repair
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006284 P base-excision repair
GO:0006288 P base-excision repair, DNA ligation
GO:0006297 P nucleotide-excision repair, DNA gap filling
GO:0006974 P cellular response to DNA damage stimulus
GO:0010033 P response to organic substance
GO:0019899 F enzyme binding
GO:0042493 P response to xenobiotic stimulus
10165 O_BomoMSG1914_internal:A_BomoMSG_c9394_g1_i1
306bp
 glypican-4_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005796 C Golgi lumen
GO:0005886 C plasma membrane
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0009897 C external side of plasma membrane
GO:0016020 C membrane
GO:0031225 C anchored component of membrane
GO:0043395 F heparan sulfate proteoglycan binding
GO:0070062 C extracellular exosome
10166 O_BomoMSG19150_5prime_partial:A_BomoMSG_c26361_g1_i2
101bp
10167 O_BomoMSG19151_complete:A_BomoMSG_c26362_g1_i1
209bp
 uncharacterized_protein_LOC101746869_[Bombyx_mori]
GO:0005515 F protein binding
10168 O_BomoMSG19152_complete:A_BomoMSG_c26363_g1_i1
334bp
 LIM_and_senescent_cell_antigen-like-containing_domain_protein_1_isoform_X1_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016337 P cell-cell adhesion
GO:0030054 C cell junction
GO:0043066 P negative regulation of apoptotic process
GO:0045216 P cell-cell junction organization
GO:0046872 F metal ion binding
GO:0050680 P negative regulation of epithelial cell proliferation
GO:2000178 P negative regulation of neural precursor cell proliferation
GO:2000346 P negative regulation of hepatocyte proliferation
GO:2001046 P positive regulation of integrin-mediated signaling pathway
10169 O_BomoMSG19153_complete:A_BomoMSG_c26363_g1_i1
139bp
 hypothetical_protein_ALC56_12040_[Trachymyrmex_septentrionalis]
10170 O_BomoMSG19154_complete:A_BomoMSG_c26363_g1_i2
340bp
 LIM_and_senescent_cell_antigen-like-containing_domain_protein_1_isoform_X1_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016337 P cell-cell adhesion
GO:0030054 C cell junction
GO:0043066 P negative regulation of apoptotic process
GO:0045216 P cell-cell junction organization
GO:0046872 F metal ion binding
GO:0050680 P negative regulation of epithelial cell proliferation
GO:2000178 P negative regulation of neural precursor cell proliferation
GO:2000346 P negative regulation of hepatocyte proliferation
GO:2001046 P positive regulation of integrin-mediated signaling pathway
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