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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6271 O_BomoASG15645_complete:A_BomoASG_c29160_g1_i2
119bp
6272 O_BomoASG15646_5prime_partial:A_BomoASG_c29161_g1_i1
530bp
 tetratricopeptide_repeat_protein_39B_isoform_X2_[Bombyx_mori]
6273 O_BomoASG15647_5prime_partial:A_BomoASG_c29161_g1_i2
550bp
 tetratricopeptide_repeat_protein_39B_isoform_X2_[Bombyx_mori]
6274 O_BomoASG15648_3prime_partial:A_BomoASG_c29162_g1_i1
468bp
 ubiquitin_carboxyl-terminal_hydrolase_3_[Bombyx_mori]
GO:0000278 P mitotic cell cycle
GO:0000790 C chromatin
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0031647 P regulation of protein stability
GO:0036459 F thiol-dependent deubiquitinase
GO:0042393 F histone binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
6275 O_BomoASG15649_internal:A_BomoASG_c29162_g1_i2
145bp
 ubiquitin_carboxyl-terminal_hydrolase_3_[Bombyx_mori]
GO:0000278 P mitotic cell cycle
GO:0000790 C chromatin
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0031647 P regulation of protein stability
GO:0036459 F thiol-dependent deubiquitinase
GO:0042393 F histone binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
6276 O_BomoASG1564_3prime_partial:A_BomoASG_c9626_g1_i1
161bp
 protein_Dok-7_[Bombyx_mori]
GO:0001934 P positive regulation of protein phosphorylation
GO:0005158 F insulin receptor binding
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0007528 P neuromuscular junction development
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0019901 F protein kinase binding
GO:0030054 C cell junction
GO:0031594 C neuromuscular junction
GO:0035091 F phosphatidylinositol binding
GO:0043113 P receptor clustering
GO:0045202 C synapse
GO:0061098 P positive regulation of protein tyrosine kinase activity
6277 O_BomoASG15650_5prime_partial:A_BomoASG_c29162_g2_i1
118bp
6278 O_BomoASG15651_5prime_partial:A_BomoASG_c29162_g2_i1
100bp
 ubiquitin_carboxyl-terminal_hydrolase_3_[Bombyx_mori]
GO:0000278 P mitotic cell cycle
GO:0000790 C chromatin
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0031647 P regulation of protein stability
GO:0036459 F thiol-dependent deubiquitinase
GO:0042393 F histone binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
6279 O_BomoASG15652_5prime_partial:A_BomoASG_c29163_g1_i1
339bp
 ABC_transporter_G_family_member_23_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0043190 C ATP-binding cassette (ABC) transporter complex
GO:0044351 P macropinocytosis
GO:0055085 P transmembrane transport
6280 O_BomoASG15653_5prime_partial:A_BomoASG_c29163_g1_i2
695bp
 ABC_transporter_G_family_member_23_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0043190 C ATP-binding cassette (ABC) transporter complex
GO:0044351 P macropinocytosis
GO:0055085 P transmembrane transport
6281 O_BomoASG15654_complete:A_BomoASG_c29163_g1_i2
100bp
6282 O_BomoASG15655_3prime_partial:A_BomoASG_c29164_g1_i1
397bp
 LOW_QUALITY_PROTEIN:_mediator_of_RNA_polymerase_II_transcription_subunit_14_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016592 C mediator complex
6283 O_BomoASG15656_internal:A_BomoASG_c29165_g1_i2
133bp
 PHD_finger_protein_rhinoceros_[Bombyx_mori]
6284 O_BomoASG15657_internal:A_BomoASG_c29165_g1_i3
139bp
 PHD_finger_protein_rhinoceros_[Bombyx_mori]
6285 O_BomoASG15658_internal:A_BomoASG_c29165_g1_i4
490bp
 PHD_finger_protein_rhinoceros_[Bombyx_mori]
6286 O_BomoASG15659_internal:A_BomoASG_c29166_g1_i1
111bp
 glycerol_kinase-like_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004370 F glycerol kinase activity
GO:0005524 F ATP binding
GO:0005975 P carbohydrate metabolic process
GO:0006071 P glycerol metabolic process
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019563 P glycerol catabolic process
6287 O_BomoASG1565_5prime_partial:A_BomoASG_c9626_g1_i1
121bp
6288 O_BomoASG15660_3prime_partial:A_BomoASG_c29166_g1_i2
287bp
 glycerol_kinase-like_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004370 F glycerol kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005975 P carbohydrate metabolic process
GO:0006071 P glycerol metabolic process
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0006641 P triglyceride metabolic process
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019563 P glycerol catabolic process
GO:0046167 P glycerol-3-phosphate biosynthetic process
6289 O_BomoASG15661_internal:A_BomoASG_c29166_g1_i3
163bp
 glycerol_kinase-like_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004370 F glycerol kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005975 P carbohydrate metabolic process
GO:0006071 P glycerol metabolic process
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0006641 P triglyceride metabolic process
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019563 P glycerol catabolic process
GO:0046167 P glycerol-3-phosphate biosynthetic process
6290 O_BomoASG15662_3prime_partial:A_BomoASG_c29166_g1_i4
293bp
 glycerol_kinase-like_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004370 F glycerol kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005975 P carbohydrate metabolic process
GO:0006071 P glycerol metabolic process
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0006641 P triglyceride metabolic process
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019563 P glycerol catabolic process
GO:0046167 P glycerol-3-phosphate biosynthetic process
6291 O_BomoASG15663_complete:A_BomoASG_c29167_g1_i1
177bp
 armadillo_repeat-containing_protein_7-like_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008150 P biological_process
6292 O_BomoASG15664_3prime_partial:A_BomoASG_c29167_g1_i1
149bp
 hydroxyacyl-thioester_dehydratase_type_2,_mitochondrial-like_[Bombyx_mori]
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0016829 F lyase activity
6293 O_BomoASG15665_3prime_partial:A_BomoASG_c29167_g1_i2
149bp
 hydroxyacyl-thioester_dehydratase_type_2,_mitochondrial-like_[Bombyx_mori]
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0016829 F lyase activity
6294 O_BomoASG15666_5prime_partial:A_BomoASG_c29169_g1_i2
281bp
 KAT8_regulatory_NSL_complex_subunit_2_isoform_X1_[Bombyx_mori]
GO:0000123 C histone acetyltransferase complex
GO:0005634 C nucleus
GO:0016568 P chromatin organization
GO:0043981 P histone H4-K5 acetylation
GO:0043982 P histone H4-K8 acetylation
GO:0043984 P histone H4-K16 acetylation
GO:0043995 F histone acetyltransferase activity (H4-K5 specific)
GO:0043996 F histone acetyltransferase activity (H4-K8 specific)
GO:0044545 C NSL complex
GO:0046972 F histone acetyltransferase activity (H4-K16 specific)
6295 O_BomoASG15667_5prime_partial:A_BomoASG_c29169_g1_i3
340bp
 KAT8_regulatory_NSL_complex_subunit_2_isoform_X1_[Bombyx_mori]
GO:0000123 C histone acetyltransferase complex
GO:0005634 C nucleus
GO:0016568 P chromatin organization
GO:0043981 P histone H4-K5 acetylation
GO:0043982 P histone H4-K8 acetylation
GO:0043984 P histone H4-K16 acetylation
GO:0043995 F histone acetyltransferase activity (H4-K5 specific)
GO:0043996 F histone acetyltransferase activity (H4-K8 specific)
GO:0044545 C NSL complex
GO:0046972 F histone acetyltransferase activity (H4-K16 specific)
6296 O_BomoASG15668_complete:A_BomoASG_c29170_g1_i1
349bp
 GTPase_Era,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0000028 P ribosomal small subunit assembly
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0019843 F rRNA binding
GO:0042254 P ribosome biogenesis
GO:0043024 F ribosomal small subunit binding
GO:0044822 F RNA binding
GO:0045111 C intermediate filament cytoskeleton
6297 O_BomoASG15669_5prime_partial:A_BomoASG_c29172_g2_i1
376bp
 uncharacterized_protein_LOC101738927_isoform_X1_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0006098 P pentose-phosphate shunt
GO:0009045 F xylose isomerase activity
GO:0016853 F isomerase activity
GO:0042732 P D-xylose metabolic process
GO:0046872 F metal ion binding
6298 O_BomoASG1566_internal:A_BomoASG_c9630_g1_i1
99bp
6299 O_BomoASG15670_5prime_partial:A_BomoASG_c29172_g2_i2
442bp
 uncharacterized_protein_LOC101738927_isoform_X1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005773 C vacuole
GO:0005774 C vacuolar membrane
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005975 P carbohydrate metabolic process
GO:0006098 P pentose-phosphate shunt
GO:0009045 F xylose isomerase activity
GO:0016020 C membrane
GO:0016853 F isomerase activity
GO:0042732 P D-xylose metabolic process
GO:0046872 F metal ion binding
6300 O_BomoASG15671_5prime_partial:A_BomoASG_c29172_g2_i3
103bp
 uncharacterized_protein_LOC101738927_isoform_X1_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0006098 P pentose-phosphate shunt
GO:0009045 F xylose isomerase activity
GO:0016853 F isomerase activity
GO:0042732 P D-xylose metabolic process
GO:0046872 F metal ion binding
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