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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4081 O_BomoASG13674_complete:A_BomoASG_c28318_g1_i5
208bp
4082 O_BomoASG13675_complete:A_BomoASG_c28318_g1_i5
172bp
4083 O_BomoASG13676_complete:A_BomoASG_c28318_g1_i5
148bp
4084 O_BomoASG13677_complete:A_BomoASG_c28318_g1_i5
102bp
4085 O_BomoASG13678_complete:A_BomoASG_c28320_g1_i1
352bp
 protein_FAM57A_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
4086 O_BomoASG13679_complete:A_BomoASG_c28320_g1_i1
231bp
4087 O_BomoASG1367_internal:A_BomoASG_c8284_g1_i1
140bp
 transmembrane_protein_8A_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005765 C lysosomal membrane
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0070062 C extracellular exosome
4088 O_BomoASG13680_complete:A_BomoASG_c28320_g1_i1
108bp
4089 O_BomoASG13681_5prime_partial:A_BomoASG_c28320_g1_i2
339bp
 protein_FAM57A_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
4090 O_BomoASG13682_complete:A_BomoASG_c28320_g1_i2
231bp
4091 O_BomoASG13683_complete:A_BomoASG_c28320_g1_i2
108bp
4092 O_BomoASG13684_complete:A_BomoASG_c28321_g1_i3
117bp
 mediator_of_RNA_polymerase_II_transcription_subunit_9_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007406 P negative regulation of neuroblast proliferation
GO:0016592 C mediator complex
GO:0019233 P sensory perception of pain
4093 O_BomoASG13685_complete:A_BomoASG_c28324_g1_i1
503bp
 protein_tramtrack,_alpha_isoform_isoform_X3_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001709 P cell fate determination
GO:0001964 P startle response
GO:0002121 P inter-male aggressive behavior
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007298 P border follicle cell migration
GO:0007422 P peripheral nervous system development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008360 P regulation of cell shape
GO:0016476 P regulation of embryonic cell shape
GO:0017053 C transcription repressor complex
GO:0030707 P ovarian follicle cell development
GO:0031208 F POZ domain binding
GO:0031987 P locomotion involved in locomotory behavior
GO:0035001 P dorsal trunk growth, open tracheal system
GO:0035147 P branch fusion, open tracheal system
GO:0035151 P regulation of tube size, open tracheal system
GO:0040003 P chitin-based cuticle development
GO:0042675 P compound eye cone cell differentiation
GO:0042682 P regulation of compound eye cone cell fate specification
GO:0042803 F protein homodimerization activity
GO:0043388 P positive regulation of DNA binding
GO:0045467 P R7 cell development
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046843 P dorsal appendage formation
GO:0046872 F metal ion binding
GO:0048053 P R1/R6 development
GO:0048666 P neuron development
GO:0048750 P compound eye corneal lens morphogenesis
GO:0048813 P dendrite morphogenesis
GO:0048854 P brain morphogenesis
GO:0060446 P branching involved in open tracheal system development
4094 O_BomoASG13686_complete:A_BomoASG_c28324_g1_i2
503bp
 protein_tramtrack,_alpha_isoform_isoform_X3_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001709 P cell fate determination
GO:0001964 P startle response
GO:0002121 P inter-male aggressive behavior
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007298 P border follicle cell migration
GO:0007422 P peripheral nervous system development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008360 P regulation of cell shape
GO:0016476 P regulation of embryonic cell shape
GO:0017053 C transcription repressor complex
GO:0030707 P ovarian follicle cell development
GO:0031208 F POZ domain binding
GO:0031987 P locomotion involved in locomotory behavior
GO:0035001 P dorsal trunk growth, open tracheal system
GO:0035147 P branch fusion, open tracheal system
GO:0035151 P regulation of tube size, open tracheal system
GO:0040003 P chitin-based cuticle development
GO:0042675 P compound eye cone cell differentiation
GO:0042682 P regulation of compound eye cone cell fate specification
GO:0042803 F protein homodimerization activity
GO:0043388 P positive regulation of DNA binding
GO:0045467 P R7 cell development
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046843 P dorsal appendage formation
GO:0046872 F metal ion binding
GO:0048053 P R1/R6 development
GO:0048666 P neuron development
GO:0048750 P compound eye corneal lens morphogenesis
GO:0048813 P dendrite morphogenesis
GO:0048854 P brain morphogenesis
GO:0060446 P branching involved in open tracheal system development
4095 O_BomoASG13687_3prime_partial:A_BomoASG_c28324_g1_i3
483bp
 protein_tramtrack,_beta_isoform_isoform_X2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001709 P cell fate determination
GO:0001964 P startle response
GO:0002121 P inter-male aggressive behavior
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007298 P border follicle cell migration
GO:0007422 P peripheral nervous system development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008360 P regulation of cell shape
GO:0016476 P regulation of embryonic cell shape
GO:0017053 C transcription repressor complex
GO:0030707 P ovarian follicle cell development
GO:0031208 F POZ domain binding
GO:0031987 P locomotion involved in locomotory behavior
GO:0035001 P dorsal trunk growth, open tracheal system
GO:0035147 P branch fusion, open tracheal system
GO:0035151 P regulation of tube size, open tracheal system
GO:0040003 P chitin-based cuticle development
GO:0042675 P compound eye cone cell differentiation
GO:0042682 P regulation of compound eye cone cell fate specification
GO:0042803 F protein homodimerization activity
GO:0043388 P positive regulation of DNA binding
GO:0045467 P R7 cell development
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046843 P dorsal appendage formation
GO:0046872 F metal ion binding
GO:0048053 P R1/R6 development
GO:0048666 P neuron development
GO:0048750 P compound eye corneal lens morphogenesis
GO:0048813 P dendrite morphogenesis
GO:0048854 P brain morphogenesis
GO:0060446 P branching involved in open tracheal system development
4096 O_BomoASG13688_3prime_partial:A_BomoASG_c28326_g1_i2
443bp
 jmjC_domain-containing_histone_demethylation_protein_1_isoform_X2_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007379 P segment specification
GO:0007526 P larval somatic muscle development
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0019005 C SCF ubiquitin ligase complex
GO:0019233 P sensory perception of pain
GO:0031146 P SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031519 C PcG protein complex
GO:0033522 P histone H2A ubiquitination
GO:0034647 F histone H3-tri/di/monomethyl-lysine-4 demethylase activity
GO:0034721 P histone H3-K4 demethylation, trimethyl-H3-K4-specific
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0051864 F histone H3-methyl-lysine-36 demethylase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070544 P histone H3-K36 demethylation
4097 O_BomoASG13689_complete:A_BomoASG_c28326_g1_i2
299bp
4098 O_BomoASG1368_internal:A_BomoASG_c8288_g1_i1
105bp
4099 O_BomoASG13690_5prime_partial:A_BomoASG_c28327_g1_i1
108bp
 forkhead_box_protein_P1_isoform_X2_[Bombyx_mori]
4100 O_BomoASG13691_5prime_partial:A_BomoASG_c28327_g1_i2
345bp
 forkhead_box_protein_P1_isoform_X2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001701 P in utero embryonic development
GO:0002053 P positive regulation of mesenchymal cell proliferation
GO:0002329 P pre-B cell differentiation
GO:0002639 P positive regulation of immunoglobulin production
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007507 P heart development
GO:0007519 P skeletal muscle tissue development
GO:0008045 P motor neuron axon guidance
GO:0021517 P ventral spinal cord development
GO:0030324 P lung development
GO:0033152 P immunoglobulin V(D)J recombination
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0043621 F protein self-association
GO:0045214 P sarcomere organization
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0046982 F protein heterodimerization activity
GO:0048745 P smooth muscle tissue development
GO:0050679 P positive regulation of epithelial cell proliferation
GO:0055007 P cardiac muscle cell differentiation
GO:0060043 P regulation of cardiac muscle cell proliferation
GO:0061140 P lung secretory cell differentiation
GO:0061470 P T follicular helper cell differentiation
GO:0072358 P circulatory system development
GO:0072619 P interleukin-21 production
GO:1901249 P regulation of lung goblet cell differentiation
GO:1901250 P negative regulation of lung goblet cell differentiation
GO:2000727 P positive regulation of cardiac muscle cell differentiation
4101 O_BomoASG13692_complete:A_BomoASG_c28327_g1_i2
131bp
4102 O_BomoASG13693_3prime_partial:A_BomoASG_c28328_g1_i2
340bp
 CMP-sialic_acid_transporter_1_[Helicoverpa_armigera]
GO:0000139 C Golgi membrane
GO:0005351 F carbohydrate:proton symporter activity
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
4103 O_BomoASG13694_complete:A_BomoASG_c28329_g1_i1
220bp
 mediator_of_RNA_polymerase_II_transcription_subunit_7_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016592 C mediator complex
GO:0070847 C core mediator complex
4104 O_BomoASG13695_5prime_partial:A_BomoASG_c28330_g1_i1
290bp
 glutamate_[NMDA]_receptor-associated_protein_1_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032469 P endoplasmic reticulum calcium ion homeostasis
GO:0044325 F transmembrane transporter binding
GO:1902236 P negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway
4105 O_BomoASG13696_internal:A_BomoASG_c28332_g1_i1
252bp
 uncharacterized_protein_LOC110386467_isoform_X2_[Bombyx_mori]
4106 O_BomoASG13697_5prime_partial:A_BomoASG_c28332_g1_i1
101bp
4107 O_BomoASG13698_5prime_partial:A_BomoASG_c28334_g1_i1
327bp
 PREDICTED:_ski_oncogene_[Amyelois_transitella]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0019904 F protein domain specific binding
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0042803 F protein homodimerization activity
GO:0042981 P regulation of apoptotic process
GO:0043565 F sequence-specific DNA binding
GO:0046332 F SMAD binding
GO:0046982 F protein heterodimerization activity
GO:0070491 F DNA-binding transcription factor binding
4108 O_BomoASG13699_complete:A_BomoASG_c28334_g1_i1
107bp
4109 O_BomoASG1369_internal:A_BomoASG_c8288_g1_i1
105bp
4110 O_BomoASG136_internal:A_BomoASG_c990_g1_i1
111bp
 PREDICTED:_WD_repeat-containing_protein_35_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0005930 C axoneme
GO:0030030 P cell projection organization
GO:0030991 C intraciliary transport particle A
GO:0035091 F phosphatidylinositol binding
GO:0035721 P intraciliary retrograde transport
GO:0036064 C ciliary basal body
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0061512 P protein localization to cilium
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