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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4171 O_BomoASG13755_complete:A_BomoASG_c28360_g1_i2
815bp
 eukaryotic_translation_initiation_factor_2-alpha_kinase_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0017148 P negative regulation of translation
4172 O_BomoASG13756_complete:A_BomoASG_c28360_g1_i2
108bp
4173 O_BomoASG13757_complete:A_BomoASG_c28360_g1_i2
106bp
4174 O_BomoASG13758_5prime_partial:A_BomoASG_c28360_g1_i2
101bp
4175 O_BomoASG13759_5prime_partial:A_BomoASG_c28360_g1_i3
437bp
 eukaryotic_translation_initiation_factor_2-alpha_kinase_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0017148 P negative regulation of translation
4176 O_BomoASG1375_5prime_partial:A_BomoASG_c8341_g1_i1
108bp
4177 O_BomoASG13760_3prime_partial:A_BomoASG_c28360_g1_i3
110bp
4178 O_BomoASG13761_3prime_partial:A_BomoASG_c28360_g1_i3
107bp
4179 O_BomoASG13762_5prime_partial:A_BomoASG_c28360_g1_i3
101bp
4180 O_BomoASG13763_internal:A_BomoASG_c28361_g1_i1
306bp
 SH3_and_multiple_ankyrin_repeat_domains_protein_3_[Bombyx_mori]
GO:0001750 C photoreceptor outer segment
GO:0001917 C photoreceptor inner segment
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005883 C neurofilament
GO:0005886 C plasma membrane
GO:0007416 P synapse assembly
GO:0007420 P brain development
GO:0007584 P response to nutrient
GO:0007612 P learning
GO:0007613 P memory
GO:0008022 F protein C-terminus binding
GO:0008328 C ionotropic glutamate receptor complex
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0017124 F SH3 domain binding
GO:0030054 C cell junction
GO:0030426 C growth cone
GO:0030534 P adult behavior
GO:0031526 C brush border membrane
GO:0035176 P social behavior
GO:0035255 F ionotropic glutamate receptor binding
GO:0035640 P exploration behavior
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0043197 C dendritic spine
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0048786 C presynaptic active zone
GO:0060170 C ciliary membrane
GO:0060291 P long-term synaptic potentiation
GO:0060292 P long-term synaptic depression
GO:0071625 P vocalization behavior
4181 O_BomoASG13764_5prime_partial:A_BomoASG_c28361_g1_i1
194bp
4182 O_BomoASG13765_internal:A_BomoASG_c28361_g1_i2
171bp
4183 O_BomoASG13766_internal:A_BomoASG_c28361_g1_i2
170bp
 SH3_and_multiple_ankyrin_repeat_domains_protein_3_[Bombyx_mori]
GO:0001750 C photoreceptor outer segment
GO:0001917 C photoreceptor inner segment
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0005883 C neurofilament
GO:0005886 C plasma membrane
GO:0007416 P synapse assembly
GO:0007612 P learning
GO:0008328 C ionotropic glutamate receptor complex
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0017124 F SH3 domain binding
GO:0030054 C cell junction
GO:0030160 F synaptic receptor adaptor activity
GO:0030426 C growth cone
GO:0030534 P adult behavior
GO:0031526 C brush border membrane
GO:0035176 P social behavior
GO:0035255 F ionotropic glutamate receptor binding
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0043197 C dendritic spine
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0060170 C ciliary membrane
GO:0060291 P long-term synaptic potentiation
GO:0060292 P long-term synaptic depression
GO:0071625 P vocalization behavior
4184 O_BomoASG13767_internal:A_BomoASG_c28361_g1_i3
354bp
 SH3_and_multiple_ankyrin_repeat_domains_protein_3_[Bombyx_mori]
GO:0001750 C photoreceptor outer segment
GO:0001917 C photoreceptor inner segment
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005883 C neurofilament
GO:0005886 C plasma membrane
GO:0007416 P synapse assembly
GO:0007420 P brain development
GO:0007584 P response to nutrient
GO:0007612 P learning
GO:0007613 P memory
GO:0008022 F protein C-terminus binding
GO:0008328 C ionotropic glutamate receptor complex
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0017124 F SH3 domain binding
GO:0030054 C cell junction
GO:0030426 C growth cone
GO:0030534 P adult behavior
GO:0031526 C brush border membrane
GO:0035176 P social behavior
GO:0035255 F ionotropic glutamate receptor binding
GO:0035640 P exploration behavior
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0043197 C dendritic spine
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0048786 C presynaptic active zone
GO:0060170 C ciliary membrane
GO:0060291 P long-term synaptic potentiation
GO:0060292 P long-term synaptic depression
GO:0071625 P vocalization behavior
4185 O_BomoASG13768_5prime_partial:A_BomoASG_c28361_g1_i3
194bp
4186 O_BomoASG13769_5prime_partial:A_BomoASG_c28361_g1_i3
121bp
4187 O_BomoASG1376_internal:A_BomoASG_c8368_g1_i2
106bp
 PREDICTED:_uncharacterized_protein_LOC106710892_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4188 O_BomoASG13770_internal:A_BomoASG_c28361_g1_i4
349bp
 SH3_and_multiple_ankyrin_repeat_domains_protein_3_[Bombyx_mori]
GO:0001750 C photoreceptor outer segment
GO:0001917 C photoreceptor inner segment
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005883 C neurofilament
GO:0005886 C plasma membrane
GO:0007416 P synapse assembly
GO:0007420 P brain development
GO:0007584 P response to nutrient
GO:0007612 P learning
GO:0007613 P memory
GO:0008022 F protein C-terminus binding
GO:0008328 C ionotropic glutamate receptor complex
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0017124 F SH3 domain binding
GO:0030054 C cell junction
GO:0030426 C growth cone
GO:0030534 P adult behavior
GO:0031526 C brush border membrane
GO:0035176 P social behavior
GO:0035255 F ionotropic glutamate receptor binding
GO:0035640 P exploration behavior
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0043197 C dendritic spine
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0048786 C presynaptic active zone
GO:0060170 C ciliary membrane
GO:0060291 P long-term synaptic potentiation
GO:0060292 P long-term synaptic depression
GO:0071625 P vocalization behavior
4189 O_BomoASG13771_5prime_partial:A_BomoASG_c28361_g1_i4
189bp
4190 O_BomoASG13772_5prime_partial:A_BomoASG_c28361_g1_i4
121bp
4191 O_BomoASG13773_3prime_partial:A_BomoASG_c28362_g1_i2
141bp
 DNA_repair_protein_complementing_XP-A_cells_homolog_[Bombyx_mori]
GO:0000110 C nucleotide-excision repair factor 1 complex
GO:0000715 P nucleotide-excision repair, DNA damage recognition
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0033683 P nucleotide-excision repair, DNA incision
GO:0046872 F metal ion binding
GO:0070914 P UV-damage excision repair
GO:1901255 P nucleotide-excision repair involved in interstrand cross-link repair
4192 O_BomoASG13774_5prime_partial:A_BomoASG_c28363_g1_i1
396bp
 bromodomain-containing_protein_1_[Helicoverpa_armigera]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0043966 P histone H3 acetylation
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0070776 C MOZ/MORF histone acetyltransferase complex
GO:1901796 P regulation of signal transduction by p53 class mediator
4193 O_BomoASG13775_internal:A_BomoASG_c28363_g1_i2
128bp
4194 O_BomoASG13776_5prime_partial:A_BomoASG_c28363_g1_i2
101bp
 bromodomain-containing_protein_1_[Helicoverpa_armigera]
4195 O_BomoASG13777_complete:A_BomoASG_c28364_g1_i1
399bp
 tumor_susceptibility_gene_101_protein_[Bombyx_mori]
GO:0000813 C ESCRT I complex
GO:0001558 P regulation of cell growth
GO:0003677 F DNA binding
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005771 C multivesicular body
GO:0005886 C plasma membrane
GO:0006464 P cellular protein modification process
GO:0006513 P protein monoubiquitination
GO:0006810 P transport
GO:0006914 P autophagy
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0008285 P negative regulation of cell population proliferation
GO:0008333 P endosome to lysosome transport
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016197 P endosomal transport
GO:0019058 P viral life cycle
GO:0030154 P cell differentiation
GO:0030216 P keratinocyte differentiation
GO:0030374 F nuclear receptor coactivator activity
GO:0031625 F ubiquitin protein ligase binding
GO:0031902 C late endosome membrane
GO:0036258 P multivesicular body assembly
GO:0039702 P viral budding via host ESCRT complex
GO:0040008 P regulation of growth
GO:0042803 F protein homodimerization activity
GO:0043130 F ubiquitin binding
GO:0043162 P ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0043405 P regulation of MAP kinase activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046755 P viral budding
GO:0046790 F virion binding
GO:0048306 F calcium-dependent protein binding
GO:0048524 P positive regulation of viral process
GO:0051301 P cell division
GO:0070062 C extracellular exosome
GO:0075733 P intracellular transport of virus
GO:0097352 P autophagosome maturation
GO:1902186 P obsolete regulation of viral release from host cell
GO:1902188 P obsolete positive regulation of viral release from host cell
GO:1903543 P positive regulation of exosomal secretion
GO:1903551 P regulation of extracellular exosome assembly
GO:1903772 P regulation of viral budding via host ESCRT complex
GO:1903774 P positive regulation of viral budding via host ESCRT complex
GO:2000397 P positive regulation of ubiquitin-dependent endocytosis
4196 O_BomoASG13778_complete:A_BomoASG_c28366_g3_i2
598bp
 tyrosine-protein_kinase_Dnt_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004888 F transmembrane signaling receptor activity
GO:0005109 F frizzled binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0017147 F Wnt-protein binding
GO:0022038 P corpus callosum development
GO:0030182 P neuron differentiation
GO:0031175 P neuron projection development
GO:0036518 P chemorepulsion of dopaminergic neuron axon
GO:0042813 F Wnt-activated receptor activity
GO:0043410 P positive regulation of MAPK cascade
GO:0048705 P skeletal system morphogenesis
GO:0048843 P negative regulation of axon extension involved in axon guidance
GO:0050919 P negative chemotaxis
GO:0061643 P chemorepulsion of axon
GO:0071679 P commissural neuron axon guidance
GO:1904938 P planar cell polarity pathway involved in axon guidance
GO:1904948 P midbrain dopaminergic neuron differentiation
GO:1904953 P Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation
4197 O_BomoASG13779_internal:A_BomoASG_c28368_g1_i1
311bp
 WASH_complex_subunit_4_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005654 C nucleoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006810 P transport
GO:0007032 P endosome organization
GO:0015031 P protein transport
GO:0016197 P endosomal transport
GO:0031083 C BLOC-1 complex
GO:0071203 C WASH complex
4198 O_BomoASG1377_internal:A_BomoASG_c8401_g1_i1
144bp
 LOW_QUALITY_PROTEIN:_sodium_leak_channel_non-selective_protein_[Bombyx_mori]
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005261 F cation channel activity
GO:0005272 F sodium channel activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0006816 P calcium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034220 P ion transmembrane transport
GO:0034765 P regulation of ion transmembrane transport
GO:0035725 P sodium ion transmembrane transport
GO:0055085 P transmembrane transport
GO:0086010 P membrane depolarization during action potential
GO:0098655 P cation transmembrane transport
4199 O_BomoASG13780_internal:A_BomoASG_c28368_g1_i2
394bp
 WASH_complex_subunit_4_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005654 C nucleoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006810 P transport
GO:0007032 P endosome organization
GO:0015031 P protein transport
GO:0016197 P endosomal transport
GO:0031083 C BLOC-1 complex
GO:0071203 C WASH complex
4200 O_BomoASG13781_5prime_partial:A_BomoASG_c28372_g1_i1
169bp
 cuticular_protein_hypothetical_4_precursor_[Bombyx_mori]
GO:0005576 C extracellular region
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