Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
991	O_BomoASG10893_internal:A_BomoASG_c26650_g1_i2 125bp	Bomo_Chr16
992	O_BomoASG10894_3prime_partial:A_BomoASG_c26653_g1_i1 220bp	Bomo_Chr11	YTH_domain-containing_protein_1_[Bombyx_mori]	GO:0000398 P mRNA splicing, via spliceosome GO:0003723 F RNA binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0006376 P mRNA splice site selection GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0016604 C nuclear body GO:0016607 C nuclear speck GO:0044822 F RNA binding GO:0048024 P regulation of mRNA splicing, via spliceosome GO:1990247 F N6-methyladenosine-containing RNA binding
993	O_BomoASG10895_complete:A_BomoASG_c26654_g1_i1 151bp	Bomo_Chr17	PREDICTED:_uncharacterized_protein_LOC105380399_[Plutella_xylostella]
994	O_BomoASG10896_complete:A_BomoASG_c26655_g1_i1 599bp	Bomo_Chr20	phosphatidylinositide_phosphatase_SAC1_[Bombyx_mori]	GO:0005783 C endoplasmic reticulum GO:0005789 C endoplasmic reticulum membrane GO:0008088 P axo-dendritic transport GO:0012505 C endomembrane system GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016199 P axon midline choice point recognition GO:0016311 P dephosphorylation GO:0016787 F hydrolase activity GO:0016791 F phosphatase activity GO:0030424 C axon GO:0031122 P cytoplasmic microtubule organization GO:0042578 F phosphoric ester hydrolase activity GO:0043025 C neuronal cell body GO:0046329 P negative regulation of JNK cascade GO:0046488 P phosphatidylinositol metabolic process GO:0046664 P dorsal closure, amnioserosa morphology change GO:0052866 F phosphatidylinositol phosphate phosphatase activity GO:0060074 P synapse maturation GO:0060439 P trachea morphogenesis GO:0071683 C sensory dendrite
995	O_BomoASG10897_complete:A_BomoASG_c26655_g1_i1 218bp	Bomo_Chr20
996	O_BomoASG10898_complete:A_BomoASG_c26656_g1_i1 473bp	Bomo_Chr8	uncharacterized_protein_LOC101735459_[Bombyx_mori]	GO:0000014 F single-stranded DNA endodeoxyribonuclease activity GO:0000077 P DNA damage checkpoint signaling GO:0000724 P double-strand break repair via homologous recombination GO:0003677 F DNA binding GO:0004518 F nuclease activity GO:0004519 F endonuclease activity GO:0005634 C nucleus GO:0006281 P DNA repair GO:0006974 P cellular response to DNA damage stimulus GO:0007049 P cell cycle GO:0007067 P mitotic cell cycle GO:0016787 F hydrolase activity GO:0051301 P cell division GO:0051321 P meiotic cell cycle GO:0090305 P nucleic acid phosphodiester bond hydrolysis
997	O_BomoASG10899_complete:A_BomoASG_c26656_g1_i1 160bp	Bomo_Chr8
998	O_BomoASG1089_complete:A_BomoASG_c6538_g1_i1 530bp	Bomo_Chr3	fatty-acid_amide_hydrolase_2-B_[Bombyx_mori]	GO:0005811 C lipid droplet GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016787 F hydrolase activity GO:0016884 F carbon-nitrogen ligase activity, with glutamine as amido-N-donor GO:0017064 F fatty acid amide hydrolase activity GO:0019369 P arachidonic acid metabolic process
999	O_BomoASG108_internal:A_BomoASG_c633_g1_i1 106bp	Bomo_Chr20	protein_5NUC_isoform_X4_[Bombyx_mori]	GO:0009166 P nucleotide catabolic process GO:0016787 F hydrolase activity
1000	O_BomoASG10900_3prime_partial:A_BomoASG_c26657_g1_i1 102bp	Bomo_Chr22
1001	O_BomoASG10901_internal:A_BomoASG_c26658_g1_i1 275bp	Bomo_Chr23	toll-like_receptor_6_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005576 C extracellular region GO:0008150 P biological_process GO:0070062 C extracellular exosome GO:0072562 C blood microparticle
1002	O_BomoASG10902_5prime_partial:A_BomoASG_c26658_g1_i1 129bp	Bomo_Chr23
1003	O_BomoASG10903_3prime_partial:A_BomoASG_c26658_g1_i2 373bp	Bomo_Chr23	toll-like_receptor_6_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005576 C extracellular region GO:0008150 P biological_process GO:0070062 C extracellular exosome GO:0072562 C blood microparticle
1004	O_BomoASG10904_5prime_partial:A_BomoASG_c26658_g1_i2 129bp	Bomo_Chr23
1005	O_BomoASG10905_complete:A_BomoASG_c26658_g1_i2 121bp	Bomo_Chr23
1006	O_BomoASG10906_internal:A_BomoASG_c26658_g2_i1 353bp	Bomo_Chr23	toll-like_receptor_6_[Bombyx_mori]	GO:0005520 F insulin-like growth factor binding GO:0005576 C extracellular region GO:0005615 C extracellular space GO:0005654 C nucleoplasm GO:0007155 P cell adhesion GO:0042567 C insulin-like growth factor ternary complex GO:0070062 C extracellular exosome
1007	O_BomoASG10907_internal:A_BomoASG_c26658_g2_i2 195bp	Bomo_Chr23	toll-like_receptor_6_[Bombyx_mori]	GO:0005886 C plasma membrane GO:0007268 P chemical synaptic transmission GO:0007409 P axonogenesis GO:0009986 C cell surface GO:0014069 C postsynaptic density GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0030054 C cell junction GO:0045202 C synapse GO:0045211 C postsynaptic membrane
1008	O_BomoASG10908_internal:A_BomoASG_c26658_g2_i3 170bp	Bomo_Chr23	toll-like_receptor_6_[Bombyx_mori]	GO:0005886 C plasma membrane GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0030054 C cell junction GO:0045202 C synapse GO:0045211 C postsynaptic membrane
1009	O_BomoASG10909_5prime_partial:A_BomoASG_c26659_g1_i1 120bp	Bomo_Chr6
1010	O_BomoASG1090_complete:A_BomoASG_c6541_g1_i1 222bp	Bomo_Chr26	uncharacterized_protein_LOC101740081_[Bombyx_mori]
1011	O_BomoASG10910_5prime_partial:A_BomoASG_c26660_g1_i1 107bp	Bomo_Chr12
1012	O_BomoASG10911_complete:A_BomoASG_c26660_g1_i2 267bp	Bomo_Chr12	TATA-box-binding_protein_isoform_X1_[Bombyx_mori]	GO:0003677 F DNA binding GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006352 P DNA-templated transcription, initiation GO:0006355 P regulation of transcription, DNA-templated GO:0006366 P transcription by RNA polymerase II GO:0006402 P mRNA catabolic process GO:0007275 P multicellular organism development GO:0007369 P gastrulation
1013	O_BomoASG10912_5prime_partial:A_BomoASG_c26660_g1_i2 107bp	Bomo_Chr12
1014	O_BomoASG10913_3prime_partial:A_BomoASG_c26662_g1_i1 398bp	Bomo_Chr21	chondroitin_sulfate_synthase_1_[Bombyx_mori]	GO:0002063 P chondrocyte development GO:0005576 C extracellular region GO:0005794 C Golgi apparatus GO:0008376 F acetylgalactosaminyltransferase activity GO:0009954 P proximal/distal pattern formation GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016740 F transferase activity GO:0016757 F glycosyltransferase activity GO:0030206 P chondroitin sulfate biosynthetic process GO:0030279 P negative regulation of ossification GO:0031667 P response to nutrient levels GO:0032580 C Golgi cisterna membrane GO:0045880 P positive regulation of smoothened signaling pathway GO:0046872 F metal ion binding GO:0047238 F glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity GO:0050510 F N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity GO:0051216 P cartilage development GO:0051923 P sulfation GO:0060349 P bone morphogenesis
1015	O_BomoASG10914_5prime_partial:A_BomoASG_c26662_g1_i1 128bp	Bomo_Chr21
1016	O_BomoASG10915_complete:A_BomoASG_c26662_g1_i1 106bp	Bomo_Chr21
1017	O_BomoASG10916_5prime_partial:A_BomoASG_c26663_g1_i1 291bp	Bomo_Chr1	deformed_epidermal_autoregulatory_factor_1_isoform_X3_[Bombyx_mori]	GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005634 C nucleus GO:0005700 C polytene chromosome GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006357 P regulation of transcription by RNA polymerase II GO:0008270 F zinc ion binding GO:0009792 P embryo development ending in birth or egg hatching GO:0043565 F sequence-specific DNA binding GO:0045893 P positive regulation of transcription, DNA-templated GO:0046872 F metal ion binding GO:0050776 P regulation of immune response GO:2000026 P regulation of multicellular organismal development
1018	O_BomoASG10917_internal:A_BomoASG_c26663_g1_i2 133bp	Bomo_Chr1	deformed_epidermal_autoregulatory_factor_1_isoform_X1_[Bombyx_mori]	GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005634 C nucleus GO:0005700 C polytene chromosome GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006357 P regulation of transcription by RNA polymerase II GO:0008270 F zinc ion binding GO:0009792 P embryo development ending in birth or egg hatching GO:0043565 F sequence-specific DNA binding GO:0045893 P positive regulation of transcription, DNA-templated GO:0046872 F metal ion binding GO:0050776 P regulation of immune response GO:2000026 P regulation of multicellular organismal development
1019	O_BomoASG10918_internal:A_BomoASG_c26663_g1_i3 153bp	Bomo_Chr1	deformed_epidermal_autoregulatory_factor_1_isoform_X1_[Bombyx_mori]	GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005634 C nucleus GO:0005700 C polytene chromosome GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006357 P regulation of transcription by RNA polymerase II GO:0008270 F zinc ion binding GO:0009792 P embryo development ending in birth or egg hatching GO:0043565 F sequence-specific DNA binding GO:0045893 P positive regulation of transcription, DNA-templated GO:0046872 F metal ion binding GO:0050776 P regulation of immune response GO:2000026 P regulation of multicellular organismal development
1020	O_BomoASG10919_complete:A_BomoASG_c26664_g1_i1 1800bp	Bomo_Chr25	LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101741510_[Bombyx_mori]	GO:0004197 F cysteine-type endopeptidase activity GO:0005615 C extracellular space GO:0005764 C lysosome GO:0006508 P proteolysis GO:0008233 F peptidase activity GO:0008234 F cysteine-type peptidase activity GO:0016787 F hydrolase activity GO:0022416 P chaeta development GO:0035071 P salivary gland cell autophagic cell death GO:0035220 P wing disc development GO:0045169 C fusome GO:0048102 P autophagic cell death GO:0051603 P proteolysis involved in cellular protein catabolic process GO:0098595 C perivitelline space