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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7741 O_BomoASG16969_complete:A_BomoASG_c29668_g1_i1
112bp
7742 O_BomoASG1696_complete:A_BomoASG_c10733_g1_i1
178bp
 EKC/KEOPS_complex_subunit_TPRKB-like_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008033 P tRNA processing
GO:0019901 F protein kinase binding
7743 O_BomoASG16970_complete:A_BomoASG_c29668_g1_i1
107bp
7744 O_BomoASG16971_complete:A_BomoASG_c29668_g1_i2
610bp
 PAB-dependent_poly(A)-specific_ribonuclease_subunit_PAN3_isoform_X7_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0000932 C P-body
GO:0004672 F protein kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0006468 P protein phosphorylation
GO:0010606 P positive regulation of cytoplasmic mRNA processing body assembly
GO:0031251 C PAN complex
GO:0044822 F RNA binding
7745 O_BomoASG16972_complete:A_BomoASG_c29668_g1_i2
112bp
7746 O_BomoASG16973_complete:A_BomoASG_c29668_g1_i2
107bp
7747 O_BomoASG16974_complete:A_BomoASG_c29668_g1_i3
605bp
 PAB-dependent_poly(A)-specific_ribonuclease_subunit_PAN3_isoform_X8_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0000932 C P-body
GO:0004672 F protein kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0006468 P protein phosphorylation
GO:0010606 P positive regulation of cytoplasmic mRNA processing body assembly
GO:0031251 C PAN complex
GO:0044822 F RNA binding
7748 O_BomoASG16975_complete:A_BomoASG_c29668_g1_i3
112bp
7749 O_BomoASG16976_complete:A_BomoASG_c29668_g1_i3
107bp
7750 O_BomoASG16977_complete:A_BomoASG_c29671_g1_i1
1076bp
 Talin-1_[Papilio_machaon]
GO:0001726 C ruffle
GO:0003779 F actin binding
GO:0005178 F integrin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007044 P cell-substrate junction assembly
GO:0007155 P cell adhesion
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0030274 F LIM domain binding
GO:0030866 P cortical actin cytoskeleton organization
GO:0032403 F protein-containing complex binding
GO:0032587 C ruffle membrane
GO:0042995 C cell projection
GO:0051015 F actin filament binding
GO:0070062 C extracellular exosome
GO:0070527 P platelet aggregation
7751 O_BomoASG16978_complete:A_BomoASG_c29671_g1_i1
162bp
7752 O_BomoASG16979_complete:A_BomoASG_c29671_g1_i1
141bp
7753 O_BomoASG1697_5prime_partial:A_BomoASG_c10738_g1_i1
318bp
 protein-tyrosine_sulfotransferase_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0006478 P peptidyl-tyrosine sulfation
GO:0008476 F protein-tyrosine sulfotransferase activity
GO:0009306 P protein secretion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
7754 O_BomoASG16980_3prime_partial:A_BomoASG_c29671_g1_i2
785bp
 talin-1_[Bombyx_mori]
GO:0001726 C ruffle
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007043 P cell-cell junction assembly
GO:0007155 P cell adhesion
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0045202 C synapse
GO:0051015 F actin filament binding
7755 O_BomoASG16981_5prime_partial:A_BomoASG_c29671_g1_i2
271bp
7756 O_BomoASG16982_3prime_partial:A_BomoASG_c29671_g1_i2
233bp
7757 O_BomoASG16983_complete:A_BomoASG_c29672_g1_i1
404bp
 potassium_channel_subfamily_K_member_3_[Bombyx_mori]
GO:0005267 F potassium channel activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0015269 F calcium-activated potassium channel activity
GO:0015271 F outward rectifier potassium channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022841 F potassium ion leak channel activity
GO:0030322 P stabilization of membrane potential
GO:0071435 P potassium ion export across plasma membrane
GO:0071467 P cellular response to pH
GO:0071805 P potassium ion transmembrane transport
7758 O_BomoASG16984_5prime_partial:A_BomoASG_c29672_g1_i1
120bp
7759 O_BomoASG16985_complete:A_BomoASG_c29672_g1_i2
404bp
 potassium_channel_subfamily_K_member_3_[Bombyx_mori]
GO:0005267 F potassium channel activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0015269 F calcium-activated potassium channel activity
GO:0015271 F outward rectifier potassium channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022841 F potassium ion leak channel activity
GO:0030322 P stabilization of membrane potential
GO:0071435 P potassium ion export across plasma membrane
GO:0071467 P cellular response to pH
GO:0071805 P potassium ion transmembrane transport
7760 O_BomoASG16986_5prime_partial:A_BomoASG_c29672_g1_i2
120bp
7761 O_BomoASG16987_complete:A_BomoASG_c29673_g1_i1
246bp
 TM2_domain-containing_protein_almondex_[Bombyx_mori]
GO:0001713 P ectodermal cell fate determination
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0007219 P Notch signaling pathway
GO:0007220 P Notch receptor processing
GO:0007275 P multicellular organism development
GO:0007398 P ectoderm development
GO:0007498 P mesoderm development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0044214 C spanning component of plasma membrane
GO:0045747 P positive regulation of Notch signaling pathway
GO:0046331 P lateral inhibition
7762 O_BomoASG16988_complete:A_BomoASG_c29674_g1_i1
197bp
 LIM_domain_transcription_factor_LMO4_[Bombyx_mori]
GO:0001158 F cis-regulatory region sequence-specific DNA binding
GO:0001843 P neural tube closure
GO:0003281 P ventricular septum development
GO:0005515 F protein binding
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0021514 P ventral spinal cord interneuron differentiation
GO:0021522 P spinal cord motor neuron differentiation
GO:0021527 P spinal cord association neuron differentiation
GO:0030334 P regulation of cell migration
GO:0031252 C cell leading edge
GO:0031333 P negative regulation of protein-containing complex assembly
GO:0033674 P positive regulation of kinase activity
GO:0042659 P regulation of cell fate specification
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048538 P thymus development
GO:0050865 P regulation of cell activation
7763 O_BomoASG16989_complete:A_BomoASG_c29674_g1_i1
110bp
 putative_LIM_domain_transcription_factor_LMO4,_partial_[Operophtera_brumata]
7764 O_BomoASG1698_3prime_partial:A_BomoASG_c10738_g1_i1
188bp
7765 O_BomoASG16990_5prime_partial:A_BomoASG_c29676_g1_i1
249bp
 zinc_finger_protein_277_[Bombyx_mori]
GO:0000979 F RNA polymerase II core promoter sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0070301 P cellular response to hydrogen peroxide
GO:2000772 P regulation of cellular senescence
7766 O_BomoASG16991_complete:A_BomoASG_c29676_g1_i1
123bp
 zinc_finger_protein_277_[Bombyx_mori]
GO:0000979 F RNA polymerase II core promoter sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0070301 P cellular response to hydrogen peroxide
GO:2000772 P regulation of cellular senescence
7767 O_BomoASG16992_complete:A_BomoASG_c29676_g1_i2
252bp
 zinc_finger_protein_277_[Bombyx_mori]
GO:0000979 F RNA polymerase II core promoter sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0070301 P cellular response to hydrogen peroxide
GO:2000772 P regulation of cellular senescence
7768 O_BomoASG16993_complete:A_BomoASG_c29676_g1_i2
123bp
 zinc_finger_protein_277_[Bombyx_mori]
GO:0000979 F RNA polymerase II core promoter sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0070301 P cellular response to hydrogen peroxide
GO:2000772 P regulation of cellular senescence
7769 O_BomoASG16994_5prime_partial:A_BomoASG_c29677_g1_i1
400bp
 protein_NDRG3_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0007283 P spermatogenesis
GO:0030154 P cell differentiation
GO:0030308 P negative regulation of cell growth
GO:0070062 C extracellular exosome
7770 O_BomoASG16995_complete:A_BomoASG_c29677_g1_i1
131bp
 hypothetical_protein_ALC53_07882,_partial_[Atta_colombica]
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