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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3871 O_BomoASG13485_5prime_partial:A_BomoASG_c28241_g1_i1
122bp
3872 O_BomoASG13486_complete:A_BomoASG_c28241_g1_i1
112bp
3873 O_BomoASG13487_complete:A_BomoASG_c28242_g1_i1
1705bp
 death-inducer_obliterator_1_isoform_X3_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0097190 P apoptotic signaling pathway
3874 O_BomoASG13488_complete:A_BomoASG_c28242_g1_i1
112bp
 death-inducer_obliterator_1_isoform_X2_[Bombyx_mori]
3875 O_BomoASG13489_complete:A_BomoASG_c28242_g1_i1
112bp
3876 O_BomoASG1348_5prime_partial:A_BomoASG_c8149_g1_i1
144bp
3877 O_BomoASG13490_complete:A_BomoASG_c28242_g1_i1
104bp
3878 O_BomoASG13491_complete:A_BomoASG_c28242_g1_i2
1807bp
 death-inducer_obliterator_1_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0097190 P apoptotic signaling pathway
3879 O_BomoASG13492_complete:A_BomoASG_c28242_g1_i2
104bp
3880 O_BomoASG13493_complete:A_BomoASG_c28242_g1_i3
1645bp
 death-inducer_obliterator_1_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0097190 P apoptotic signaling pathway
3881 O_BomoASG13494_complete:A_BomoASG_c28242_g1_i3
104bp
3882 O_BomoASG13495_internal:A_BomoASG_c28244_g1_i1
4280bp
 uncharacterized_protein_LOC110384740_[Bombyx_mori]
3883 O_BomoASG13496_complete:A_BomoASG_c28244_g1_i1
101bp
3884 O_BomoASG13497_complete:A_BomoASG_c28245_g1_i1
352bp
 uncharacterized_protein_LOC101736201_isoform_X1_[Bombyx_mori]
3885 O_BomoASG13498_complete:A_BomoASG_c28245_g1_i1
131bp
3886 O_BomoASG13499_internal:A_BomoASG_c28245_g1_i2
151bp
 uncharacterized_protein_LOC101736201_isoform_X2_[Bombyx_mori]
3887 O_BomoASG1349_internal:A_BomoASG_c8151_g1_i1
111bp
 PREDICTED:_uncharacterized_protein_LOC106708858_[Papilio_machaon]
3888 O_BomoASG134_internal:A_BomoASG_c921_g1_i1
115bp
 nucleolar_protein_11_[Bombyx_mori]
3889 O_BomoASG13500_3prime_partial:A_BomoASG_c28248_g1_i1
140bp
 PREDICTED:_uncharacterized_protein_LOC106659198_[Trichogramma_pretiosum]
3890 O_BomoASG13501_3prime_partial:A_BomoASG_c28248_g1_i2
140bp
 PREDICTED:_uncharacterized_protein_LOC106659198_[Trichogramma_pretiosum]
3891 O_BomoASG13502_5prime_partial:A_BomoASG_c28248_g1_i2
126bp
 PREDICTED:_uncharacterized_protein_LOC106659198_[Trichogramma_pretiosum]
3892 O_BomoASG13503_3prime_partial:A_BomoASG_c28256_g1_i1
196bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101744503_[Bombyx_mori]
3893 O_BomoASG13504_5prime_partial:A_BomoASG_c28259_g1_i1
635bp
 R3H_domain-containing_protein_2_isoform_X1_[Bombyx_mori]
3894 O_BomoASG13505_complete:A_BomoASG_c28259_g1_i1
134bp
3895 O_BomoASG13506_complete:A_BomoASG_c28259_g1_i1
134bp
3896 O_BomoASG13507_complete:A_BomoASG_c28259_g1_i2
219bp
 R3H_domain-containing_protein_2_isoform_X1_[Bombyx_mori]
3897 O_BomoASG13508_complete:A_BomoASG_c28260_g1_i1
294bp
 eIF2B-alpha_protein_[Bombyx_mori]
GO:0003743 F translation initiation factor activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005851 C eukaryotic translation initiation factor 2B complex
GO:0005886 C plasma membrane
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006446 P regulation of translational initiation
GO:0014003 P oligodendrocyte development
GO:0016020 C membrane
GO:0019509 P L-methionine salvage from methylthioadenosine
GO:0043547 P positive regulation of GTPase activity
GO:0044237 P cellular metabolic process
GO:0046523 F S-methyl-5-thioribose-1-phosphate isomerase activity
GO:0051716 P cellular response to stimulus
3898 O_BomoASG13509_complete:A_BomoASG_c28260_g1_i2
201bp
 eIF2B-alpha_protein_[Bombyx_mori]
GO:0003743 F translation initiation factor activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005850 C eukaryotic translation initiation factor 2 complex
GO:0005851 C eukaryotic translation initiation factor 2B complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0009408 P response to heat
GO:0009749 P response to glucose
GO:0014003 P oligodendrocyte development
GO:0019003 F GDP binding
GO:0019509 P L-methionine salvage from methylthioadenosine
GO:0043434 P response to peptide hormone
GO:0043547 P positive regulation of GTPase activity
GO:0044237 P cellular metabolic process
GO:0046523 F S-methyl-5-thioribose-1-phosphate isomerase activity
GO:0051716 P cellular response to stimulus
GO:1990928 P response to amino acid starvation
3899 O_BomoASG1350_internal:A_BomoASG_c8152_g1_i1
130bp
 carboxypeptidase_N_subunit_2_[Bombyx_mori]
3900 O_BomoASG13510_complete:A_BomoASG_c28264_g1_i1
163bp
 39S_ribosomal_protein_L41,_mitochondrial_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
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