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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5521 O_BomoASG14970_complete:A_BomoASG_c28874_g1_i2
828bp
 c-Cbl-associated_protein_isoform_A_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005925 C focal adhesion
GO:0006936 P muscle contraction
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0008134 F transcription factor binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0031589 P cell-substrate adhesion
GO:0043410 P positive regulation of MAPK cascade
GO:0051495 P positive regulation of cytoskeleton organization
GO:0051496 P positive regulation of stress fiber assembly
5522 O_BomoASG14971_complete:A_BomoASG_c28874_g1_i2
102bp
5523 O_BomoASG14972_5prime_partial:A_BomoASG_c28874_g1_i3
481bp
 c-Cbl-associated_protein_isoform_A_[Bombyx_mori]
GO:0001725 C stress fiber
GO:0005070 F obsolete SH3/SH2 adaptor activity
GO:0005158 F insulin receptor binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005899 C insulin receptor complex
GO:0005912 C adherens junction
GO:0005913 C adherens junction
GO:0005924 C obsolete cell-substrate adherens junction
GO:0005925 C focal adhesion
GO:0006810 P transport
GO:0007015 P actin filament organization
GO:0008134 F transcription factor binding
GO:0008286 P insulin receptor signaling pathway
GO:0009967 P positive regulation of signal transduction
GO:0015758 P glucose transmembrane transport
GO:0016020 C membrane
GO:0016363 C nuclear matrix
GO:0016600 C flotillin complex
GO:0019901 F protein kinase binding
GO:0030054 C cell junction
GO:0032869 P cellular response to insulin stimulus
GO:0043149 P stress fiber assembly
GO:0045121 C membrane raft
GO:0045725 P positive regulation of glycogen biosynthetic process
GO:0046326 P positive regulation of glucose import
GO:0046889 P positive regulation of lipid biosynthetic process
GO:0048041 P focal adhesion assembly
GO:0090004 P positive regulation of protein localization to plasma membrane
5524 O_BomoASG14973_complete:A_BomoASG_c28874_g1_i3
102bp
5525 O_BomoASG14974_complete:A_BomoASG_c28875_g1_i2
629bp
 bifunctional_3'-phosphoadenosine_5'-phosphosulfate_synthase_isoform_X2_[Bombyx_mori]
GO:0000103 P sulfate assimilation
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004020 F adenylylsulfate kinase activity
GO:0004781 F sulfate adenylyltransferase (ATP) activity
GO:0005524 F ATP binding
GO:0008152 P metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
5526 O_BomoASG14975_complete:A_BomoASG_c28875_g1_i2
147bp
5527 O_BomoASG14976_3prime_partial:A_BomoASG_c28875_g1_i2
115bp
5528 O_BomoASG14977_complete:A_BomoASG_c28875_g1_i2
111bp
5529 O_BomoASG14978_5prime_partial:A_BomoASG_c28875_g1_i3
641bp
 bifunctional_3'-phosphoadenosine_5'-phosphosulfate_synthase_isoform_X3_[Bombyx_mori]
GO:0000103 P sulfate assimilation
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004020 F adenylylsulfate kinase activity
GO:0004781 F sulfate adenylyltransferase (ATP) activity
GO:0005524 F ATP binding
GO:0008152 P metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
5530 O_BomoASG14979_complete:A_BomoASG_c28875_g1_i3
147bp
5531 O_BomoASG1497_internal:A_BomoASG_c9353_g1_i1
184bp
 LOW_QUALITY_PROTEIN:_dynein_heavy_chain_8,_axonemal_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0007018 P microtubule-based movement
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016887 F ATP hydrolysis activity
GO:0030286 C dynein complex
GO:0031514 C motile cilium
GO:0036157 C outer dynein arm
GO:0042995 C cell projection
GO:0097228 C sperm principal piece
5532 O_BomoASG14980_3prime_partial:A_BomoASG_c28875_g1_i3
115bp
5533 O_BomoASG14981_complete:A_BomoASG_c28875_g1_i3
111bp
5534 O_BomoASG14982_5prime_partial:A_BomoASG_c28877_g1_i1
291bp
 vacuolar_protein_sorting-associated_protein_13D_[Bombyx_mori]
GO:0005622 C intracellular anatomical structure
GO:0006623 P protein targeting to vacuole
GO:0019898 C extrinsic component of membrane
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
5535 O_BomoASG14983_5prime_partial:A_BomoASG_c28877_g1_i1
210bp
5536 O_BomoASG14984_5prime_partial:A_BomoASG_c28877_g1_i2
102bp
5537 O_BomoASG14985_5prime_partial:A_BomoASG_c28877_g1_i2
100bp
5538 O_BomoASG14986_internal:A_BomoASG_c28877_g1_i3
331bp
 vacuolar_protein_sorting-associated_protein_13D_[Bombyx_mori]
GO:0005622 C intracellular anatomical structure
GO:0006623 P protein targeting to vacuole
GO:0019898 C extrinsic component of membrane
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
5539 O_BomoASG14987_5prime_partial:A_BomoASG_c28877_g1_i3
210bp
5540 O_BomoASG14988_3prime_partial:A_BomoASG_c28877_g1_i3
117bp
5541 O_BomoASG14989_complete:A_BomoASG_c28879_g2_i1
625bp
 polypeptide_N-acetylgalactosaminyltransferase_5_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0004653 F polypeptide N-acetylgalactosaminyltransferase activity
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0006486 P protein glycosylation
GO:0009312 P oligosaccharide biosynthetic process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030246 F carbohydrate binding
GO:0046872 F metal ion binding
5542 O_BomoASG1498_5prime_partial:A_BomoASG_c9361_g1_i1
103bp
 uncharacterized_protein_LOC101745021_isoform_X6_[Bombyx_mori]
5543 O_BomoASG14990_complete:A_BomoASG_c28879_g2_i2
625bp
 polypeptide_N-acetylgalactosaminyltransferase_5_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0004653 F polypeptide N-acetylgalactosaminyltransferase activity
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0006486 P protein glycosylation
GO:0009312 P oligosaccharide biosynthetic process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030246 F carbohydrate binding
GO:0046872 F metal ion binding
5544 O_BomoASG14991_complete:A_BomoASG_c28879_g2_i4
625bp
 polypeptide_N-acetylgalactosaminyltransferase_5_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0004653 F polypeptide N-acetylgalactosaminyltransferase activity
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0006486 P protein glycosylation
GO:0009312 P oligosaccharide biosynthetic process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030246 F carbohydrate binding
GO:0046872 F metal ion binding
5545 O_BomoASG14992_complete:A_BomoASG_c28881_g2_i1
120bp
 elongin-B_isoform_X1_[Bombyx_mori]
GO:0003713 F transcription coactivator activity
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0016567 P protein ubiquitination
GO:0030891 C VCB complex
GO:0032403 F protein-containing complex binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0070449 C elongin complex
5546 O_BomoASG14993_complete:A_BomoASG_c28882_g1_i2
857bp
 E3_ubiquitin-protein_ligase_Su(dx)_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005112 F Notch binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005938 C cell cortex
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0016348 P imaginal disc-derived leg joint morphogenesis
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0019904 F protein domain specific binding
GO:0019915 P lipid storage
GO:0031623 P receptor internalization
GO:0032880 P regulation of protein localization
GO:0035209 P pupal development
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0045746 P negative regulation of Notch signaling pathway
GO:0048190 P wing disc dorsal/ventral pattern formation
5547 O_BomoASG14994_complete:A_BomoASG_c28882_g1_i3
857bp
 E3_ubiquitin-protein_ligase_Su(dx)_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005112 F Notch binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005938 C cell cortex
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0016348 P imaginal disc-derived leg joint morphogenesis
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0019904 F protein domain specific binding
GO:0019915 P lipid storage
GO:0031623 P receptor internalization
GO:0032880 P regulation of protein localization
GO:0035209 P pupal development
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0045746 P negative regulation of Notch signaling pathway
GO:0048190 P wing disc dorsal/ventral pattern formation
5548 O_BomoASG14995_complete:A_BomoASG_c28886_g1_i2
171bp
 D-tyrosyl-tRNA(Tyr)_deacylase_1_[Bombyx_mori]
GO:0002161 F aminoacyl-tRNA editing activity
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006260 P DNA replication
GO:0006399 P tRNA metabolic process
GO:0006450 P regulation of translational fidelity
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0019478 P D-amino acid catabolic process
GO:0046872 F metal ion binding
GO:0051500 F D-tyrosyl-tRNA(Tyr) deacylase activity
5549 O_BomoASG14996_complete:A_BomoASG_c28886_g1_i3
105bp
 D-tyrosyl-tRNA(Tyr)_deacylase_1_[Bombyx_mori]
GO:0002161 F aminoacyl-tRNA editing activity
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006260 P DNA replication
GO:0006399 P tRNA metabolic process
GO:0006450 P regulation of translational fidelity
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0019478 P D-amino acid catabolic process
GO:0046872 F metal ion binding
GO:0051500 F D-tyrosyl-tRNA(Tyr) deacylase activity
5550 O_BomoASG14997_complete:A_BomoASG_c28887_g1_i1
108bp
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