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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4231 O_BomoASG13809_internal:A_BomoASG_c28391_g2_i2
272bp
 exostosin-3_isoform_X1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0001888 F glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0006044 P N-acetylglucosamine metabolic process
GO:0007224 P smoothened signaling pathway
GO:0007275 P multicellular organism development
GO:0007367 P segment polarity determination
GO:0008101 P BMP signaling pathway
GO:0008375 F acetylglucosaminyltransferase activity
GO:0015012 P heparan sulfate proteoglycan biosynthetic process
GO:0015014 P heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030201 P heparan sulfate proteoglycan metabolic process
GO:0030210 P heparin biosynthetic process
GO:0042328 F heparan sulfate N-acetylglucosaminyltransferase activity
GO:0046872 F metal ion binding
4232 O_BomoASG1380_internal:A_BomoASG_c8456_g1_i1
326bp
 aldo-keto_reductase_AKR2E4_isoform_X1_[Bombyx_mori]
GO:0006629 P lipid metabolic process
GO:0008202 P steroid metabolic process
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
4233 O_BomoASG13810_internal:A_BomoASG_c28391_g2_i3
426bp
 exostosin-3_isoform_X1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0001888 F glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0006044 P N-acetylglucosamine metabolic process
GO:0007224 P smoothened signaling pathway
GO:0007275 P multicellular organism development
GO:0007367 P segment polarity determination
GO:0008101 P BMP signaling pathway
GO:0008375 F acetylglucosaminyltransferase activity
GO:0015012 P heparan sulfate proteoglycan biosynthetic process
GO:0015014 P heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030201 P heparan sulfate proteoglycan metabolic process
GO:0030210 P heparin biosynthetic process
GO:0042328 F heparan sulfate N-acetylglucosaminyltransferase activity
GO:0046872 F metal ion binding
4234 O_BomoASG13811_3prime_partial:A_BomoASG_c28392_g1_i1
298bp
 cytochrome_b5-related_protein_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005811 C lipid droplet
GO:0006629 P lipid metabolic process
GO:0009055 F electron transfer activity
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
4235 O_BomoASG13812_3prime_partial:A_BomoASG_c28393_g1_i2
171bp
 serine/threonine-protein_kinase_D2-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004697 F protein kinase C activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0007205 P protein kinase C-activating G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
4236 O_BomoASG13813_complete:A_BomoASG_c28394_g1_i1
294bp
 origin_recognition_complex_subunit_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005664 C nuclear origin of replication recognition complex
GO:0006260 P DNA replication
4237 O_BomoASG13814_internal:A_BomoASG_c28394_g1_i2
188bp
 origin_recognition_complex_subunit_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005664 C nuclear origin of replication recognition complex
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0006270 P DNA replication initiation
GO:0006277 P DNA amplification
GO:0006342 P heterochromatin assembly
GO:0008283 P cell population proliferation
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0042023 P DNA endoreduplication
4238 O_BomoASG13815_5prime_partial:A_BomoASG_c28395_g1_i2
104bp
 zinc_finger_protein_660_isoform_X1_[Bombyx_mori]
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
4239 O_BomoASG13816_5prime_partial:A_BomoASG_c28395_g1_i3
571bp
 zinc_finger_protein_660_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
4240 O_BomoASG13817_internal:A_BomoASG_c28397_g1_i1
577bp
 erythroid_differentiation-related_factor_1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
4241 O_BomoASG13818_complete:A_BomoASG_c28397_g1_i1
153bp
4242 O_BomoASG13819_5prime_partial:A_BomoASG_c28397_g1_i1
113bp
4243 O_BomoASG1381_complete:A_BomoASG_c8462_g1_i1
118bp
 MICOS_complex_subunit_MIC13_homolog_QIL1_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022008 P neurogenesis
GO:0042407 P cristae formation
GO:1903850 P regulation of cristae formation
4244 O_BomoASG13820_internal:A_BomoASG_c28397_g1_i2
457bp
 erythroid_differentiation-related_factor_1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
4245 O_BomoASG13821_5prime_partial:A_BomoASG_c28397_g1_i2
113bp
4246 O_BomoASG13822_3prime_partial:A_BomoASG_c28398_g1_i1
335bp
 uncharacterized_protein_LOC101746773,_partial_[Bombyx_mori]
4247 O_BomoASG13823_5prime_partial:A_BomoASG_c28398_g1_i1
113bp
4248 O_BomoASG13824_5prime_partial:A_BomoASG_c28398_g1_i1
104bp
4249 O_BomoASG13825_complete:A_BomoASG_c28398_g1_i2
221bp
 uncharacterized_protein_LOC101746773,_partial_[Bombyx_mori]
4250 O_BomoASG13826_internal:A_BomoASG_c28398_g1_i3
121bp
 hypothetical_protein_KGM_201851_[Danaus_plexippus_plexippus]
4251 O_BomoASG13827_5prime_partial:A_BomoASG_c28398_g1_i3
113bp
4252 O_BomoASG13828_5prime_partial:A_BomoASG_c28398_g1_i3
104bp
4253 O_BomoASG13829_5prime_partial:A_BomoASG_c28399_g1_i1
144bp
 DNA_polymerase_epsilon_subunit_4_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005634 C nucleus
GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0008622 C epsilon DNA polymerase complex
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0043966 P histone H3 acetylation
GO:0046982 F protein heterodimerization activity
GO:0071897 P DNA biosynthetic process
4254 O_BomoASG1382_internal:A_BomoASG_c8501_g1_i1
169bp
 LOW_QUALITY_PROTEIN:_fat-like_cadherin-related_tumor_suppressor_homolog,_partial_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007293 P germarium-derived egg chamber formation
GO:0007295 P growth of a germarium-derived egg chamber
GO:0007424 P open tracheal system development
GO:0007431 P salivary gland development
GO:0007440 P foregut morphogenesis
GO:0007442 P hindgut morphogenesis
GO:0009925 C basal plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0030950 P establishment or maintenance of actin cytoskeleton polarity
GO:0042247 P establishment of planar polarity of follicular epithelium
GO:0044331 P cell-cell adhesion mediated by cadherin
GO:0045089 P positive regulation of innate immune response
GO:0045571 P negative regulation of imaginal disc growth
GO:0048477 P oogenesis
GO:0050829 P defense response to Gram-negative bacterium
GO:0050839 F cell adhesion molecule binding
GO:0060429 P epithelium development
4255 O_BomoASG13830_complete:A_BomoASG_c28399_g1_i2
146bp
 DNA_polymerase_epsilon_subunit_4_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005634 C nucleus
GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0008622 C epsilon DNA polymerase complex
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0043966 P histone H3 acetylation
GO:0046982 F protein heterodimerization activity
GO:0071897 P DNA biosynthetic process
4256 O_BomoASG13831_complete:A_BomoASG_c28400_g2_i1
134bp
 uncharacterized_protein_LOC101739933_isoform_X1_[Bombyx_mori]
4257 O_BomoASG13832_3prime_partial:A_BomoASG_c28402_g2_i1
329bp
 poly(U)-binding-splicing_factor_half_pint_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000380 P alternative mRNA splicing, via spliceosome
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0001558 P regulation of cell growth
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0007282 P cystoblast division
GO:0008266 F poly(U) RNA binding
GO:0008380 P RNA splicing
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0043234 C protein-containing complex
GO:0048477 P oogenesis
GO:0051726 P regulation of cell cycle
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
4258 O_BomoASG13833_complete:A_BomoASG_c28402_g2_i1
164bp
 hypothetical_protein_ALC60_10959_[Trachymyrmex_zeteki]
4259 O_BomoASG13834_5prime_partial:A_BomoASG_c28402_g2_i1
152bp
4260 O_BomoASG13835_internal:A_BomoASG_c28402_g2_i2
160bp
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