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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4201 O_BomoASG13782_internal:A_BomoASG_c28373_g1_i1
204bp
 PREDICTED:_uncharacterized_protein_LOC106123780_[Papilio_xuthus]
4202 O_BomoASG13783_5prime_partial:A_BomoASG_c28374_g1_i1
289bp
 androgen-dependent_TFPI-regulating_protein_isoform_X2_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
4203 O_BomoASG13784_3prime_partial:A_BomoASG_c28375_g1_i1
191bp
 E3_SUMO-protein_ligase_RanBP2_[Bombyx_mori]
GO:0000042 P protein localization to Golgi apparatus
GO:0005643 C nuclear pore
GO:0008150 P biological_process
GO:0008536 F small GTPase binding
GO:0046907 P intracellular transport
4204 O_BomoASG13785_5prime_partial:A_BomoASG_c28376_g1_i1
131bp
 vacuolar_protein_sorting-associated_protein_45_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006904 P vesicle docking involved in exocytosis
GO:0008150 P biological_process
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
4205 O_BomoASG13786_3prime_partial:A_BomoASG_c28376_g1_i1
103bp
4206 O_BomoASG13787_3prime_partial:A_BomoASG_c28376_g1_i1
101bp
4207 O_BomoASG13788_5prime_partial:A_BomoASG_c28376_g1_i2
143bp
 vacuolar_protein_sorting-associated_protein_45_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006904 P vesicle docking involved in exocytosis
GO:0008150 P biological_process
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
4208 O_BomoASG13789_3prime_partial:A_BomoASG_c28376_g1_i2
115bp
4209 O_BomoASG1378_5prime_partial:A_BomoASG_c8401_g1_i1
136bp
4210 O_BomoASG13790_3prime_partial:A_BomoASG_c28376_g1_i2
114bp
4211 O_BomoASG13791_complete:A_BomoASG_c28378_g1_i2
252bp
 mediator_of_RNA_polymerase_II_transcription_subunit_4_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016592 C mediator complex
GO:0070847 C core mediator complex
4212 O_BomoASG13792_internal:A_BomoASG_c28379_g1_i1
238bp
 frizzled-2_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006898 P receptor-mediated endocytosis
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007411 P axon guidance
GO:0007435 P salivary gland morphogenesis
GO:0008045 P motor neuron axon guidance
GO:0008407 P chaeta morphogenesis
GO:0008585 P female gonad development
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0010906 P regulation of glucose metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0016201 P synaptic target inhibition
GO:0016477 P cell migration
GO:0017147 F Wnt-protein binding
GO:0030139 C endocytic vesicle
GO:0030165 F PDZ domain binding
GO:0031290 P retinal ganglion cell axon guidance
GO:0035206 P regulation of hemocyte proliferation
GO:0035567 P non-canonical Wnt signaling pathway
GO:0042813 F Wnt-activated receptor activity
GO:0048675 P axon extension
GO:0050808 P synapse organization
GO:0060070 P canonical Wnt signaling pathway
4213 O_BomoASG13793_internal:A_BomoASG_c28382_g1_i1
429bp
 multidrug_resistance-associated_protein_1_isoform_X5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
4214 O_BomoASG13794_complete:A_BomoASG_c28382_g1_i1
101bp
4215 O_BomoASG13795_internal:A_BomoASG_c28382_g1_i2
154bp
 multidrug_resistance-associated_protein_1_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0008514 F organic anion transmembrane transporter activity
GO:0015432 F ABC-type bile acid transporter activity
GO:0015721 P bile acid and bile salt transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0043225 F ATPase-coupled inorganic anion transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:0098656 P anion transmembrane transport
4216 O_BomoASG13796_complete:A_BomoASG_c28382_g1_i2
102bp
4217 O_BomoASG13797_internal:A_BomoASG_c28382_g1_i4
322bp
 multidrug_resistance-associated_protein_1_isoform_X5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0015722 P canalicular bile acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
4218 O_BomoASG13798_complete:A_BomoASG_c28382_g1_i4
101bp
4219 O_BomoASG13799_5prime_partial:A_BomoASG_c28385_g1_i1
483bp
 LOW_QUALITY_PROTEIN:_N6-adenosine-methyltransferase_70_kDa_subunit_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0001510 P RNA methylation
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006382 P adenosine to inosine editing
GO:0006397 P mRNA processing
GO:0007623 P circadian rhythm
GO:0008168 F methyltransferase activity
GO:0008173 F RNA methyltransferase activity
GO:0010467 P gene expression
GO:0016422 F mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity
GO:0016607 C nuclear speck
GO:0016740 F transferase activity
GO:0019827 P stem cell population maintenance
GO:0031053 P primary miRNA processing
GO:0032259 P methylation
GO:0036396 C RNA N6-methyladenosine methyltransferase complex
GO:0048511 P rhythmic process
GO:0061157 P mRNA destabilization
GO:0080009 P mRNA methylation
GO:1903679 P positive regulation of cap-independent translational initiation
GO:1990744 P primary miRNA methylation
4220 O_BomoASG1379_internal:A_BomoASG_c8442_g1_i1
102bp
 pol_protein_[Danaus_plexippus_plexippus]
4221 O_BomoASG137_internal:A_BomoASG_c1039_g1_i1
224bp
 brain_tumor_protein_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006909 P phagocytosis
GO:0007400 P neuroblast fate determination
GO:0007402 P ganglion mother cell fate determination
GO:0007405 P neuroblast proliferation
GO:0007406 P negative regulation of neuroblast proliferation
GO:0007411 P axon guidance
GO:0007419 P ventral cord development
GO:0007420 P brain development
GO:0008270 F zinc ion binding
GO:0008285 P negative regulation of cell population proliferation
GO:0008356 P asymmetric cell division
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0009303 P rRNA transcription
GO:0017148 P negative regulation of translation
GO:0022008 P neurogenesis
GO:0030182 P neuron differentiation
GO:0030371 F translation repressor activity
GO:0035282 P segmentation
GO:0043025 C neuronal cell body
GO:0045179 C apical cortex
GO:0045180 C basal cortex
GO:0045182 F translation regulator activity
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
GO:0050767 P regulation of neurogenesis
GO:0051726 P regulation of cell cycle
GO:0055060 P asymmetric neuroblast division resulting in ganglion mother cell formation
GO:1900242 P regulation of synaptic vesicle endocytosis
4222 O_BomoASG13800_internal:A_BomoASG_c28386_g1_i1
548bp
 origin_recognition_complex_subunit_3_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005664 C nuclear origin of replication recognition complex
GO:0006260 P DNA replication
4223 O_BomoASG13801_complete:A_BomoASG_c28386_g1_i1
132bp
4224 O_BomoASG13802_internal:A_BomoASG_c28389_g1_i3
195bp
 uncharacterized_protein_LOC101737956_[Bombyx_mori]
GO:0000784 C chromosome, telomeric region
GO:0003684 F damaged DNA binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0031848 P protection from non-homologous end joining at telomere
GO:0035312 F 5'-3' exodeoxyribonuclease activity
GO:0036297 P interstrand cross-link repair
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4225 O_BomoASG13803_3prime_partial:A_BomoASG_c28389_g1_i4
141bp
 uncharacterized_protein_LOC101737956_[Bombyx_mori]
GO:0000715 P nucleotide-excision repair, DNA damage recognition
GO:0000784 C chromosome, telomeric region
GO:0003684 F damaged DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0031848 P protection from non-homologous end joining at telomere
GO:0035312 F 5'-3' exodeoxyribonuclease activity
GO:0036297 P interstrand cross-link repair
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4226 O_BomoASG13804_internal:A_BomoASG_c28390_g1_i1
851bp
 uncharacterized_protein_LOC101743883_isoform_X1_[Bombyx_mori]
4227 O_BomoASG13805_internal:A_BomoASG_c28390_g1_i2
701bp
 uncharacterized_protein_LOC101743883_isoform_X2_[Bombyx_mori]
4228 O_BomoASG13806_internal:A_BomoASG_c28390_g1_i3
761bp
 uncharacterized_protein_LOC101743883_isoform_X2_[Bombyx_mori]
4229 O_BomoASG13807_3prime_partial:A_BomoASG_c28391_g1_i1
260bp
 exostosin-3_isoform_X2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0001888 F glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0006044 P N-acetylglucosamine metabolic process
GO:0007224 P smoothened signaling pathway
GO:0007275 P multicellular organism development
GO:0007367 P segment polarity determination
GO:0008101 P BMP signaling pathway
GO:0008375 F acetylglucosaminyltransferase activity
GO:0015012 P heparan sulfate proteoglycan biosynthetic process
GO:0015014 P heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030201 P heparan sulfate proteoglycan metabolic process
GO:0030210 P heparin biosynthetic process
GO:0042328 F heparan sulfate N-acetylglucosaminyltransferase activity
GO:0046872 F metal ion binding
4230 O_BomoASG13808_internal:A_BomoASG_c28391_g2_i1
393bp
 exostosin-3_isoform_X1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0001888 F glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0006044 P N-acetylglucosamine metabolic process
GO:0007224 P smoothened signaling pathway
GO:0007275 P multicellular organism development
GO:0007367 P segment polarity determination
GO:0008101 P BMP signaling pathway
GO:0008375 F acetylglucosaminyltransferase activity
GO:0015012 P heparan sulfate proteoglycan biosynthetic process
GO:0015014 P heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030201 P heparan sulfate proteoglycan metabolic process
GO:0030210 P heparin biosynthetic process
GO:0042328 F heparan sulfate N-acetylglucosaminyltransferase activity
GO:0046872 F metal ion binding
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