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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7771 O_BomoASG16996_complete:A_BomoASG_c29677_g1_i2
345bp
 protein_NDRG3_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0007283 P spermatogenesis
GO:0030154 P cell differentiation
GO:0030308 P negative regulation of cell growth
GO:0070062 C extracellular exosome
7772 O_BomoASG16997_complete:A_BomoASG_c29677_g1_i2
131bp
 hypothetical_protein_ALC53_07882,_partial_[Atta_colombica]
7773 O_BomoASG16998_complete:A_BomoASG_c29677_g1_i2
106bp
7774 O_BomoASG16999_complete:A_BomoASG_c29677_g1_i3
345bp
 protein_NDRG3_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0007283 P spermatogenesis
GO:0030154 P cell differentiation
GO:0030308 P negative regulation of cell growth
GO:0070062 C extracellular exosome
7775 O_BomoASG1699_5prime_partial:A_BomoASG_c10738_g1_i1
106bp
7776 O_BomoASG169_internal:A_BomoASG_c1322_g1_i1
100bp
7777 O_BomoASG16_5prime_partial:A_BomoASG_c130_g1_i1
141bp
7778 O_BomoASG17000_complete:A_BomoASG_c29677_g1_i3
131bp
 hypothetical_protein_ALC53_07882,_partial_[Atta_colombica]
7779 O_BomoASG17001_5prime_partial:A_BomoASG_c29678_g1_i1
190bp
 lipopolysaccharide-induced_tumor_necrosis_factor-alpha_factor_homolog_isoform_X2_[Bombyx_mori]
GO:0001817 P regulation of cytokine production
GO:0004871 F obsolete signal transducer activity
GO:0005576 C extracellular region
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007165 P signal transduction
GO:0007568 P aging
GO:0016020 C membrane
GO:0032496 P response to lipopolysaccharide
GO:0042347 P negative regulation of NIK/NF-kappaB signaling
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043231 C intracellular membrane-bounded organelle
GO:0050699 F WW domain binding
GO:0071222 P cellular response to lipopolysaccharide
7780 O_BomoASG17002_complete:A_BomoASG_c29678_g1_i2
139bp
 lipopolysaccharide-induced_tumor_necrosis_factor-alpha_factor_homolog_isoform_X3_[Bombyx_mori]
GO:0001817 P regulation of cytokine production
GO:0004871 F obsolete signal transducer activity
GO:0005576 C extracellular region
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007165 P signal transduction
GO:0007568 P aging
GO:0016020 C membrane
GO:0032496 P response to lipopolysaccharide
GO:0042347 P negative regulation of NIK/NF-kappaB signaling
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043231 C intracellular membrane-bounded organelle
GO:0050699 F WW domain binding
GO:0071222 P cellular response to lipopolysaccharide
7781 O_BomoASG17003_3prime_partial:A_BomoASG_c29679_g1_i1
133bp
 PREDICTED:_serine/threonine-protein_phosphatase_2A_56_kDa_regulatory_subunit_gamma_isoform-like_isoform_X2_[Amyelois_transitella]
GO:0000159 C protein phosphatase type 2A complex
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006470 P protein dephosphorylation
GO:0007165 P signal transduction
GO:0007399 P nervous system development
GO:0008601 F protein phosphatase regulator activity
GO:0034047 P regulation of phosphoprotein phosphatase activity
7782 O_BomoASG17004_5prime_partial:A_BomoASG_c29679_g1_i1
100bp
7783 O_BomoASG17005_complete:A_BomoASG_c29679_g1_i3
562bp
 PREDICTED:_serine/threonine-protein_phosphatase_2A_56_kDa_regulatory_subunit_gamma_isoform-like_isoform_X3_[Amyelois_transitella]
GO:0000159 C protein phosphatase type 2A complex
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006470 P protein dephosphorylation
GO:0007165 P signal transduction
GO:0007399 P nervous system development
GO:0008601 F protein phosphatase regulator activity
GO:0034047 P regulation of phosphoprotein phosphatase activity
7784 O_BomoASG17006_complete:A_BomoASG_c29679_g1_i3
122bp
 serine/threonine_protein_phosphatase_2A_[Culex_quinquefasciatus]
7785 O_BomoASG17007_complete:A_BomoASG_c29682_g1_i1
530bp
 stress-activated_map_kinase-interacting_protein_1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005829 C cytosol
GO:0006915 P apoptotic process
GO:0031932 C TORC2 complex
7786 O_BomoASG17008_5prime_partial:A_BomoASG_c29682_g1_i2
379bp
 stress-activated_map_kinase-interacting_protein_1_[Bombyx_mori]
GO:0001932 P regulation of protein phosphorylation
GO:0003674 F molecular_function
GO:0006915 P apoptotic process
GO:0019901 F protein kinase binding
GO:0031932 C TORC2 complex
GO:0048813 P dendrite morphogenesis
GO:0051124 P synaptic assembly at neuromuscular junction
7787 O_BomoASG17009_3prime_partial:A_BomoASG_c29683_g1_i1
395bp
 angiogenic_factor_with_G_patch_and_FHA_domains_1_isoform_X1_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0001570 P vasculogenesis
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0030154 P cell differentiation
GO:0045766 P positive regulation of angiogenesis
GO:0048471 C perinuclear region of cytoplasm
7788 O_BomoASG1700_internal:A_BomoASG_c10742_g1_i1
103bp
 trafficking_protein_particle_complex_subunit_10_[Bombyx_mori]
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0016192 P vesicle-mediated transport
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0030008 C TRAPP complex
GO:0030425 C dendrite
GO:0034498 P early endosome to Golgi transport
GO:0042995 C cell projection
GO:0043087 P regulation of GTPase activity
GO:0043204 C perikaryon
GO:0043547 P positive regulation of GTPase activity
GO:1990071 C TRAPPII protein complex
7789 O_BomoASG17010_complete:A_BomoASG_c29683_g1_i1
261bp
 angiogenic_factor_with_G_patch_and_FHA_domains_1_isoform_X2_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0003676 F nucleic acid binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0030154 P cell differentiation
GO:0045766 P positive regulation of angiogenesis
GO:0048471 C perinuclear region of cytoplasm
7790 O_BomoASG17011_5prime_partial:A_BomoASG_c29683_g1_i1
185bp
7791 O_BomoASG17012_3prime_partial:A_BomoASG_c29683_g1_i2
640bp
 angiogenic_factor_with_G_patch_and_FHA_domains_1_isoform_X1_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0001570 P vasculogenesis
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0030154 P cell differentiation
GO:0045766 P positive regulation of angiogenesis
GO:0048471 C perinuclear region of cytoplasm
7792 O_BomoASG17013_5prime_partial:A_BomoASG_c29683_g1_i2
185bp
7793 O_BomoASG17014_3prime_partial:A_BomoASG_c29683_g1_i3
544bp
 angiogenic_factor_with_G_patch_and_FHA_domains_1_isoform_X2_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0003676 F nucleic acid binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0030154 P cell differentiation
GO:0045766 P positive regulation of angiogenesis
GO:0048471 C perinuclear region of cytoplasm
7794 O_BomoASG17015_5prime_partial:A_BomoASG_c29683_g1_i3
185bp
7795 O_BomoASG17016_internal:A_BomoASG_c29683_g1_i4
386bp
 angiogenic_factor_with_G_patch_and_FHA_domains_1_isoform_X1_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0001570 P vasculogenesis
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0030154 P cell differentiation
GO:0045766 P positive regulation of angiogenesis
GO:0048471 C perinuclear region of cytoplasm
7796 O_BomoASG17017_5prime_partial:A_BomoASG_c29683_g1_i4
185bp
7797 O_BomoASG17018_complete:A_BomoASG_c29685_g1_i1
222bp
 exosome_complex_component_RRP46_isoform_X1_[Bombyx_mori]
GO:0000176 C nuclear exosome (RNase complex)
GO:0000177 C cytoplasmic exosome (RNase complex)
GO:0000178 C exosome (RNase complex)
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006401 P RNA catabolic process
GO:0016075 P rRNA catabolic process
GO:0031125 P rRNA 3'-end processing
GO:0034427 P nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
GO:0034475 P U4 snRNA 3'-end processing
GO:0035327 C euchromatin
GO:0043928 P exonucleolytic catabolism of deadenylated mRNA
GO:0045006 P DNA deamination
GO:0051607 P defense response to virus
GO:0071028 P nuclear mRNA surveillance
GO:0071051 P polyadenylation-dependent snoRNA 3'-end processing
7798 O_BomoASG17019_complete:A_BomoASG_c29685_g1_i2
222bp
 exosome_complex_component_RRP46_isoform_X1_[Bombyx_mori]
GO:0000176 C nuclear exosome (RNase complex)
GO:0000177 C cytoplasmic exosome (RNase complex)
GO:0000178 C exosome (RNase complex)
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006401 P RNA catabolic process
GO:0016075 P rRNA catabolic process
GO:0031125 P rRNA 3'-end processing
GO:0034427 P nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
GO:0034475 P U4 snRNA 3'-end processing
GO:0035327 C euchromatin
GO:0043928 P exonucleolytic catabolism of deadenylated mRNA
GO:0045006 P DNA deamination
GO:0051607 P defense response to virus
GO:0071028 P nuclear mRNA surveillance
GO:0071051 P polyadenylation-dependent snoRNA 3'-end processing
7799 O_BomoASG1701_3prime_partial:A_BomoASG_c10769_g1_i1
193bp
 uncharacterized_protein_LOC101746725_[Bombyx_mori]
7800 O_BomoASG17020_complete:A_BomoASG_c29686_g1_i1
1109bp
 LOW_QUALITY_PROTEIN:_regulator_of_nonsense_transcripts_2_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0001889 P liver development
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006406 P mRNA export from nucleus
GO:0031100 P animal organ regeneration
GO:0035145 C exon-exon junction complex
GO:0042162 F telomeric DNA binding
GO:0048471 C perinuclear region of cytoplasm
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