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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4591 O_BomoASG14132_5prime_partial:A_BomoASG_c28518_g1_i2
118bp
4592 O_BomoASG14133_5prime_partial:A_BomoASG_c28518_g1_i2
107bp
 PREDICTED:_branchpoint-bridging_protein_[Plutella_xylostella]
GO:0000245 P spliceosomal complex assembly
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005840 C ribosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0030238 P male sex determination
GO:0033327 P Leydig cell differentiation
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0050810 P regulation of steroid biosynthetic process
GO:1903507 P negative regulation of nucleic acid-templated transcription
4593 O_BomoASG14134_5prime_partial:A_BomoASG_c28518_g1_i2
106bp
 hypothetical_protein_T10_11150,_partial_[Trichinella_papuae]
4594 O_BomoASG14135_3prime_partial:A_BomoASG_c28518_g1_i3
304bp
 splicing_factor_1_[Bombyx_mori]
GO:0000245 P spliceosomal complex assembly
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005840 C ribosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0030238 P male sex determination
GO:0033327 P Leydig cell differentiation
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0050810 P regulation of steroid biosynthetic process
GO:1903507 P negative regulation of nucleic acid-templated transcription
4595 O_BomoASG14136_5prime_partial:A_BomoASG_c28518_g1_i3
262bp
4596 O_BomoASG14137_5prime_partial:A_BomoASG_c28518_g1_i3
106bp
 hypothetical_protein_T10_11150,_partial_[Trichinella_papuae]
4597 O_BomoASG14138_internal:A_BomoASG_c28518_g1_i4
379bp
 splicing_factor_1_[Bombyx_mori]
GO:0000245 P spliceosomal complex assembly
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005840 C ribosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0030238 P male sex determination
GO:0033327 P Leydig cell differentiation
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0050810 P regulation of steroid biosynthetic process
GO:1903507 P negative regulation of nucleic acid-templated transcription
4598 O_BomoASG14139_5prime_partial:A_BomoASG_c28518_g1_i4
262bp
4599 O_BomoASG1413_internal:A_BomoASG_c8724_g1_i1
100bp
 regulator_of_G-protein_signaling_loco_[Bombyx_mori]
4600 O_BomoASG14140_5prime_partial:A_BomoASG_c28518_g1_i4
132bp
4601 O_BomoASG14141_3prime_partial:A_BomoASG_c28518_g1_i4
123bp
4602 O_BomoASG14142_5prime_partial:A_BomoASG_c28518_g1_i4
106bp
 hypothetical_protein_T10_11150,_partial_[Trichinella_papuae]
4603 O_BomoASG14143_5prime_partial:A_BomoASG_c28518_g1_i6
262bp
4604 O_BomoASG14144_3prime_partial:A_BomoASG_c28518_g1_i6
226bp
 splicing_factor_1_[Bombyx_mori]
GO:0000245 P spliceosomal complex assembly
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005840 C ribosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0030238 P male sex determination
GO:0033327 P Leydig cell differentiation
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0050810 P regulation of steroid biosynthetic process
GO:1903507 P negative regulation of nucleic acid-templated transcription
4605 O_BomoASG14145_5prime_partial:A_BomoASG_c28518_g1_i6
106bp
 hypothetical_protein_T10_11150,_partial_[Trichinella_papuae]
4606 O_BomoASG14146_5prime_partial:A_BomoASG_c28518_g1_i7
262bp
4607 O_BomoASG14147_3prime_partial:A_BomoASG_c28518_g1_i7
226bp
 splicing_factor_1_[Bombyx_mori]
GO:0000245 P spliceosomal complex assembly
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005840 C ribosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0030238 P male sex determination
GO:0033327 P Leydig cell differentiation
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0050810 P regulation of steroid biosynthetic process
GO:1903507 P negative regulation of nucleic acid-templated transcription
4608 O_BomoASG14148_5prime_partial:A_BomoASG_c28518_g1_i7
106bp
 hypothetical_protein_T10_11150,_partial_[Trichinella_papuae]
4609 O_BomoASG14149_complete:A_BomoASG_c28519_g1_i1
768bp
 protein_zer-1_homolog_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0016567 P protein ubiquitination
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0051438 P regulation of ubiquitin-protein transferase activity
4610 O_BomoASG1414_internal:A_BomoASG_c8724_g1_i1
100bp
4611 O_BomoASG14150_complete:A_BomoASG_c28519_g1_i1
129bp
4612 O_BomoASG14151_complete:A_BomoASG_c28519_g1_i1
126bp
4613 O_BomoASG14152_complete:A_BomoASG_c28519_g1_i2
629bp
 protein_zer-1_homolog_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0016567 P protein ubiquitination
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0051438 P regulation of ubiquitin-protein transferase activity
4614 O_BomoASG14153_complete:A_BomoASG_c28519_g1_i2
126bp
4615 O_BomoASG14154_5prime_partial:A_BomoASG_c28519_g1_i3
631bp
 protein_zer-1_homolog_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0016567 P protein ubiquitination
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0051438 P regulation of ubiquitin-protein transferase activity
4616 O_BomoASG14155_complete:A_BomoASG_c28519_g1_i3
129bp
4617 O_BomoASG14156_complete:A_BomoASG_c28519_g1_i3
126bp
4618 O_BomoASG14157_internal:A_BomoASG_c28522_g1_i1
242bp
 rab5_GDP/GTP_exchange_factor_[Bombyx_mori]
GO:0001933 P negative regulation of protein phosphorylation
GO:0002686 P negative regulation of leukocyte migration
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006612 P protein targeting to membrane
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0008270 F zinc ion binding
GO:0015031 P protein transport
GO:0016567 P protein ubiquitination
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0017137 F small GTPase binding
GO:0031982 C vesicle
GO:0033004 P negative regulation of mast cell activation
GO:0043305 P negative regulation of mast cell degranulation
GO:0043547 P positive regulation of GTPase activity
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046872 F metal ion binding
GO:0048261 P negative regulation of receptor-mediated endocytosis
GO:0050728 P negative regulation of inflammatory response
GO:0055037 C recycling endosome
GO:0060368 P regulation of Fc receptor mediated stimulatory signaling pathway
GO:0061630 F ubiquitin protein ligase activity
GO:1900165 P negative regulation of interleukin-6 production
GO:1900235 P negative regulation of Kit signaling pathway
4619 O_BomoASG14158_3prime_partial:A_BomoASG_c28522_g1_i2
280bp
 rab5_GDP/GTP_exchange_factor_[Bombyx_mori]
GO:0001933 P negative regulation of protein phosphorylation
GO:0002686 P negative regulation of leukocyte migration
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006612 P protein targeting to membrane
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0008270 F zinc ion binding
GO:0015031 P protein transport
GO:0016567 P protein ubiquitination
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0017137 F small GTPase binding
GO:0031982 C vesicle
GO:0033004 P negative regulation of mast cell activation
GO:0043305 P negative regulation of mast cell degranulation
GO:0043547 P positive regulation of GTPase activity
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046872 F metal ion binding
GO:0048261 P negative regulation of receptor-mediated endocytosis
GO:0050728 P negative regulation of inflammatory response
GO:0055037 C recycling endosome
GO:0060368 P regulation of Fc receptor mediated stimulatory signaling pathway
GO:0061630 F ubiquitin protein ligase activity
GO:1900165 P negative regulation of interleukin-6 production
GO:1900235 P negative regulation of Kit signaling pathway
4620 O_BomoASG14159_5prime_partial:A_BomoASG_c28524_g1_i1
135bp
 Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94,_partial_[Glycine_soja]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
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