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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6241 O_BomoASG15618_5prime_partial:A_BomoASG_c29154_g1_i4
190bp
 PREDICTED:_RNA-binding_protein_Musashi_homolog_Rbp6_isoform_X1_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0003729 F mRNA binding
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0008266 F poly(U) RNA binding
GO:0048864 P stem cell development
6242 O_BomoASG15619_complete:A_BomoASG_c29154_g1_i4
121bp
6243 O_BomoASG1561_internal:A_BomoASG_c9619_g1_i1
106bp
6244 O_BomoASG15620_5prime_partial:A_BomoASG_c29154_g1_i5
339bp
 RNA-binding_protein_Musashi_homolog_Rbp6_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0003729 F mRNA binding
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0008266 F poly(U) RNA binding
GO:0048864 P stem cell development
6245 O_BomoASG15621_complete:A_BomoASG_c29154_g1_i5
121bp
6246 O_BomoASG15622_5prime_partial:A_BomoASG_c29155_g1_i1
419bp
 zinc_finger_protein_Xfin_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006311 P meiotic gene conversion
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0008168 F methyltransferase activity
GO:0010845 P positive regulation of reciprocal meiotic recombination
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0046872 F metal ion binding
GO:0051321 P meiotic cell cycle
6247 O_BomoASG15623_5prime_partial:A_BomoASG_c29156_g1_i1
412bp
 uncharacterized_protein_LOC101746842_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
6248 O_BomoASG15624_complete:A_BomoASG_c29156_g1_i1
110bp
6249 O_BomoASG15625_complete:A_BomoASG_c29156_g1_i2
465bp
 uncharacterized_protein_LOC101746842_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
6250 O_BomoASG15626_complete:A_BomoASG_c29156_g1_i2
110bp
6251 O_BomoASG15627_complete:A_BomoASG_c29157_g1_i1
285bp
 forkhead_box_protein_J2_isoform_X1_[Bombyx_mori]
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0043565 F sequence-specific DNA binding
6252 O_BomoASG15628_complete:A_BomoASG_c29157_g1_i2
240bp
 forkhead_box_protein_J3_isoform_X2_[Bombyx_mori]
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0043565 F sequence-specific DNA binding
6253 O_BomoASG15629_complete:A_BomoASG_c29158_g1_i1
331bp
 PI-PLC_X_domain-containing_protein_3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004871 F obsolete signal transducer activity
GO:0005575 C cellular_component
GO:0006629 P lipid metabolic process
GO:0007165 P signal transduction
GO:0008081 F phosphoric diester hydrolase activity
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
6254 O_BomoASG1562_internal:A_BomoASG_c9622_g1_i1
154bp
 uncharacterized_protein_LOC101743535_isoform_X2_[Bombyx_mori]
6255 O_BomoASG15630_complete:A_BomoASG_c29158_g1_i1
175bp
6256 O_BomoASG15631_complete:A_BomoASG_c29158_g1_i2
179bp
 PI-PLC_X_domain-containing_protein_3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004871 F obsolete signal transducer activity
GO:0005575 C cellular_component
GO:0006629 P lipid metabolic process
GO:0007165 P signal transduction
GO:0008081 F phosphoric diester hydrolase activity
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
6257 O_BomoASG15632_complete:A_BomoASG_c29158_g1_i2
175bp
6258 O_BomoASG15633_5prime_partial:A_BomoASG_c29158_g1_i3
310bp
 PI-PLC_X_domain-containing_protein_3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004871 F obsolete signal transducer activity
GO:0005575 C cellular_component
GO:0006629 P lipid metabolic process
GO:0007165 P signal transduction
GO:0008081 F phosphoric diester hydrolase activity
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
6259 O_BomoASG15634_complete:A_BomoASG_c29158_g1_i3
175bp
6260 O_BomoASG15635_complete:A_BomoASG_c29158_g1_i4
179bp
 PI-PLC_X_domain-containing_protein_3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004871 F obsolete signal transducer activity
GO:0005575 C cellular_component
GO:0006629 P lipid metabolic process
GO:0007165 P signal transduction
GO:0008081 F phosphoric diester hydrolase activity
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
6261 O_BomoASG15636_complete:A_BomoASG_c29158_g1_i4
175bp
6262 O_BomoASG15637_complete:A_BomoASG_c29158_g1_i5
331bp
 PI-PLC_X_domain-containing_protein_3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004871 F obsolete signal transducer activity
GO:0005575 C cellular_component
GO:0006629 P lipid metabolic process
GO:0007165 P signal transduction
GO:0008081 F phosphoric diester hydrolase activity
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
6263 O_BomoASG15638_complete:A_BomoASG_c29158_g1_i5
175bp
6264 O_BomoASG15639_internal:A_BomoASG_c29159_g2_i1
527bp
 uncharacterized_protein_LOC101738149_[Bombyx_mori]
GO:0004222 F metalloendopeptidase activity
GO:0005576 C extracellular region
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0007283 P spermatogenesis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
6265 O_BomoASG1563_3prime_partial:A_BomoASG_c9624_g1_i1
749bp
 annulin_isoform_X2_[Bombyx_mori]
GO:0003810 F protein-glutamine gamma-glutamyltransferase activity
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0018149 P peptide cross-linking
GO:0046872 F metal ion binding
6266 O_BomoASG15640_3prime_partial:A_BomoASG_c29159_g2_i2
543bp
 uncharacterized_protein_LOC101738149_[Bombyx_mori]
GO:0004222 F metalloendopeptidase activity
GO:0005576 C extracellular region
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0007283 P spermatogenesis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
6267 O_BomoASG15641_complete:A_BomoASG_c29159_g2_i2
144bp
6268 O_BomoASG15642_3prime_partial:A_BomoASG_c29160_g1_i1
384bp
 ankyrin_repeat_and_sterile_alpha_motif_domain-containing_protein_1B_isoform_X3_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0014069 C postsynaptic density
GO:0015030 C Cajal body
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0042995 C cell projection
GO:0043197 C dendritic spine
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0046875 F ephrin receptor binding
6269 O_BomoASG15643_complete:A_BomoASG_c29160_g1_i1
119bp
6270 O_BomoASG15644_3prime_partial:A_BomoASG_c29160_g1_i2
473bp
 ankyrin_repeat_and_sterile_alpha_motif_domain-containing_protein_1B_isoform_X3_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0014069 C postsynaptic density
GO:0015030 C Cajal body
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0042995 C cell projection
GO:0043197 C dendritic spine
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0046875 F ephrin receptor binding
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