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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4381 O_BomoASG13944_complete:A_BomoASG_c28441_g1_i3
188bp
4382 O_BomoASG13945_complete:A_BomoASG_c28442_g1_i1
247bp
 PREDICTED:_LIM_and_SH3_domain_protein_Lasp_isoform_X4_[Papilio_polytes]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0005925 C focal adhesion
GO:0007279 P pole cell formation
GO:0007283 P spermatogenesis
GO:0007291 P sperm individualization
GO:0008270 F zinc ion binding
GO:0014881 P regulation of myofibril size
GO:0015629 C actin cytoskeleton
GO:0030018 C Z disc
GO:0031672 C A band
GO:0045214 P sarcomere organization
GO:0045856 P positive regulation of pole plasm oskar mRNA localization
GO:0046872 F metal ion binding
GO:0070864 C sperm individualization complex
GO:0071689 P muscle thin filament assembly
4383 O_BomoASG13946_complete:A_BomoASG_c28442_g1_i2
455bp
 LIM_and_SH3_domain_protein_Lasp_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0005925 C focal adhesion
GO:0007279 P pole cell formation
GO:0007283 P spermatogenesis
GO:0007291 P sperm individualization
GO:0008270 F zinc ion binding
GO:0014881 P regulation of myofibril size
GO:0015629 C actin cytoskeleton
GO:0030018 C Z disc
GO:0031672 C A band
GO:0045214 P sarcomere organization
GO:0045856 P positive regulation of pole plasm oskar mRNA localization
GO:0046872 F metal ion binding
GO:0070864 C sperm individualization complex
GO:0071689 P muscle thin filament assembly
4384 O_BomoASG13947_complete:A_BomoASG_c28442_g1_i2
107bp
4385 O_BomoASG13948_5prime_partial:A_BomoASG_c28443_g1_i1
103bp
 carboxy-terminal_domain_RNA_polymerase_II_polypeptide_A_small_phosphatase_1_[Bombyx_mori]
GO:0001933 P negative regulation of protein phosphorylation
GO:0004721 F phosphoprotein phosphatase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006470 P protein dephosphorylation
GO:0008420 F RNA polymerase II CTD heptapeptide repeat phosphatase activity
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0045665 P negative regulation of neuron differentiation
GO:0046872 F metal ion binding
GO:0050768 P negative regulation of neurogenesis
GO:0070062 C extracellular exosome
GO:2000134 P negative regulation of G1/S transition of mitotic cell cycle
4386 O_BomoASG13949_3prime_partial:A_BomoASG_c28443_g3_i1
191bp
 carboxy-terminal_domain_RNA_polymerase_II_polypeptide_A_small_phosphatase_1_[Bombyx_mori]
GO:0001933 P negative regulation of protein phosphorylation
GO:0004721 F phosphoprotein phosphatase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006470 P protein dephosphorylation
GO:0008420 F RNA polymerase II CTD heptapeptide repeat phosphatase activity
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0045665 P negative regulation of neuron differentiation
GO:0046872 F metal ion binding
GO:0050768 P negative regulation of neurogenesis
GO:0070062 C extracellular exosome
GO:2000134 P negative regulation of G1/S transition of mitotic cell cycle
4387 O_BomoASG1394_3prime_partial:A_BomoASG_c8565_g1_i1
199bp
 monocarboxylate_transporter_14_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0008028 F monocarboxylic acid transmembrane transporter activity
GO:0015129 F lactate transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015718 P monocarboxylic acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035873 P lactate transmembrane transport
GO:0035879 P plasma membrane lactate transport
GO:0050833 F pyruvate transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:1901475 P pyruvate transmembrane transport
4388 O_BomoASG13950_5prime_partial:A_BomoASG_c28444_g1_i1
314bp
 UNC93-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005886 C plasma membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
4389 O_BomoASG13951_complete:A_BomoASG_c28444_g1_i2
285bp
 UNC93-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005886 C plasma membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
4390 O_BomoASG13952_5prime_partial:A_BomoASG_c28444_g1_i2
164bp
 UNC93-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005886 C plasma membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
4391 O_BomoASG13953_5prime_partial:A_BomoASG_c28444_g1_i3
109bp
 UNC93-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005886 C plasma membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
4392 O_BomoASG13954_5prime_partial:A_BomoASG_c28444_g1_i5
396bp
 UNC93-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005886 C plasma membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
4393 O_BomoASG13955_5prime_partial:A_BomoASG_c28444_g1_i6
400bp
 UNC93-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005886 C plasma membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
4394 O_BomoASG13956_complete:A_BomoASG_c28444_g1_i7
256bp
 UNC93-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005886 C plasma membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
4395 O_BomoASG13957_complete:A_BomoASG_c28444_g1_i7
195bp
 PREDICTED:_UNC93-like_protein_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005886 C plasma membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
4396 O_BomoASG13958_complete:A_BomoASG_c28444_g1_i8
256bp
 UNC93-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005886 C plasma membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
4397 O_BomoASG13959_complete:A_BomoASG_c28444_g1_i8
195bp
 PREDICTED:_UNC93-like_protein_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005886 C plasma membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
4398 O_BomoASG1395_internal:A_BomoASG_c8608_g1_i1
158bp
 reverse_transcriptase,_partial_[Operophtera_brumata]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004533 F exoribonuclease H activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016032 P viral process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0019028 C viral capsid
GO:0019076 P viral release from host cell
GO:0039660 F structural constituent of virion
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0075713 P establishment of integrated proviral latency
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
4399 O_BomoASG13960_complete:A_BomoASG_c28444_g1_i9
256bp
 UNC93-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005886 C plasma membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
4400 O_BomoASG13961_5prime_partial:A_BomoASG_c28444_g1_i9
165bp
 PREDICTED:_UNC93-like_protein_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005886 C plasma membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
4401 O_BomoASG13962_5prime_partial:A_BomoASG_c28448_g1_i1
479bp
 LOW_QUALITY_PROTEIN:_CAD_protein_[Bombyx_mori]
GO:0000050 P urea cycle
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004070 F aspartate carbamoyltransferase activity
GO:0004087 F carbamoyl-phosphate synthase (ammonia) activity
GO:0004088 F carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
GO:0004151 F dihydroorotase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006207 P 'de novo' pyrimidine nucleobase biosynthetic process
GO:0006221 P pyrimidine nucleotide biosynthetic process
GO:0006520 P cellular amino acid metabolic process
GO:0006526 P arginine biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0006807 P nitrogen compound metabolic process
GO:0008152 P metabolic process
GO:0016597 F amino acid binding
GO:0016740 F transferase activity
GO:0016743 F carboxyl- or carbamoyltransferase activity
GO:0016787 F hydrolase activity
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0016812 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
GO:0016874 F ligase activity
GO:0044205 P 'de novo' UMP biosynthetic process
GO:0046872 F metal ion binding
GO:0070406 F glutamine binding
4402 O_BomoASG13963_5prime_partial:A_BomoASG_c28448_g1_i2
1058bp
 LOW_QUALITY_PROTEIN:_CAD_protein_[Bombyx_mori]
GO:0000050 P urea cycle
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004070 F aspartate carbamoyltransferase activity
GO:0004087 F carbamoyl-phosphate synthase (ammonia) activity
GO:0004088 F carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
GO:0004151 F dihydroorotase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006207 P 'de novo' pyrimidine nucleobase biosynthetic process
GO:0006221 P pyrimidine nucleotide biosynthetic process
GO:0006520 P cellular amino acid metabolic process
GO:0006526 P arginine biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0006807 P nitrogen compound metabolic process
GO:0008152 P metabolic process
GO:0016597 F amino acid binding
GO:0016740 F transferase activity
GO:0016743 F carboxyl- or carbamoyltransferase activity
GO:0016787 F hydrolase activity
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0016812 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
GO:0016874 F ligase activity
GO:0044205 P 'de novo' UMP biosynthetic process
GO:0046872 F metal ion binding
GO:0070406 F glutamine binding
4403 O_BomoASG13964_internal:A_BomoASG_c28450_g1_i1
207bp
 xanthine_dehydrogenase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004854 F xanthine dehydrogenase activity
GO:0004855 F xanthine oxidase activity
GO:0005506 F iron ion binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005777 C peroxisome
GO:0005829 C cytosol
GO:0009055 F electron transfer activity
GO:0009115 P xanthine catabolic process
GO:0010044 P response to aluminum ion
GO:0016491 F oxidoreductase activity
GO:0016614 F oxidoreductase activity, acting on CH-OH group of donors
GO:0016903 F oxidoreductase activity, acting on the aldehyde or oxo group of donors
GO:0043546 F molybdopterin cofactor binding
GO:0045453 P bone resorption
GO:0046872 F metal ion binding
GO:0050660 F flavin adenine dinucleotide binding
GO:0051536 F iron-sulfur cluster binding
GO:0051537 F 2 iron, 2 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
4404 O_BomoASG13965_3prime_partial:A_BomoASG_c28450_g1_i2
1256bp
 xanthine_dehydrogenase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004031 F aldehyde oxidase activity
GO:0004854 F xanthine dehydrogenase activity
GO:0005506 F iron ion binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0009055 F electron transfer activity
GO:0009115 P xanthine catabolic process
GO:0009688 P abscisic acid biosynthetic process
GO:0009851 P auxin biosynthetic process
GO:0016491 F oxidoreductase activity
GO:0016614 F oxidoreductase activity, acting on CH-OH group of donors
GO:0046872 F metal ion binding
GO:0050302 F indole-3-acetaldehyde oxidase activity
GO:0050660 F flavin adenine dinucleotide binding
GO:0051536 F iron-sulfur cluster binding
GO:0051537 F 2 iron, 2 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
4405 O_BomoASG13966_complete:A_BomoASG_c28450_g1_i2
201bp
4406 O_BomoASG13967_complete:A_BomoASG_c28450_g1_i2
176bp
4407 O_BomoASG13968_complete:A_BomoASG_c28450_g1_i2
121bp
4408 O_BomoASG13969_complete:A_BomoASG_c28450_g1_i2
120bp
4409 O_BomoASG1396_internal:A_BomoASG_c8610_g1_i1
146bp
 vacuolar_protein_sorting-associated_protein_13D_[Bombyx_mori]
GO:0005622 C intracellular anatomical structure
GO:0006623 P protein targeting to vacuole
GO:0019898 C extrinsic component of membrane
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
4410 O_BomoASG13970_complete:A_BomoASG_c28451_g1_i1
130bp
 uncharacterized_protein_LOC101740630_[Bombyx_mori]
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