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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6301 O_BomoASG15672_internal:A_BomoASG_c29173_g1_i1
681bp
 zinc_finger_protein_3_homolog_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
6302 O_BomoASG15673_complete:A_BomoASG_c29173_g1_i1
158bp
6303 O_BomoASG15674_complete:A_BomoASG_c29173_g1_i1
132bp
6304 O_BomoASG15675_complete:A_BomoASG_c29173_g1_i1
105bp
6305 O_BomoASG15676_complete:A_BomoASG_c29173_g1_i1
103bp
6306 O_BomoASG15677_internal:A_BomoASG_c29174_g1_i1
351bp
 hypothetical_protein_KGM_213789_[Danaus_plexippus_plexippus]
GO:0000922 C spindle pole
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0007165 P signal transduction
6307 O_BomoASG15678_5prime_partial:A_BomoASG_c29174_g1_i1
136bp
6308 O_BomoASG15679_3prime_partial:A_BomoASG_c29174_g1_i2
373bp
 hypothetical_protein_KGM_213789_[Danaus_plexippus_plexippus]
GO:0000922 C spindle pole
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0007165 P signal transduction
6309 O_BomoASG1567_internal:A_BomoASG_c9638_g1_i1
134bp
 uncharacterized_protein_LOC101740429_[Bombyx_mori]
6310 O_BomoASG15680_5prime_partial:A_BomoASG_c29174_g1_i2
136bp
6311 O_BomoASG15681_complete:A_BomoASG_c29175_g1_i1
375bp
 monoacylglycerol_lipase_ABHD12_isoform_X2_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0046464 P acylglycerol catabolic process
GO:0047372 F acylglycerol lipase activity
6312 O_BomoASG15682_5prime_partial:A_BomoASG_c29175_g1_i2
379bp
 monoacylglycerol_lipase_ABHD12_isoform_X1_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0046464 P acylglycerol catabolic process
GO:0047372 F acylglycerol lipase activity
6313 O_BomoASG15683_3prime_partial:A_BomoASG_c29176_g1_i1
573bp
 2',5'-phosphodiesterase_12_isoform_X1_[Bombyx_mori]
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004535 F poly(A)-specific ribonuclease activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006397 P mRNA processing
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
6314 O_BomoASG15684_complete:A_BomoASG_c29177_g1_i1
316bp
 methyltransferase-like_protein_17,_mitochondrial_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005507 F copper ion binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005840 C ribosome
GO:0006412 P translation
GO:0008150 P biological_process
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0030529 C ribonucleoprotein complex
GO:0032259 P methylation
6315 O_BomoASG15685_complete:A_BomoASG_c29177_g1_i2
441bp
 methyltransferase-like_protein_17,_mitochondrial_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005507 F copper ion binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005840 C ribosome
GO:0006412 P translation
GO:0008150 P biological_process
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0030529 C ribonucleoprotein complex
GO:0032259 P methylation
6316 O_BomoASG15686_5prime_partial:A_BomoASG_c29178_g1_i1
495bp
 ubiquitin-protein_ligase_E3C_[Bombyx_mori]
GO:0000209 P protein polyubiquitination
GO:0000502 C proteasome complex
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
6317 O_BomoASG15687_complete:A_BomoASG_c29178_g1_i1
138bp
6318 O_BomoASG15688_5prime_partial:A_BomoASG_c29178_g1_i2
495bp
 ubiquitin-protein_ligase_E3C_[Bombyx_mori]
GO:0000209 P protein polyubiquitination
GO:0000502 C proteasome complex
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
6319 O_BomoASG15689_complete:A_BomoASG_c29178_g1_i2
138bp
6320 O_BomoASG1568_5prime_partial:A_BomoASG_c9638_g1_i1
111bp
6321 O_BomoASG15690_internal:A_BomoASG_c29179_g1_i1
145bp
6322 O_BomoASG15691_internal:A_BomoASG_c29179_g1_i1
144bp
 nuclear_pore_complex_protein_Nup205_[Bombyx_mori]
GO:0000059 P obsolete protein import into nucleus, docking
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0007077 P mitotic nuclear membrane disassembly
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0017056 F structural constituent of nuclear pore
GO:0019083 P viral transcription
GO:0031047 P gene silencing by RNA
GO:0031965 C nuclear membrane
GO:0034399 C nuclear periphery
GO:0044611 C nuclear pore inner ring
GO:0051028 P mRNA transport
GO:0051292 P nuclear pore complex assembly
GO:0075733 P intracellular transport of virus
GO:1900034 P regulation of cellular response to heat
6323 O_BomoASG15692_internal:A_BomoASG_c29179_g2_i1
108bp
 nuclear_pore_complex_protein_Nup205_[Bombyx_mori]
GO:0000059 P obsolete protein import into nucleus, docking
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0007077 P mitotic nuclear membrane disassembly
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0017056 F structural constituent of nuclear pore
GO:0019083 P viral transcription
GO:0031047 P gene silencing by RNA
GO:0031965 C nuclear membrane
GO:0034399 C nuclear periphery
GO:0044611 C nuclear pore inner ring
GO:0051028 P mRNA transport
GO:0051292 P nuclear pore complex assembly
GO:0075733 P intracellular transport of virus
GO:1900034 P regulation of cellular response to heat
6324 O_BomoASG15693_internal:A_BomoASG_c29179_g2_i2
134bp
 nuclear_pore_complex_protein_Nup205_[Bombyx_mori]
GO:0000059 P obsolete protein import into nucleus, docking
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0007077 P mitotic nuclear membrane disassembly
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0017056 F structural constituent of nuclear pore
GO:0019083 P viral transcription
GO:0031047 P gene silencing by RNA
GO:0031965 C nuclear membrane
GO:0034399 C nuclear periphery
GO:0044611 C nuclear pore inner ring
GO:0051028 P mRNA transport
GO:0051292 P nuclear pore complex assembly
GO:0075733 P intracellular transport of virus
GO:1900034 P regulation of cellular response to heat
6325 O_BomoASG15694_3prime_partial:A_BomoASG_c29179_g2_i3
183bp
 nuclear_pore_complex_protein_Nup205_[Bombyx_mori]
GO:0000059 P obsolete protein import into nucleus, docking
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0007077 P mitotic nuclear membrane disassembly
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0017056 F structural constituent of nuclear pore
GO:0019083 P viral transcription
GO:0031047 P gene silencing by RNA
GO:0031965 C nuclear membrane
GO:0034399 C nuclear periphery
GO:0044611 C nuclear pore inner ring
GO:0051028 P mRNA transport
GO:0051292 P nuclear pore complex assembly
GO:0075733 P intracellular transport of virus
GO:1900034 P regulation of cellular response to heat
6326 O_BomoASG15695_3prime_partial:A_BomoASG_c29180_g1_i1
431bp
 lon_protease_homolog,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0004176 F ATP-dependent peptidase activity
GO:0004252 F serine-type endopeptidase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005777 C peroxisome
GO:0006508 P proteolysis
GO:0006515 P protein quality control for misfolded or incompletely synthesized proteins
GO:0007005 P mitochondrion organization
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0030163 P protein catabolic process
GO:0045732 P positive regulation of protein catabolic process
GO:0051131 P chaperone-mediated protein complex assembly
GO:0070361 F mitochondrial promoter sequence-specific DNA binding
6327 O_BomoASG15696_3prime_partial:A_BomoASG_c29180_g1_i2
413bp
 lon_protease_homolog,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001666 P response to hypoxia
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003727 F single-stranded RNA binding
GO:0004176 F ATP-dependent peptidase activity
GO:0004252 F serine-type endopeptidase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006508 P proteolysis
GO:0006515 P protein quality control for misfolded or incompletely synthesized proteins
GO:0007005 P mitochondrion organization
GO:0007568 P aging
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0009725 P response to hormone
GO:0010044 P response to aluminum ion
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0030163 P protein catabolic process
GO:0034599 P cellular response to oxidative stress
GO:0042645 C mitochondrial nucleoid
GO:0043531 F ADP binding
GO:0043565 F sequence-specific DNA binding
GO:0043623 P protein-containing complex assembly
GO:0051131 P chaperone-mediated protein complex assembly
GO:0051260 P protein homooligomerization
GO:0051603 P proteolysis involved in cellular protein catabolic process
GO:0051880 F G-quadruplex DNA binding
GO:0070182 F DNA polymerase binding
GO:0070361 F mitochondrial promoter sequence-specific DNA binding
GO:0070362 F mitochondrial promoter sequence-specific DNA binding
GO:0070407 P oxidation-dependent protein catabolic process
6328 O_BomoASG15697_3prime_partial:A_BomoASG_c29182_g1_i1
262bp
 ribosomal_RNA-processing_protein_7_homolog_A_[Bombyx_mori]
GO:0000028 P ribosomal small subunit assembly
GO:0000166 F nucleotide binding
GO:0001825 P blastocyst formation
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0032545 C CURI complex
GO:0034456 C UTP-C complex
GO:0044822 F RNA binding
6329 O_BomoASG15698_internal:A_BomoASG_c29182_g1_i2
230bp
 ribosomal_RNA-processing_protein_7_homolog_A_[Bombyx_mori]
GO:0000028 P ribosomal small subunit assembly
GO:0000166 F nucleotide binding
GO:0001825 P blastocyst formation
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0032545 C CURI complex
GO:0034456 C UTP-C complex
GO:0044822 F RNA binding
6330 O_BomoASG15699_complete:A_BomoASG_c29183_g1_i2
243bp
 serine/arginine-rich_splicing_factor_1A_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
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