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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4561 O_BomoASG14105_5prime_partial:A_BomoASG_c28506_g1_i1
143bp
4562 O_BomoASG14106_3prime_partial:A_BomoASG_c28506_g1_i2
488bp
 type_I_inositol_3,4-bisphosphate_4-phosphatase_isoform_X2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0008152 P metabolic process
GO:0016311 P dephosphorylation
GO:0016316 F phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity
GO:0016787 F hydrolase activity
GO:0034597 F phosphatidylinositol-4,5-bisphosphate 4-phosphatase activity
GO:0036092 P phosphatidylinositol-3-phosphate biosynthetic process
4563 O_BomoASG14107_5prime_partial:A_BomoASG_c28506_g1_i2
143bp
4564 O_BomoASG14108_5prime_partial:A_BomoASG_c28508_g1_i1
323bp
 serine/threonine-protein_kinase_Warts_[Bombyx_mori]
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0000819 P sister chromatid segregation
GO:0000922 C spindle pole
GO:0001827 P inner cell mass cell fate commitment
GO:0001828 P inner cell mass cellular morphogenesis
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0009755 P hormone-mediated signaling pathway
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0019901 F protein kinase binding
GO:0030216 P keratinocyte differentiation
GO:0030833 P regulation of actin filament polymerization
GO:0033138 P positive regulation of peptidyl-serine phosphorylation
GO:0034613 P cellular protein localization
GO:0035329 P hippo signaling
GO:0043065 P positive regulation of apoptotic process
GO:0043254 P regulation of protein-containing complex assembly
GO:0045736 P negative regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0046620 P regulation of organ growth
GO:0046872 F metal ion binding
GO:0051220 P cytoplasmic sequestering of protein
GO:0051301 P cell division
GO:0090090 P negative regulation of canonical Wnt signaling pathway
4565 O_BomoASG14109_5prime_partial:A_BomoASG_c28508_g1_i2
438bp
 serine/threonine-protein_kinase_Warts_[Bombyx_mori]
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0000819 P sister chromatid segregation
GO:0000922 C spindle pole
GO:0001827 P inner cell mass cell fate commitment
GO:0001828 P inner cell mass cellular morphogenesis
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0009755 P hormone-mediated signaling pathway
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0019901 F protein kinase binding
GO:0030216 P keratinocyte differentiation
GO:0030833 P regulation of actin filament polymerization
GO:0033138 P positive regulation of peptidyl-serine phosphorylation
GO:0034613 P cellular protein localization
GO:0035329 P hippo signaling
GO:0043065 P positive regulation of apoptotic process
GO:0043254 P regulation of protein-containing complex assembly
GO:0045736 P negative regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0046620 P regulation of organ growth
GO:0046872 F metal ion binding
GO:0051220 P cytoplasmic sequestering of protein
GO:0051301 P cell division
GO:0090090 P negative regulation of canonical Wnt signaling pathway
4566 O_BomoASG1410_complete:A_BomoASG_c8719_g1_i1
263bp
 elongation_factor_1_delta_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003746 F translation elongation factor activity
GO:0004871 F obsolete signal transducer activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005853 C eukaryotic translation elongation factor 1 complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0007165 P signal transduction
GO:0009299 P mRNA transcription
GO:0010941 P regulation of cell death
GO:0031072 F heat shock protein binding
GO:0033613 F DNA-binding transcription factor binding
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0071479 P cellular response to ionizing radiation
4567 O_BomoASG14110_complete:A_BomoASG_c28508_g1_i3
1026bp
 serine/threonine-protein_kinase_Warts_[Bombyx_mori]
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0000819 P sister chromatid segregation
GO:0000922 C spindle pole
GO:0001827 P inner cell mass cell fate commitment
GO:0001828 P inner cell mass cellular morphogenesis
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0009755 P hormone-mediated signaling pathway
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019901 F protein kinase binding
GO:0030216 P keratinocyte differentiation
GO:0030833 P regulation of actin filament polymerization
GO:0033138 P positive regulation of peptidyl-serine phosphorylation
GO:0034613 P cellular protein localization
GO:0035329 P hippo signaling
GO:0043065 P positive regulation of apoptotic process
GO:0043254 P regulation of protein-containing complex assembly
GO:0045736 P negative regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0046620 P regulation of organ growth
GO:0046872 F metal ion binding
GO:0051220 P cytoplasmic sequestering of protein
GO:0051301 P cell division
GO:0090090 P negative regulation of canonical Wnt signaling pathway
4568 O_BomoASG14111_complete:A_BomoASG_c28508_g1_i3
264bp
4569 O_BomoASG14112_complete:A_BomoASG_c28508_g1_i3
103bp
4570 O_BomoASG14113_internal:A_BomoASG_c28510_g1_i1
380bp
 rotatin_isoform_X2_[Bombyx_mori]
4571 O_BomoASG14114_5prime_partial:A_BomoASG_c28510_g1_i1
281bp
4572 O_BomoASG14115_internal:A_BomoASG_c28510_g2_i1
138bp
 rotatin_isoform_X2_[Bombyx_mori]
4573 O_BomoASG14116_internal:A_BomoASG_c28510_g1_i2
198bp
 rotatin_isoform_X2_[Bombyx_mori]
4574 O_BomoASG14117_internal:A_BomoASG_c28510_g1_i2
197bp
4575 O_BomoASG14118_internal:A_BomoASG_c28510_g1_i3
406bp
 rotatin_isoform_X3_[Bombyx_mori]
4576 O_BomoASG14119_5prime_partial:A_BomoASG_c28510_g1_i3
281bp
4577 O_BomoASG1411_complete:A_BomoASG_c8719_g1_i2
234bp
 elongation_factor_1_delta_isoform_X1_[Bombyx_mori]
GO:0003746 F translation elongation factor activity
GO:0005853 C eukaryotic translation elongation factor 1 complex
GO:0006412 P translation
GO:0006414 P translational elongation
4578 O_BomoASG14120_5prime_partial:A_BomoASG_c28512_g1_i2
298bp
4579 O_BomoASG14121_3prime_partial:A_BomoASG_c28512_g1_i2
258bp
4580 O_BomoASG14122_5prime_partial:A_BomoASG_c28512_g1_i2
254bp
 LOW_QUALITY_PROTEIN:_liprin-alpha-1_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005925 C focal adhesion
GO:0007160 P cell-matrix adhesion
GO:0007165 P signal transduction
GO:0007269 P neurotransmitter secretion
GO:0014047 P glutamate secretion
GO:0048786 C presynaptic active zone
GO:0051497 P negative regulation of stress fiber assembly
GO:0090005 P negative regulation of protein localization to plasma membrane
4581 O_BomoASG14123_complete:A_BomoASG_c28513_g1_i1
116bp
4582 O_BomoASG14124_3prime_partial:A_BomoASG_c28514_g1_i2
377bp
 zinc_finger_protein_91-like_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
4583 O_BomoASG14125_complete:A_BomoASG_c28516_g1_i1
224bp
 uncharacterized_protein_LOC101743712_[Bombyx_mori]
4584 O_BomoASG14126_5prime_partial:A_BomoASG_c28517_g1_i1
217bp
 uncharacterized_protein_LOC101743157_isoform_X1_[Bombyx_mori]
4585 O_BomoASG14127_5prime_partial:A_BomoASG_c28518_g1_i1
122bp
4586 O_BomoASG14128_5prime_partial:A_BomoASG_c28518_g1_i1
120bp
 splicing_factor_1_[Bombyx_mori]
GO:0000245 P spliceosomal complex assembly
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005840 C ribosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0030238 P male sex determination
GO:0033327 P Leydig cell differentiation
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0050810 P regulation of steroid biosynthetic process
GO:1903507 P negative regulation of nucleic acid-templated transcription
4587 O_BomoASG14129_3prime_partial:A_BomoASG_c28518_g1_i1
109bp
4588 O_BomoASG1412_internal:A_BomoASG_c8720_g1_i1
117bp
 putative_inorganic_phosphate_cotransporter_[Bombyx_mori]
GO:0005351 F carbohydrate:proton symporter activity
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006820 P anion transport
GO:0006865 P amino acid transport
GO:0015136 F sialic acid transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015538 F sialic acid:proton symporter activity
GO:0015739 P sialic acid transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
GO:0055085 P transmembrane transport
GO:1905039 P carboxylic acid transmembrane transport
4589 O_BomoASG14130_5prime_partial:A_BomoASG_c28518_g1_i2
262bp
4590 O_BomoASG14131_3prime_partial:A_BomoASG_c28518_g1_i2
226bp
 splicing_factor_1_[Bombyx_mori]
GO:0000245 P spliceosomal complex assembly
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005840 C ribosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0030238 P male sex determination
GO:0033327 P Leydig cell differentiation
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0050810 P regulation of steroid biosynthetic process
GO:1903507 P negative regulation of nucleic acid-templated transcription
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