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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
961 O_BomoASG10866_5prime_partial:A_BomoASG_c26632_g1_i1
116bp
962 O_BomoASG10867_complete:A_BomoASG_c26633_g2_i1
217bp
 glutathione_S-transferase_delta_2_[Bombyx_mori]
GO:0004364 F glutathione transferase activity
GO:0008152 P metabolic process
GO:0016740 F transferase activity
963 O_BomoASG10868_internal:A_BomoASG_c26634_g1_i1
198bp
964 O_BomoASG10869_complete:A_BomoASG_c26634_g1_i1
105bp
965 O_BomoASG1086_complete:A_BomoASG_c6530_g1_i2
431bp
 probable_methylmalonate-semialdehyde_dehydrogenase_[acylating],_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0004491 F methylmalonate-semialdehyde dehydrogenase (acylating) activity
GO:0005739 C mitochondrion
GO:0006573 P valine metabolic process
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0018478 F malonate-semialdehyde dehydrogenase (acetylating) activity
GO:0019859 P thymine metabolic process
GO:0055114 P obsolete oxidation-reduction process
966 O_BomoASG10870_complete:A_BomoASG_c26635_g1_i1
192bp
 calcium_channel_flower_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005262 F calcium channel activity
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0006897 P endocytosis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030285 C integral component of synaptic vesicle membrane
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
GO:0046530 P photoreceptor cell differentiation
GO:0048488 P synaptic vesicle endocytosis
GO:0070588 P calcium ion transmembrane transport
967 O_BomoASG10871_3prime_partial:A_BomoASG_c26635_g1_i1
102bp
968 O_BomoASG10872_5prime_partial:A_BomoASG_c26636_g1_i1
134bp
 hypothetical_protein_KGM_208270_[Danaus_plexippus_plexippus]
969 O_BomoASG10873_complete:A_BomoASG_c26636_g1_i2
175bp
 hypothetical_protein_KGM_208270_[Danaus_plexippus_plexippus]
970 O_BomoASG10874_complete:A_BomoASG_c26636_g1_i3
175bp
 hypothetical_protein_KGM_208270_[Danaus_plexippus_plexippus]
971 O_BomoASG10875_internal:A_BomoASG_c26637_g1_i1
347bp
 uncharacterized_protein_LOC101743360_isoform_X2_[Bombyx_mori]
972 O_BomoASG10876_internal:A_BomoASG_c26637_g1_i2
230bp
 uncharacterized_protein_LOC101743360_isoform_X5_[Bombyx_mori]
973 O_BomoASG10877_internal:A_BomoASG_c26637_g1_i3
264bp
 uncharacterized_protein_LOC101743360_isoform_X5_[Bombyx_mori]
974 O_BomoASG10878_5prime_partial:A_BomoASG_c26637_g1_i4
178bp
 uncharacterized_protein_LOC101743360_isoform_X5_[Bombyx_mori]
975 O_BomoASG10879_3prime_partial:A_BomoASG_c26637_g1_i5
105bp
 uncharacterized_protein_LOC101743360_isoform_X5_[Bombyx_mori]
976 O_BomoASG1087_complete:A_BomoASG_c6531_g1_i1
349bp
 torsin-like_protein_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005635 C nuclear envelope
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0006457 P protein folding
GO:0016887 F ATP hydrolysis activity
GO:0040011 P locomotion
GO:0042053 P regulation of dopamine metabolic process
GO:0043104 P positive regulation of GTP cyclohydrolase I activity
GO:0048085 P adult chitin-containing cuticle pigmentation
GO:0051085 P chaperone cofactor-dependent protein refolding
GO:0071426 P obsolete ribonucleoprotein complex export from nucleus
977 O_BomoASG10880_3prime_partial:A_BomoASG_c26637_g1_i6
172bp
 uncharacterized_protein_LOC101743360_isoform_X5_[Bombyx_mori]
978 O_BomoASG10881_3prime_partial:A_BomoASG_c26640_g2_i1
106bp
 39S_ribosomal_protein_L55,_mitochondrial_[Bombyx_mori]
GO:0003700 F DNA-binding transcription factor activity
GO:0003735 F structural constituent of ribosome
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006355 P regulation of transcription, DNA-templated
GO:0006412 P translation
GO:0007275 P multicellular organism development
GO:0030529 C ribonucleoprotein complex
979 O_BomoASG10882_internal:A_BomoASG_c26644_g1_i1
281bp
 EN_protein_binding/engrailed_nuclear_homeoprotein-regulated_protein_[Bombyx_mori]
980 O_BomoASG10883_complete:A_BomoASG_c26644_g1_i1
126bp
981 O_BomoASG10884_complete:A_BomoASG_c26644_g1_i1
116bp
982 O_BomoASG10885_complete:A_BomoASG_c26646_g1_i1
139bp
 U2_small_nuclear_ribonucleoprotein_A'_[Helicoverpa_armigera]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
983 O_BomoASG10886_complete:A_BomoASG_c26646_g1_i3
259bp
 U2_small_nuclear_ribonucleoprotein_A'_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
984 O_BomoASG10887_internal:A_BomoASG_c26647_g1_i1
263bp
 LOW_QUALITY_PROTEIN:_protein_bark_beetle_[Bombyx_mori]
GO:0005044 F scavenger receptor activity
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005918 C septate junction
GO:0005923 C bicellular tight junction
GO:0006898 P receptor-mediated endocytosis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030246 F carbohydrate binding
GO:0034976 P response to endoplasmic reticulum stress
GO:0035002 P liquid clearance, open tracheal system
GO:0035159 P regulation of tube length, open tracheal system
GO:0045217 P cell-cell junction maintenance
GO:0061689 C tricellular tight junction
GO:0090557 P establishment of endothelial intestinal barrier
GO:1904274 P tricellular tight junction assembly
985 O_BomoASG10888_internal:A_BomoASG_c26647_g2_i1
197bp
 LOW_QUALITY_PROTEIN:_protein_bark_beetle_[Bombyx_mori]
GO:0005044 F scavenger receptor activity
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005918 C septate junction
GO:0005923 C bicellular tight junction
GO:0006898 P receptor-mediated endocytosis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030246 F carbohydrate binding
GO:0034976 P response to endoplasmic reticulum stress
GO:0035002 P liquid clearance, open tracheal system
GO:0035159 P regulation of tube length, open tracheal system
GO:0045217 P cell-cell junction maintenance
GO:0061689 C tricellular tight junction
GO:0090557 P establishment of endothelial intestinal barrier
GO:1904274 P tricellular tight junction assembly
986 O_BomoASG10889_complete:A_BomoASG_c26649_g1_i1
383bp
 loquacious_isoform_X3_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016020 C membrane
GO:0019899 F enzyme binding
GO:0030422 P production of siRNA involved in RNA interference
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0034599 P cellular response to oxidative stress
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0042473 P outer ear morphogenesis
GO:0042474 P middle ear morphogenesis
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048705 P skeletal system morphogenesis
GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
987 O_BomoASG1088_internal:A_BomoASG_c6537_g1_i1
141bp
 NAD-dependent_protein_deacetylase_sirtuin-6_[Bombyx_mori]
GO:0005634 C nucleus
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0070403 F NAD+ binding
988 O_BomoASG10890_complete:A_BomoASG_c26649_g1_i2
383bp
 loquacious_isoform_X3_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016020 C membrane
GO:0019899 F enzyme binding
GO:0030422 P production of siRNA involved in RNA interference
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0034599 P cellular response to oxidative stress
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0042473 P outer ear morphogenesis
GO:0042474 P middle ear morphogenesis
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048705 P skeletal system morphogenesis
GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
989 O_BomoASG10891_complete:A_BomoASG_c26649_g1_i3
383bp
 loquacious_isoform_X3_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016020 C membrane
GO:0019899 F enzyme binding
GO:0030422 P production of siRNA involved in RNA interference
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0034599 P cellular response to oxidative stress
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0042473 P outer ear morphogenesis
GO:0042474 P middle ear morphogenesis
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048705 P skeletal system morphogenesis
GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
990 O_BomoASG10892_internal:A_BomoASG_c26650_g1_i2
125bp
 BRCA1-associated_protein_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007265 P Ras protein signal transduction
GO:0008139 F nuclear localization sequence binding
GO:0008270 F zinc ion binding
GO:0009968 P negative regulation of signal transduction
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031965 C nuclear membrane
GO:0042802 F identical protein binding
GO:0043130 F ubiquitin binding
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
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