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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6331 O_BomoASG1569_5prime_partial:A_BomoASG_c9638_g1_i1
110bp
6332 O_BomoASG156_complete:A_BomoASG_c1169_g1_i1
174bp
 DNA-directed_RNA_polymerase_II_subunit_RPB7_[Bombyx_mori]
GO:0000291 P nuclear-transcribed mRNA catabolic process, exonucleolytic
GO:0000932 C P-body
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003697 F single-stranded DNA binding
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005665 C RNA polymerase II, core complex
GO:0006351 P transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006915 P apoptotic process
GO:0031369 F translation initiation factor binding
GO:0045948 P positive regulation of translational initiation
GO:0060213 P positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
6333 O_BomoASG15700_3prime_partial:A_BomoASG_c29184_g1_i1
172bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X5_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
6334 O_BomoASG15701_complete:A_BomoASG_c29185_g1_i1
187bp
 transmembrane_protein_222_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
6335 O_BomoASG15702_complete:A_BomoASG_c29186_g1_i1
134bp
 protein_spinster_isoform_X4_[Bombyx_mori]
GO:0003376 P sphingosine-1-phosphate receptor signaling pathway
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0007040 P lysosome organization
GO:0007275 P multicellular organism development
GO:0007422 P peripheral nervous system development
GO:0007619 P courtship behavior
GO:0008333 P endosome to lysosome transport
GO:0008347 P glial cell migration
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0009267 P cellular response to starvation
GO:0010001 P glial cell differentiation
GO:0012501 P programmed cell death
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030154 P cell differentiation
GO:0031902 C late endosome membrane
GO:0031982 C vesicle
GO:0035193 P larval central nervous system remodeling
GO:0040011 P locomotion
GO:0043067 P regulation of programmed cell death
GO:0045476 P nurse cell apoptotic process
GO:0045477 P regulation of nurse cell apoptotic process
GO:0045924 P regulation of female receptivity
GO:0046624 F sphingolipid transporter activity
GO:0048477 P oogenesis
GO:0048488 P synaptic vesicle endocytosis
GO:0051124 P synaptic assembly at neuromuscular junction
GO:0055085 P transmembrane transport
GO:0090099 P negative regulation of BMP signaling pathway
6336 O_BomoASG15703_3prime_partial:A_BomoASG_c29186_g2_i1
124bp
6337 O_BomoASG15704_5prime_partial:A_BomoASG_c29186_g2_i1
116bp
 protein_spinster_isoform_X2_[Bombyx_mori]
GO:0003376 P sphingosine-1-phosphate receptor signaling pathway
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0007040 P lysosome organization
GO:0007275 P multicellular organism development
GO:0007422 P peripheral nervous system development
GO:0007619 P courtship behavior
GO:0008333 P endosome to lysosome transport
GO:0008347 P glial cell migration
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0009267 P cellular response to starvation
GO:0010001 P glial cell differentiation
GO:0012501 P programmed cell death
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030154 P cell differentiation
GO:0031902 C late endosome membrane
GO:0031982 C vesicle
GO:0035193 P larval central nervous system remodeling
GO:0040011 P locomotion
GO:0043067 P regulation of programmed cell death
GO:0045476 P nurse cell apoptotic process
GO:0045477 P regulation of nurse cell apoptotic process
GO:0045924 P regulation of female receptivity
GO:0046624 F sphingolipid transporter activity
GO:0048477 P oogenesis
GO:0048488 P synaptic vesicle endocytosis
GO:0051124 P synaptic assembly at neuromuscular junction
GO:0055085 P transmembrane transport
GO:0090099 P negative regulation of BMP signaling pathway
6338 O_BomoASG15705_3prime_partial:A_BomoASG_c29186_g3_i1
321bp
 protein_spinster_isoform_X1_[Bombyx_mori]
GO:0003376 P sphingosine-1-phosphate receptor signaling pathway
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0007040 P lysosome organization
GO:0007275 P multicellular organism development
GO:0007422 P peripheral nervous system development
GO:0007619 P courtship behavior
GO:0008333 P endosome to lysosome transport
GO:0008347 P glial cell migration
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0009267 P cellular response to starvation
GO:0010001 P glial cell differentiation
GO:0012501 P programmed cell death
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030154 P cell differentiation
GO:0031902 C late endosome membrane
GO:0031982 C vesicle
GO:0035193 P larval central nervous system remodeling
GO:0040011 P locomotion
GO:0043067 P regulation of programmed cell death
GO:0045476 P nurse cell apoptotic process
GO:0045477 P regulation of nurse cell apoptotic process
GO:0045924 P regulation of female receptivity
GO:0046624 F sphingolipid transporter activity
GO:0048477 P oogenesis
GO:0048488 P synaptic vesicle endocytosis
GO:0051124 P synaptic assembly at neuromuscular junction
GO:0055085 P transmembrane transport
GO:0090099 P negative regulation of BMP signaling pathway
6339 O_BomoASG15706_5prime_partial:A_BomoASG_c29186_g1_i2
103bp
 protein_spinster_isoform_X3_[Bombyx_mori]
GO:0003376 P sphingosine-1-phosphate receptor signaling pathway
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0007040 P lysosome organization
GO:0007275 P multicellular organism development
GO:0007422 P peripheral nervous system development
GO:0007619 P courtship behavior
GO:0008333 P endosome to lysosome transport
GO:0008347 P glial cell migration
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0009267 P cellular response to starvation
GO:0010001 P glial cell differentiation
GO:0012501 P programmed cell death
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030154 P cell differentiation
GO:0031902 C late endosome membrane
GO:0031982 C vesicle
GO:0035193 P larval central nervous system remodeling
GO:0040011 P locomotion
GO:0043067 P regulation of programmed cell death
GO:0045476 P nurse cell apoptotic process
GO:0045477 P regulation of nurse cell apoptotic process
GO:0045924 P regulation of female receptivity
GO:0046624 F sphingolipid transporter activity
GO:0048477 P oogenesis
GO:0048488 P synaptic vesicle endocytosis
GO:0051124 P synaptic assembly at neuromuscular junction
GO:0055085 P transmembrane transport
GO:0090099 P negative regulation of BMP signaling pathway
6340 O_BomoASG15707_complete:A_BomoASG_c29186_g3_i2
305bp
 protein_spinster_isoform_X1_[Bombyx_mori]
GO:0003376 P sphingosine-1-phosphate receptor signaling pathway
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0007040 P lysosome organization
GO:0007275 P multicellular organism development
GO:0007422 P peripheral nervous system development
GO:0007619 P courtship behavior
GO:0008333 P endosome to lysosome transport
GO:0008347 P glial cell migration
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0009267 P cellular response to starvation
GO:0010001 P glial cell differentiation
GO:0012501 P programmed cell death
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030154 P cell differentiation
GO:0031902 C late endosome membrane
GO:0031982 C vesicle
GO:0035193 P larval central nervous system remodeling
GO:0040011 P locomotion
GO:0043067 P regulation of programmed cell death
GO:0045476 P nurse cell apoptotic process
GO:0045477 P regulation of nurse cell apoptotic process
GO:0045924 P regulation of female receptivity
GO:0046624 F sphingolipid transporter activity
GO:0048477 P oogenesis
GO:0048488 P synaptic vesicle endocytosis
GO:0051124 P synaptic assembly at neuromuscular junction
GO:0055085 P transmembrane transport
GO:0090099 P negative regulation of BMP signaling pathway
6341 O_BomoASG15708_5prime_partial:A_BomoASG_c29186_g3_i2
110bp
6342 O_BomoASG15709_5prime_partial:A_BomoASG_c29187_g1_i1
427bp
 uncharacterized_protein_LOC105842357_[Bombyx_mori]
6343 O_BomoASG1570_internal:A_BomoASG_c9641_g1_i1
159bp
 protein_tweety_isoform_X1_[Bombyx_mori]
GO:0005254 F chloride channel activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006821 P chloride transport
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034707 C chloride channel complex
GO:1902476 P chloride transmembrane transport
6344 O_BomoASG15710_complete:A_BomoASG_c29187_g1_i1
150bp
6345 O_BomoASG15711_complete:A_BomoASG_c29187_g1_i2
491bp
 uncharacterized_protein_LOC105842357_[Bombyx_mori]
6346 O_BomoASG15712_complete:A_BomoASG_c29187_g1_i2
150bp
6347 O_BomoASG15713_internal:A_BomoASG_c29188_g1_i3
100bp
 PREDICTED:_uncharacterized_protein_LOC106139185_[Amyelois_transitella]
6348 O_BomoASG15714_internal:A_BomoASG_c29188_g1_i3
100bp
6349 O_BomoASG15715_5prime_partial:A_BomoASG_c29189_g1_i1
321bp
 LOW_QUALITY_PROTEIN:_ankyrin_repeat_domain-containing_protein_50_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0006810 P transport
GO:0015031 P protein transport
GO:1990126 P endocytic recycling
6350 O_BomoASG15716_complete:A_BomoASG_c29189_g1_i1
122bp
6351 O_BomoASG15717_5prime_partial:A_BomoASG_c29189_g1_i2
350bp
 LOW_QUALITY_PROTEIN:_ankyrin_repeat_domain-containing_protein_50_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0006810 P transport
GO:0015031 P protein transport
GO:1990126 P endocytic recycling
6352 O_BomoASG15718_complete:A_BomoASG_c29189_g1_i2
122bp
6353 O_BomoASG15719_complete:A_BomoASG_c29191_g1_i1
291bp
 uncharacterized_protein_LOC101739854_isoform_X2_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
6354 O_BomoASG1571_5prime_partial:A_BomoASG_c9641_g1_i1
102bp
6355 O_BomoASG15720_5prime_partial:A_BomoASG_c29191_g1_i1
107bp
6356 O_BomoASG15721_complete:A_BomoASG_c29192_g1_i1
210bp
 UPF0553_protein_C9orf64_homolog_[Bombyx_mori]
6357 O_BomoASG15722_5prime_partial:A_BomoASG_c29192_g1_i2
342bp
 UPF0553_protein_C9orf64_homolog_[Bombyx_mori]
6358 O_BomoASG15723_complete:A_BomoASG_c29193_g2_i1
257bp
 MRG/MORF4L-binding_protein_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043189 C H4/H2A histone acetyltransferase complex
6359 O_BomoASG15724_complete:A_BomoASG_c29193_g2_i1
108bp
6360 O_BomoASG15725_complete:A_BomoASG_c29193_g2_i2
257bp
 MRG/MORF4L-binding_protein_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043189 C H4/H2A histone acetyltransferase complex
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