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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9211 O_BomoASG18291_complete:A_BomoASG_c30171_g2_i3
497bp
 WASH_complex_subunit_4_isoform_X1_[Bombyx_mori]
GO:0005654 C nucleoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006810 P transport
GO:0007032 P endosome organization
GO:0015031 P protein transport
GO:0016197 P endosomal transport
GO:0031083 C BLOC-1 complex
GO:0071203 C WASH complex
9212 O_BomoASG18292_5prime_partial:A_BomoASG_c30173_g1_i1
117bp
 F-box/LRR-repeat_protein_14_[Bombyx_mori]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008283 P cell population proliferation
GO:0016567 P protein ubiquitination
GO:0019005 C SCF ubiquitin ligase complex
GO:0031146 P SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0051301 P cell division
9213 O_BomoASG18293_5prime_partial:A_BomoASG_c30173_g1_i2
299bp
 F-box/LRR-repeat_protein_14_[Bombyx_mori]
GO:0005515 F protein binding
9214 O_BomoASG18294_internal:A_BomoASG_c30174_g1_i1
115bp
 conserved_oligomeric_Golgi_complex_subunit_6_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017119 C Golgi transport complex
GO:0019233 P sensory perception of pain
9215 O_BomoASG18295_3prime_partial:A_BomoASG_c30174_g1_i2
295bp
 conserved_oligomeric_Golgi_complex_subunit_6_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017119 C Golgi transport complex
GO:0019233 P sensory perception of pain
9216 O_BomoASG18296_internal:A_BomoASG_c30174_g2_i1
324bp
 conserved_oligomeric_Golgi_complex_subunit_6_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017119 C Golgi transport complex
GO:0019233 P sensory perception of pain
9217 O_BomoASG18297_internal:A_BomoASG_c30175_g1_i1
134bp
 polypeptide_N-acetylgalactosaminyltransferase_10_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003674 F molecular_function
GO:0004653 F polypeptide N-acetylgalactosaminyltransferase activity
GO:0005575 C cellular_component
GO:0005794 C Golgi apparatus
GO:0006486 P protein glycosylation
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030246 F carbohydrate binding
GO:0046872 F metal ion binding
9218 O_BomoASG18298_internal:A_BomoASG_c30175_g1_i1
134bp
9219 O_BomoASG18299_5prime_partial:A_BomoASG_c30175_g1_i1
109bp
9220 O_BomoASG1829_3prime_partial:A_BomoASG_c11852_g1_i1
135bp
9221 O_BomoASG182_3prime_partial:A_BomoASG_c1424_g1_i1
100bp
9222 O_BomoASG18300_3prime_partial:A_BomoASG_c30175_g1_i2
479bp
 polypeptide_N-acetylgalactosaminyltransferase_10_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003674 F molecular_function
GO:0004653 F polypeptide N-acetylgalactosaminyltransferase activity
GO:0005575 C cellular_component
GO:0005794 C Golgi apparatus
GO:0006486 P protein glycosylation
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030246 F carbohydrate binding
GO:0046872 F metal ion binding
9223 O_BomoASG18301_5prime_partial:A_BomoASG_c30175_g1_i2
213bp
9224 O_BomoASG18302_internal:A_BomoASG_c30177_g1_i1
1168bp
 probable_ATP-dependent_RNA_helicase_YTHDC2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006396 P RNA processing
GO:0008186 F ATP-dependent activity, acting on RNA
GO:0016787 F hydrolase activity
GO:0034612 P response to tumor necrosis factor
GO:0044822 F RNA binding
GO:0044829 P positive regulation by host of viral genome replication
GO:0070063 F RNA polymerase binding
GO:0070555 P response to interleukin-1
GO:1990247 F N6-methyladenosine-containing RNA binding
9225 O_BomoASG18303_complete:A_BomoASG_c30177_g1_i1
303bp
9226 O_BomoASG18304_complete:A_BomoASG_c30177_g1_i1
177bp
9227 O_BomoASG18305_complete:A_BomoASG_c30177_g1_i1
176bp
9228 O_BomoASG18306_complete:A_BomoASG_c30177_g1_i1
136bp
9229 O_BomoASG18307_complete:A_BomoASG_c30177_g1_i1
129bp
9230 O_BomoASG18308_complete:A_BomoASG_c30177_g1_i1
109bp
9231 O_BomoASG18309_internal:A_BomoASG_c30177_g1_i2
189bp
 probable_ATP-dependent_RNA_helicase_YTHDC2_[Bombyx_mori]
9232 O_BomoASG1830_complete:A_BomoASG_c11854_g1_i1
495bp
 protein_LTV1_homolog_[Bombyx_mori]
GO:0000056 P ribosomal small subunit export from nucleus
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0006364 P rRNA processing
GO:0008150 P biological_process
GO:0016049 P cell growth
GO:0022627 C cytosolic small ribosomal subunit
GO:0042023 P DNA endoreduplication
GO:0042274 P ribosomal small subunit biogenesis
GO:0045793 P positive regulation of cell size
9233 O_BomoASG18310_complete:A_BomoASG_c30177_g1_i2
129bp
9234 O_BomoASG18311_5prime_partial:A_BomoASG_c30178_g1_i1
862bp
 cadherin-99C_[Bombyx_mori]
GO:0001750 C photoreceptor outer segment
GO:0001964 P startle response
GO:0002009 P morphogenesis of an epithelium
GO:0005509 F calcium ion binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007601 P visual perception
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0007628 P adult walking behavior
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032420 C stereocilium
GO:0032421 C stereocilium bundle
GO:0035058 P non-motile cilium assembly
GO:0035264 P multicellular organism growth
GO:0042491 P inner ear auditory receptor cell differentiation
GO:0048839 P inner ear development
GO:0050910 P detection of mechanical stimulus involved in sensory perception of sound
GO:0050973 P detection of mechanical stimulus involved in equilibrioception
GO:0051017 P actin filament bundle assembly
GO:0060013 P righting reflex
GO:0060088 P auditory receptor cell stereocilium organization
GO:0060122 P inner ear receptor cell stereocilium organization
9235 O_BomoASG18312_5prime_partial:A_BomoASG_c30178_g1_i2
343bp
 cadherin-99C_[Bombyx_mori]
9236 O_BomoASG18313_5prime_partial:A_BomoASG_c30178_g1_i3
404bp
 cadherin-99C_[Bombyx_mori]
9237 O_BomoASG18314_5prime_partial:A_BomoASG_c30180_g1_i2
265bp
 GPN-loop_GTPase_1-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
9238 O_BomoASG18315_complete:A_BomoASG_c30180_g1_i2
126bp
9239 O_BomoASG18316_complete:A_BomoASG_c30180_g1_i3
374bp
 GPN-loop_GTPase_1-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
9240 O_BomoASG18317_complete:A_BomoASG_c30180_g1_i3
126bp
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