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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3841 O_BomoASG13458_3prime_partial:A_BomoASG_c28225_g1_i2
386bp
 hydroxysteroid_dehydrogenase_isoform_X1_[Bombyx_mori]
GO:0005777 C peroxisome
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
3842 O_BomoASG13459_complete:A_BomoASG_c28226_g1_i1
771bp
 signal_transducer_and_activator_of_transcription_long_isoform_[Bombyx_mori]
GO:0001553 P luteinization
GO:0001779 P natural killer cell differentiation
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004871 F obsolete signal transducer activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007165 P signal transduction
GO:0007259 P receptor signaling pathway via JAK-STAT
GO:0007565 P female pregnancy
GO:0007595 P lactation
GO:0008284 P positive regulation of cell population proliferation
GO:0019218 P regulation of steroid metabolic process
GO:0019221 P cytokine-mediated signaling pathway
GO:0019915 P lipid storage
GO:0030155 P regulation of cell adhesion
GO:0030856 P regulation of epithelial cell differentiation
GO:0030879 P mammary gland development
GO:0038161 P prolactin signaling pathway
GO:0040018 P positive regulation of multicellular organism growth
GO:0042104 P positive regulation of activated T cell proliferation
GO:0043029 P T cell homeostasis
GO:0043066 P negative regulation of apoptotic process
GO:0045086 P positive regulation of interleukin-2 production
GO:0045579 P positive regulation of B cell differentiation
GO:0045647 P negative regulation of erythrocyte differentiation
GO:0045931 P positive regulation of mitotic cell cycle
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046543 P development of secondary female sexual characteristics
GO:0050729 P positive regulation of inflammatory response
3843 O_BomoASG1345_internal:A_BomoASG_c8126_g1_i1
102bp
 transcriptional_adapter_2B_isoform_X1_[Bombyx_mori]
3844 O_BomoASG13460_complete:A_BomoASG_c28226_g1_i1
287bp
3845 O_BomoASG13461_complete:A_BomoASG_c28226_g1_i1
171bp
3846 O_BomoASG13462_complete:A_BomoASG_c28226_g1_i1
112bp
3847 O_BomoASG13463_complete:A_BomoASG_c28226_g1_i1
100bp
3848 O_BomoASG13464_complete:A_BomoASG_c28226_g1_i2
734bp
 signal_transducer_and_activator_of_transcription_[Bombyx_mori]
GO:0000255 P allantoin metabolic process
GO:0000979 F RNA polymerase II core promoter sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001553 P luteinization
GO:0001666 P response to hypoxia
GO:0001779 P natural killer cell differentiation
GO:0001889 P liver development
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003690 F double-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006101 P citrate metabolic process
GO:0006103 P 2-oxoglutarate metabolic process
GO:0006105 P succinate metabolic process
GO:0006107 P oxaloacetate metabolic process
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006549 P isoleucine metabolic process
GO:0006573 P valine metabolic process
GO:0006600 P creatine metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006953 P acute-phase response
GO:0007165 P signal transduction
GO:0007259 P receptor signaling pathway via JAK-STAT
GO:0007548 P sex differentiation
GO:0007565 P female pregnancy
GO:0007595 P lactation
GO:0008284 P positive regulation of cell population proliferation
GO:0019218 P regulation of steroid metabolic process
GO:0019221 P cytokine-mediated signaling pathway
GO:0019530 P taurine metabolic process
GO:0019903 F protein phosphatase binding
GO:0019915 P lipid storage
GO:0030155 P regulation of cell adhesion
GO:0030856 P regulation of epithelial cell differentiation
GO:0032355 P response to estradiol
GO:0032496 P response to lipopolysaccharide
GO:0032819 P positive regulation of natural killer cell proliferation
GO:0032825 P positive regulation of natural killer cell differentiation
GO:0032870 P cellular response to hormone stimulus
GO:0033077 P T cell differentiation in thymus
GO:0035259 F glucocorticoid receptor binding
GO:0038161 P prolactin signaling pathway
GO:0040014 P regulation of multicellular organism growth
GO:0040018 P positive regulation of multicellular organism growth
GO:0042104 P positive regulation of activated T cell proliferation
GO:0042448 P progesterone metabolic process
GO:0043029 P T cell homeostasis
GO:0043066 P negative regulation of apoptotic process
GO:0043434 P response to peptide hormone
GO:0043565 F sequence-specific DNA binding
GO:0045086 P positive regulation of interleukin-2 production
GO:0045471 P response to ethanol
GO:0045579 P positive regulation of B cell differentiation
GO:0045588 P positive regulation of gamma-delta T cell differentiation
GO:0045621 P positive regulation of lymphocyte differentiation
GO:0045647 P negative regulation of erythrocyte differentiation
GO:0045931 P positive regulation of mitotic cell cycle
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0045954 P positive regulation of natural killer cell mediated cytotoxicity
GO:0046449 P creatinine metabolic process
GO:0046543 P development of secondary female sexual characteristics
GO:0046544 P development of secondary male sexual characteristics
GO:0046983 F protein dimerization activity
GO:0048541 P Peyer's patch development
GO:0048661 P positive regulation of smooth muscle cell proliferation
GO:0050729 P positive regulation of inflammatory response
GO:0051272 P positive regulation of cellular component movement
GO:0060397 P growth hormone receptor signaling pathway via JAK-STAT
GO:0070669 P response to interleukin-2
GO:0070670 P response to interleukin-4
GO:0070672 P response to interleukin-15
GO:0071363 P cellular response to growth factor stimulus
GO:0071364 P cellular response to epidermal growth factor stimulus
GO:0097531 P mast cell migration
3849 O_BomoASG13465_complete:A_BomoASG_c28226_g1_i2
287bp
3850 O_BomoASG13466_complete:A_BomoASG_c28226_g1_i2
171bp
3851 O_BomoASG13467_complete:A_BomoASG_c28226_g1_i2
112bp
3852 O_BomoASG13468_complete:A_BomoASG_c28226_g1_i3
771bp
 signal_transducer_and_activator_of_transcription_long_isoform_[Bombyx_mori]
GO:0001553 P luteinization
GO:0001779 P natural killer cell differentiation
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004871 F obsolete signal transducer activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007165 P signal transduction
GO:0007259 P receptor signaling pathway via JAK-STAT
GO:0007565 P female pregnancy
GO:0007595 P lactation
GO:0008284 P positive regulation of cell population proliferation
GO:0019218 P regulation of steroid metabolic process
GO:0019221 P cytokine-mediated signaling pathway
GO:0019915 P lipid storage
GO:0030155 P regulation of cell adhesion
GO:0030856 P regulation of epithelial cell differentiation
GO:0030879 P mammary gland development
GO:0038161 P prolactin signaling pathway
GO:0040018 P positive regulation of multicellular organism growth
GO:0042104 P positive regulation of activated T cell proliferation
GO:0043029 P T cell homeostasis
GO:0043066 P negative regulation of apoptotic process
GO:0045086 P positive regulation of interleukin-2 production
GO:0045579 P positive regulation of B cell differentiation
GO:0045647 P negative regulation of erythrocyte differentiation
GO:0045931 P positive regulation of mitotic cell cycle
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046543 P development of secondary female sexual characteristics
GO:0050729 P positive regulation of inflammatory response
3853 O_BomoASG13469_complete:A_BomoASG_c28226_g1_i3
287bp
3854 O_BomoASG1346_5prime_partial:A_BomoASG_c8142_g1_i1
122bp
 uncharacterized_protein_LOC101743023_[Bombyx_mori]
3855 O_BomoASG13470_complete:A_BomoASG_c28226_g1_i3
171bp
3856 O_BomoASG13471_complete:A_BomoASG_c28226_g1_i3
112bp
3857 O_BomoASG13472_complete:A_BomoASG_c28226_g1_i3
100bp
3858 O_BomoASG13473_complete:A_BomoASG_c28228_g1_i1
407bp
 uncharacterized_protein_LOC101741263_isoform_X1_[Bombyx_mori]
3859 O_BomoASG13474_complete:A_BomoASG_c28231_g1_i1
118bp
 GSK3-beta_interaction_protein_isoform_X1_[Bombyx_mori]
GO:0005737 C cytoplasm
3860 O_BomoASG13475_complete:A_BomoASG_c28232_g1_i1
280bp
 peroxisomal_membrane_protein_PMP34-like_isoform_X1_[Bombyx_mori]
GO:0000295 F adenine nucleotide transmembrane transporter activity
GO:0001561 P fatty acid alpha-oxidation
GO:0003735 F structural constituent of ribosome
GO:0005347 F ATP transmembrane transporter activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005779 C integral component of peroxisomal membrane
GO:0006412 P translation
GO:0006635 P fatty acid beta-oxidation
GO:0006810 P transport
GO:0015217 F ADP transmembrane transporter activity
GO:0015228 F coenzyme A transmembrane transporter activity
GO:0015230 F FAD transmembrane transporter activity
GO:0015866 P ADP transport
GO:0015867 P ATP transport
GO:0015908 P fatty acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035349 P coenzyme A transmembrane transport
GO:0035350 P FAD transmembrane transport
GO:0043132 P NAD transport
GO:0043231 C intracellular membrane-bounded organelle
GO:0044610 F FMN transmembrane transporter activity
GO:0051087 F chaperone binding
GO:0051724 F NAD transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:0080121 P AMP transport
GO:0080122 F AMP transmembrane transporter activity
GO:1901679 P nucleotide transmembrane transport
3861 O_BomoASG13476_5prime_partial:A_BomoASG_c28232_g1_i2
256bp
 peroxisomal_membrane_protein_PMP34-like_isoform_X1_[Bombyx_mori]
GO:0000295 F adenine nucleotide transmembrane transporter activity
GO:0001561 P fatty acid alpha-oxidation
GO:0003735 F structural constituent of ribosome
GO:0005347 F ATP transmembrane transporter activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005779 C integral component of peroxisomal membrane
GO:0006412 P translation
GO:0006635 P fatty acid beta-oxidation
GO:0006810 P transport
GO:0015217 F ADP transmembrane transporter activity
GO:0015228 F coenzyme A transmembrane transporter activity
GO:0015230 F FAD transmembrane transporter activity
GO:0015866 P ADP transport
GO:0015867 P ATP transport
GO:0015908 P fatty acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035349 P coenzyme A transmembrane transport
GO:0035350 P FAD transmembrane transport
GO:0043132 P NAD transport
GO:0043231 C intracellular membrane-bounded organelle
GO:0044610 F FMN transmembrane transporter activity
GO:0051087 F chaperone binding
GO:0051724 F NAD transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:0080121 P AMP transport
GO:0080122 F AMP transmembrane transporter activity
GO:1901679 P nucleotide transmembrane transport
3862 O_BomoASG13477_internal:A_BomoASG_c28234_g1_i1
494bp
 putative_uncharacterized_protein_DDB_G0282499_[Bombyx_mori]
3863 O_BomoASG13478_internal:A_BomoASG_c28236_g1_i1
136bp
 probable_ribosome_production_factor_1_[Bombyx_mori]
GO:0000027 P ribosomal large subunit assembly
GO:0000460 P maturation of 5.8S rRNA
GO:0000470 P maturation of LSU-rRNA
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0019843 F rRNA binding
GO:0030687 C preribosome, large subunit precursor
GO:0042134 F rRNA primary transcript binding
GO:0042254 P ribosome biogenesis
3864 O_BomoASG13479_3prime_partial:A_BomoASG_c28236_g1_i2
269bp
 probable_ribosome_production_factor_1_[Bombyx_mori]
GO:0000027 P ribosomal large subunit assembly
GO:0000460 P maturation of 5.8S rRNA
GO:0000470 P maturation of LSU-rRNA
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0019843 F rRNA binding
GO:0030687 C preribosome, large subunit precursor
GO:0042134 F rRNA primary transcript binding
GO:0042254 P ribosome biogenesis
3865 O_BomoASG1347_3prime_partial:A_BomoASG_c8149_g1_i1
179bp
 tonsoku-like_protein_[Helicoverpa_armigera]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
3866 O_BomoASG13480_complete:A_BomoASG_c28236_g1_i2
127bp
3867 O_BomoASG13481_complete:A_BomoASG_c28239_g1_i1
341bp
 presenilins-associated_rhomboid-like_protein,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0004175 F endopeptidase activity
GO:0004252 F serine-type endopeptidase activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0030162 P regulation of proteolysis
GO:0090201 P negative regulation of release of cytochrome c from mitochondria
GO:1903146 P regulation of autophagy of mitochondrion
GO:1903214 P regulation of protein targeting to mitochondrion
GO:2000377 P regulation of reactive oxygen species metabolic process
GO:2001243 P negative regulation of intrinsic apoptotic signaling pathway
3868 O_BomoASG13482_3prime_partial:A_BomoASG_c28241_g1_i1
726bp
 protein_suppressor_of_forked_isoform_X1_[Bombyx_mori]
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005848 C mRNA cleavage stimulating factor complex
GO:0006379 P mRNA cleavage
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0016070 P RNA metabolic process
GO:0031123 P RNA 3'-end processing
GO:1903220 P positive regulation of malate dehydrogenase (decarboxylating) (NADP+) activity
3869 O_BomoASG13483_5prime_partial:A_BomoASG_c28241_g1_i1
275bp
 hypothetical_protein_ALC57_04308,_partial_[Trachymyrmex_cornetzi]
3870 O_BomoASG13484_complete:A_BomoASG_c28241_g1_i1
206bp
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