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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4111 O_BomoASG13700_complete:A_BomoASG_c28334_g1_i2
422bp
 PREDICTED:_ski_oncogene_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0046332 F SMAD binding
4112 O_BomoASG13701_complete:A_BomoASG_c28334_g1_i2
150bp
4113 O_BomoASG13702_complete:A_BomoASG_c28334_g1_i2
107bp
4114 O_BomoASG13703_5prime_partial:A_BomoASG_c28337_g1_i2
343bp
 zinc_finger_protein_432_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
4115 O_BomoASG13704_3prime_partial:A_BomoASG_c28337_g1_i2
106bp
4116 O_BomoASG13705_complete:A_BomoASG_c28341_g1_i1
338bp
 chorion_b-ZIP_transcription_factor_[Bombyx_mori]
4117 O_BomoASG13706_5prime_partial:A_BomoASG_c28341_g1_i1
133bp
4118 O_BomoASG13707_complete:A_BomoASG_c28341_g1_i1
125bp
 chorion_b-ZIP_transcription_factor_[Danaus_plexippus_plexippus]
4119 O_BomoASG13708_complete:A_BomoASG_c28341_g1_i1
112bp
 chorion_b-ZIP_transcription_factor_[Bombyx_mori]
4120 O_BomoASG13709_complete:A_BomoASG_c28341_g1_i1
110bp
4121 O_BomoASG1370_internal:A_BomoASG_c8295_g1_i1
187bp
 retrovirus-like_pol_polyprotein_[Lasius_niger]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4122 O_BomoASG13710_complete:A_BomoASG_c28341_g1_i2
513bp
 chorion_b-ZIP_transcription_factor_[Bombyx_mori]
4123 O_BomoASG13711_5prime_partial:A_BomoASG_c28341_g1_i2
133bp
4124 O_BomoASG13712_complete:A_BomoASG_c28341_g1_i2
125bp
 chorion_b-ZIP_transcription_factor_[Danaus_plexippus_plexippus]
4125 O_BomoASG13713_complete:A_BomoASG_c28341_g1_i2
110bp
4126 O_BomoASG13714_5prime_partial:A_BomoASG_c28342_g1_i1
325bp
 LOW_QUALITY_PROTEIN:_facilitated_trehalose_transporter_Tret1-2_homolog_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005351 F carbohydrate:proton symporter activity
GO:0005355 F glucose transmembrane transporter activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0015574 F trehalose transmembrane transporter activity
GO:0015771 P trehalose transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0035428 P hexose transmembrane transport
GO:0046323 P glucose import
GO:0055085 P transmembrane transport
GO:1904659 P glucose transmembrane transport
4127 O_BomoASG13715_complete:A_BomoASG_c28342_g1_i2
510bp
 LOW_QUALITY_PROTEIN:_facilitated_trehalose_transporter_Tret1-2_homolog_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005351 F carbohydrate:proton symporter activity
GO:0005355 F glucose transmembrane transporter activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0015574 F trehalose transmembrane transporter activity
GO:0015771 P trehalose transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0035428 P hexose transmembrane transport
GO:0046323 P glucose import
GO:0055085 P transmembrane transport
GO:1904659 P glucose transmembrane transport
4128 O_BomoASG13716_complete:A_BomoASG_c28343_g1_i1
120bp
 DNA_polymerase_epsilon_subunit_3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0008622 C epsilon DNA polymerase complex
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046982 F protein heterodimerization activity
GO:0071897 P DNA biosynthetic process
4129 O_BomoASG13717_complete:A_BomoASG_c28344_g1_i1
3161bp
 PREDICTED:_mucin-3A_[Papilio_machaon]
4130 O_BomoASG13718_complete:A_BomoASG_c28344_g1_i1
168bp
4131 O_BomoASG13719_complete:A_BomoASG_c28344_g1_i1
113bp
4132 O_BomoASG1371_3prime_partial:A_BomoASG_c8295_g1_i1
143bp
4133 O_BomoASG13720_complete:A_BomoASG_c28346_g1_i1
186bp
 oocyte_zinc_finger_protein_XlCOF6_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
4134 O_BomoASG13721_complete:A_BomoASG_c28346_g1_i1
100bp
4135 O_BomoASG13722_5prime_partial:A_BomoASG_c28346_g1_i2
495bp
 oocyte_zinc_finger_protein_XlCOF6_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
4136 O_BomoASG13723_complete:A_BomoASG_c28346_g1_i2
100bp
4137 O_BomoASG13724_complete:A_BomoASG_c28346_g1_i3
673bp
 oocyte_zinc_finger_protein_XlCOF6_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
4138 O_BomoASG13725_complete:A_BomoASG_c28346_g1_i3
100bp
4139 O_BomoASG13726_complete:A_BomoASG_c28347_g1_i2
742bp
 protein_sel-1_homolog_1_isoform_X3_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007219 P Notch signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030970 P retrograde protein transport, ER to cytosol
GO:0034976 P response to endoplasmic reticulum stress
GO:0036503 P ERAD pathway
GO:0036513 C Derlin-1 retrotranslocation complex
4140 O_BomoASG13727_complete:A_BomoASG_c28347_g1_i2
196bp
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