Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
1021	O_BomoASG1091_complete:A_BomoASG_c6541_g1_i1 139bp	Bomo_Chr26
1022	O_BomoASG10920_3prime_partial:A_BomoASG_c26664_g1_i2 925bp	Bomo_Chr25	LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101741510_[Bombyx_mori]	GO:0004869 F cysteine-type endopeptidase inhibitor activity GO:0005576 C extracellular region GO:0010466 P negative regulation of peptidase activity GO:0010951 P negative regulation of endopeptidase activity GO:0030414 F peptidase inhibitor activity
1023	O_BomoASG10921_5prime_partial:A_BomoASG_c26664_g1_i2 112bp	Bomo_Chr25
1024	O_BomoASG10922_complete:A_BomoASG_c26665_g1_i1 1310bp	Bomo_Chr12	leucine-rich_PPR_motif-containing_protein,_mitochondrial_[Bombyx_mori]	GO:0000794 C condensed nuclear chromosome GO:0000961 P negative regulation of mitochondrial RNA catabolic process GO:0003677 F DNA binding GO:0003697 F single-stranded DNA binding GO:0003723 F RNA binding GO:0005515 F protein binding GO:0005634 C nucleus GO:0005637 C nuclear inner membrane GO:0005640 C nuclear outer membrane GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0005739 C mitochondrion GO:0005856 C cytoskeleton GO:0005874 C microtubule GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006810 P transport GO:0016020 C membrane GO:0030529 C ribonucleoprotein complex GO:0031625 F ubiquitin protein ligase binding GO:0042645 C mitochondrial nucleoid GO:0044822 F RNA binding GO:0048471 C perinuclear region of cytoplasm GO:0048487 F beta-tubulin binding GO:0051015 F actin filament binding GO:0051028 P mRNA transport GO:0070129 P regulation of mitochondrial translation
1025	O_BomoASG10923_5prime_partial:A_BomoASG_c26668_g1_i1 121bp	Bomo_Chr5	uncharacterized_protein_LOC101746063_isoform_X2_[Bombyx_mori]
1026	O_BomoASG10924_3prime_partial:A_BomoASG_c26671_g1_i2 177bp	Bomo_Chr19	transient_receptor_potential_cation_channel_trpm_isoform_X7_[Bombyx_mori]	GO:0005216 F ion channel activity GO:0005261 F cation channel activity GO:0006810 P transport GO:0006811 P ion transport GO:0007005 P mitochondrion organization GO:0010960 P magnesium ion homeostasis GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016049 P cell growth GO:0034220 P ion transmembrane transport GO:0034703 C cation channel complex GO:0043052 P thermotaxis GO:0046873 F metal ion transmembrane transporter activity GO:0051262 P protein tetramerization GO:0055069 P zinc ion homeostasis GO:0055085 P transmembrane transport GO:0070838 P metal ion transport GO:0097682 F intracellular phosphatidylinositol-3,5-bisphosphate-sensitive cation channel activity GO:0098655 P cation transmembrane transport
1027	O_BomoASG10925_5prime_partial:A_BomoASG_c26674_g1_i1 286bp	Bomo_Chr11	verprolin_isoform_X3_[Bombyx_mori]
1028	O_BomoASG10926_complete:A_BomoASG_c26674_g1_i1 111bp	Bomo_Chr11
1029	O_BomoASG10927_3prime_partial:A_BomoASG_c26675_g1_i1 281bp	Bomo_Chr4	L-threonine_dehydrogenase_[Bombyx_mori]	GO:0003824 F catalytic activity GO:0005739 C mitochondrion GO:0006567 P threonine catabolic process GO:0008743 F L-threonine 3-dehydrogenase activity GO:0016491 F oxidoreductase activity GO:0019518 P L-threonine catabolic process to glycine GO:0050662 F obsolete coenzyme binding GO:0055114 P obsolete oxidation-reduction process
1030	O_BomoASG10928_internal:A_BomoASG_c26675_g1_i2 237bp	Bomo_Chr4	L-threonine_dehydrogenase_[Bombyx_mori]	GO:0003824 F catalytic activity GO:0005739 C mitochondrion GO:0006567 P threonine catabolic process GO:0008743 F L-threonine 3-dehydrogenase activity GO:0016491 F oxidoreductase activity GO:0019518 P L-threonine catabolic process to glycine GO:0050662 F obsolete coenzyme binding GO:0055114 P obsolete oxidation-reduction process
1031	O_BomoASG10929_complete:A_BomoASG_c26677_g1_i1 355bp	Bomo_Chr19	G_protein_alpha_subunit_Go_isoform_1_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003924 F GTPase activity GO:0004871 F obsolete signal transducer activity GO:0005525 F GTP binding GO:0007165 P signal transduction GO:0007186 P G protein-coupled receptor signaling pathway GO:0007188 P adenylate cyclase-modulating G protein-coupled receptor signaling pathway GO:0008152 P metabolic process GO:0019001 F guanyl nucleotide binding GO:0031683 F G-protein beta/gamma-subunit complex binding GO:0046872 F metal ion binding
1032	O_BomoASG1092_internal:A_BomoASG_c6545_g1_i1 214bp	Bomo_Chr4	protein_Dr1_[Bombyx_mori]	GO:0000122 P negative regulation of transcription by RNA polymerase II GO:0001075 F RNA polymerase II general transcription initiation factor activity GO:0003677 F DNA binding GO:0004402 F histone acetyltransferase activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex GO:0006338 P chromatin remodeling GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0008134 F transcription factor binding GO:0016573 P histone acetylation GO:0042766 P nucleosome mobilization GO:0045892 P negative regulation of transcription, DNA-templated GO:0045893 P positive regulation of transcription, DNA-templated GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0046982 F protein heterodimerization activity GO:0051123 P RNA polymerase II preinitiation complex assembly
1033	O_BomoASG10930_complete:A_BomoASG_c26677_g1_i1 126bp	Bomo_Chr19	PREDICTED:_guanine_nucleotide-binding_protein_G(t)_subunit_alpha-1_isoform_X2_[Saimiri_boliviensis_boliviensis]
1034	O_BomoASG10931_internal:A_BomoASG_c26680_g1_i1 115bp	Bomo_Chr23
1035	O_BomoASG10932_internal:A_BomoASG_c26680_g1_i1 115bp	Bomo_Chr23
1036	O_BomoASG10933_internal:A_BomoASG_c26680_g1_i1 115bp	Bomo_Chr23	GTPase-activating_protein_CdGAPr_[Papilio_xuthus]	GO:0003674 F molecular_function GO:0005096 F GTPase activator activity GO:0005575 C cellular_component GO:0005622 C intracellular anatomical structure GO:0007165 P signal transduction GO:0007266 P Rho protein signal transduction GO:0007275 P multicellular organism development GO:0031290 P retinal ganglion cell axon guidance GO:0043547 P positive regulation of GTPase activity
1037	O_BomoASG10934_internal:A_BomoASG_c26680_g1_i1 115bp	Bomo_Chr23
1038	O_BomoASG10935_internal:A_BomoASG_c26680_g1_i2 321bp	Bomo_Chr23	GTPase-activating_protein_CdGAPr_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005096 F GTPase activator activity GO:0005575 C cellular_component GO:0005622 C intracellular anatomical structure GO:0007165 P signal transduction GO:0007266 P Rho protein signal transduction GO:0007275 P multicellular organism development GO:0031290 P retinal ganglion cell axon guidance GO:0043547 P positive regulation of GTPase activity
1039	O_BomoASG10936_5prime_partial:A_BomoASG_c26680_g1_i2 224bp	Bomo_Chr23
1040	O_BomoASG10937_5prime_partial:A_BomoASG_c26680_g1_i2 139bp	Bomo_Chr23
1041	O_BomoASG10938_internal:A_BomoASG_c26680_g2_i2 101bp	Bomo_Chr23
1042	O_BomoASG10939_3prime_partial:A_BomoASG_c26682_g1_i1 213bp	Bomo_Chr20	UPF0183_protein_CG7083_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0008150 P biological_process
1043	O_BomoASG1093_5prime_partial:A_BomoASG_c6546_g1_i1 392bp	Bomo_Chr9	tropomodulin-1_isoform_X7_[Bombyx_mori]	GO:0002119 P nematode larval development GO:0003779 F actin binding GO:0005523 F tropomyosin binding GO:0005737 C cytoplasm GO:0005856 C cytoskeleton GO:0005865 C striated muscle thin filament GO:0009792 P embryo development ending in birth or egg hatching GO:0030835 P negative regulation of actin filament depolymerization GO:0040011 P locomotion GO:0045214 P sarcomere organization GO:0051015 F actin filament binding GO:0051694 P pointed-end actin filament capping GO:0071689 P muscle thin filament assembly GO:1990357 C terminal web
1044	O_BomoASG10940_5prime_partial:A_BomoASG_c26682_g1_i1 110bp	Bomo_Chr20
1045	O_BomoASG10941_5prime_partial:A_BomoASG_c26687_g1_i1 301bp	Bomo_Chr22	tissue_inhibitor_of_metalloproteases_[Bombyx_mori]	GO:0002020 F protease binding GO:0004857 F enzyme inhibitor activity GO:0005576 C extracellular region GO:0005578 C extracellular matrix GO:0005615 C extracellular space GO:0007155 P cell adhesion GO:0007426 P tracheal outgrowth, open tracheal system GO:0007472 P wing disc morphogenesis GO:0008191 F metalloendopeptidase inhibitor activity GO:0010033 P response to organic substance GO:0010466 P negative regulation of peptidase activity GO:0010951 P negative regulation of endopeptidase activity GO:0030414 F peptidase inhibitor activity GO:0030425 C dendrite GO:0035202 P tracheal pit formation in open tracheal system GO:0042331 P phototaxis GO:0046872 F metal ion binding GO:0048526 P imaginal disc-derived wing expansion GO:0048553 P negative regulation of catalytic activity GO:0051045 P negative regulation of membrane protein ectodomain proteolysis GO:0060232 P delamination GO:0071711 P basement membrane organization
1046	O_BomoASG10942_5prime_partial:A_BomoASG_c26687_g1_i2 187bp	Bomo_Chr22	tissue_inhibitor_of_metalloproteases_[Bombyx_mori]	GO:0002020 F protease binding GO:0004857 F enzyme inhibitor activity GO:0005576 C extracellular region GO:0005578 C extracellular matrix GO:0005615 C extracellular space GO:0007155 P cell adhesion GO:0007426 P tracheal outgrowth, open tracheal system GO:0007472 P wing disc morphogenesis GO:0008191 F metalloendopeptidase inhibitor activity GO:0010033 P response to organic substance GO:0010466 P negative regulation of peptidase activity GO:0010951 P negative regulation of endopeptidase activity GO:0030414 F peptidase inhibitor activity GO:0030425 C dendrite GO:0035202 P tracheal pit formation in open tracheal system GO:0042331 P phototaxis GO:0046872 F metal ion binding GO:0048526 P imaginal disc-derived wing expansion GO:0048553 P negative regulation of catalytic activity GO:0051045 P negative regulation of membrane protein ectodomain proteolysis GO:0060232 P delamination GO:0071711 P basement membrane organization
1047	O_BomoASG10943_3prime_partial:A_BomoASG_c26689_g2_i1 107bp	Bomo_Chr26
1048	O_BomoASG10944_internal:A_BomoASG_c26690_g1_i1 196bp	Bomo_Chr3	nucleolar_MIF4G_domain-containing_protein_1_homolog_[Bombyx_mori]	GO:0003674 F molecular_function GO:0003723 F RNA binding GO:0005634 C nucleus GO:0005730 C nucleolus GO:0022008 P neurogenesis GO:0042274 P ribosomal small subunit biogenesis
1049	O_BomoASG10945_complete:A_BomoASG_c26690_g1_i1 110bp	Bomo_Chr3
1050	O_BomoASG10946_complete:A_BomoASG_c26691_g1_i2 100bp	Bomo_Chr27