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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3301 O_BomoASG12972_5prime_partial:A_BomoASG_c27976_g1_i2
151bp
 uncharacterized_protein_LOC110384828_[Bombyx_mori]
3302 O_BomoASG12973_5prime_partial:A_BomoASG_c27977_g1_i1
285bp
 uncharacterized_protein_LOC110378407_[Helicoverpa_armigera]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
3303 O_BomoASG12974_3prime_partial:A_BomoASG_c27978_g1_i1
270bp
 dystrophin-like,_partial_[Helicoverpa_armigera]
GO:0002162 F dystroglycan binding
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016203 P muscle attachment
GO:0030054 C cell junction
GO:0042383 C sarcolemma
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0046872 F metal ion binding
3304 O_BomoASG12975_5prime_partial:A_BomoASG_c27978_g1_i1
225bp
3305 O_BomoASG12976_internal:A_BomoASG_c27978_g1_i2
174bp
 dystrophin-like,_partial_[Helicoverpa_armigera]
GO:0002162 F dystroglycan binding
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016203 P muscle attachment
GO:0030054 C cell junction
GO:0042383 C sarcolemma
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0046872 F metal ion binding
3306 O_BomoASG12977_internal:A_BomoASG_c27978_g1_i2
174bp
3307 O_BomoASG12978_5prime_partial:A_BomoASG_c27978_g1_i2
161bp
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005245 F voltage-gated calcium channel activity
GO:0005262 F calcium channel activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005886 C plasma membrane
GO:0005891 C voltage-gated calcium channel complex
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0007204 P positive regulation of cytosolic calcium ion concentration
GO:0007268 P chemical synaptic transmission
GO:0008331 F high voltage-gated calcium channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019233 P sensory perception of pain
GO:0034765 P regulation of ion transmembrane transport
GO:0043204 C perikaryon
GO:0043234 C protein-containing complex
GO:0046872 F metal ion binding
GO:0055085 P transmembrane transport
GO:0070509 P calcium ion import
GO:0070588 P calcium ion transmembrane transport
GO:0086010 P membrane depolarization during action potential
3308 O_BomoASG12979_complete:A_BomoASG_c27979_g1_i1
144bp
 inner_centromere_protein_A_[Bombyx_mori]
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0000910 P cytokinesis
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005721 C pericentric heterochromatin
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0030496 C midbody
GO:0043234 C protein-containing complex
GO:0051301 P cell division
3309 O_BomoASG1297_internal:A_BomoASG_c7759_g1_i1
102bp
 ecdysone_receptor,_partial_[Bombyx_mandarina]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0004884 F nuclear receptor activity
GO:0005496 F steroid binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0035076 P ecdysone receptor-mediated signaling pathway
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
3310 O_BomoASG12980_5prime_partial:A_BomoASG_c27979_g1_i2
206bp
 inner_centromere_protein_A_[Bombyx_mori]
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0000910 P cytokinesis
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005721 C pericentric heterochromatin
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0030496 C midbody
GO:0043234 C protein-containing complex
GO:0051301 P cell division
3311 O_BomoASG12981_complete:A_BomoASG_c27981_g1_i1
237bp
 Nep1_protein_[Bombyx_mori]
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0009267 P cellular response to starvation
GO:0016740 F transferase activity
GO:0019843 F rRNA binding
GO:0022008 P neurogenesis
GO:0031167 P rRNA methylation
GO:0032040 C small-subunit processome
GO:0032259 P methylation
GO:0040018 P positive regulation of multicellular organism growth
GO:0042254 P ribosome biogenesis
GO:0042742 P defense response to bacterium
GO:0070037 F rRNA (pseudouridine) methyltransferase activity
GO:0070475 P rRNA base methylation
3312 O_BomoASG12982_complete:A_BomoASG_c27982_g1_i1
126bp
 NAD-dependent_protein_deacylase_Sirt4_[Bombyx_mori]
GO:0000820 P regulation of glutamine family amino acid metabolic process
GO:0003950 F NAD+ ADP-ribosyltransferase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0006471 P protein ADP-ribosylation
GO:0006541 P glutamine metabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0034979 F NAD-dependent protein deacetylase activity
GO:0034983 P peptidyl-lysine deacetylation
GO:0046322 P negative regulation of fatty acid oxidation
GO:0046676 P negative regulation of insulin secretion
GO:0046872 F metal ion binding
GO:0046889 P positive regulation of lipid biosynthetic process
GO:0047708 F biotinidase activity
GO:0061690 F lipoamidase activity
GO:0070403 F NAD+ binding
GO:0072350 P tricarboxylic acid metabolic process
GO:1904182 P regulation of pyruvate dehydrogenase activity
3313 O_BomoASG12983_complete:A_BomoASG_c27982_g1_i2
256bp
 NAD-dependent_protein_deacylase_Sirt4_[Bombyx_mori]
GO:0004407 F histone deacetylase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0016575 P histone deacetylation
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0070403 F NAD+ binding
3314 O_BomoASG12984_complete:A_BomoASG_c27982_g1_i3
126bp
 NAD-dependent_protein_deacylase_Sirt4_[Bombyx_mori]
GO:0000820 P regulation of glutamine family amino acid metabolic process
GO:0003950 F NAD+ ADP-ribosyltransferase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0006471 P protein ADP-ribosylation
GO:0006541 P glutamine metabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0034979 F NAD-dependent protein deacetylase activity
GO:0034983 P peptidyl-lysine deacetylation
GO:0046322 P negative regulation of fatty acid oxidation
GO:0046676 P negative regulation of insulin secretion
GO:0046872 F metal ion binding
GO:0046889 P positive regulation of lipid biosynthetic process
GO:0047708 F biotinidase activity
GO:0061690 F lipoamidase activity
GO:0070403 F NAD+ binding
GO:0072350 P tricarboxylic acid metabolic process
GO:1904182 P regulation of pyruvate dehydrogenase activity
3315 O_BomoASG12985_complete:A_BomoASG_c27982_g1_i4
126bp
 NAD-dependent_protein_deacylase_Sirt4_[Bombyx_mori]
GO:0000820 P regulation of glutamine family amino acid metabolic process
GO:0003950 F NAD+ ADP-ribosyltransferase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0006471 P protein ADP-ribosylation
GO:0006541 P glutamine metabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0034979 F NAD-dependent protein deacetylase activity
GO:0034983 P peptidyl-lysine deacetylation
GO:0046322 P negative regulation of fatty acid oxidation
GO:0046676 P negative regulation of insulin secretion
GO:0046872 F metal ion binding
GO:0046889 P positive regulation of lipid biosynthetic process
GO:0047708 F biotinidase activity
GO:0061690 F lipoamidase activity
GO:0070403 F NAD+ binding
GO:0072350 P tricarboxylic acid metabolic process
GO:1904182 P regulation of pyruvate dehydrogenase activity
3316 O_BomoASG12986_5prime_partial:A_BomoASG_c27983_g1_i1
294bp
 chondroitin_sulfate_synthase_1_[Bombyx_mori]
GO:0002063 P chondrocyte development
GO:0005576 C extracellular region
GO:0005794 C Golgi apparatus
GO:0008376 F acetylgalactosaminyltransferase activity
GO:0009954 P proximal/distal pattern formation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030206 P chondroitin sulfate biosynthetic process
GO:0030279 P negative regulation of ossification
GO:0031667 P response to nutrient levels
GO:0032580 C Golgi cisterna membrane
GO:0045880 P positive regulation of smoothened signaling pathway
GO:0046872 F metal ion binding
GO:0047238 F glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity
GO:0050510 F N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity
GO:0051216 P cartilage development
GO:0051923 P sulfation
GO:0060349 P bone morphogenesis
3317 O_BomoASG12987_5prime_partial:A_BomoASG_c27985_g1_i1
100bp
3318 O_BomoASG12988_complete:A_BomoASG_c27987_g1_i1
311bp
 histone-lysine_N-methyltransferase_pr-set7_[Bombyx_mori]
GO:0000077 P DNA damage checkpoint signaling
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0030261 P chromosome condensation
GO:0032259 P methylation
GO:0034771 P histone H4-K20 monomethylation
GO:0035067 P negative regulation of histone acetylation
GO:0042799 F histone methyltransferase activity (H4-K20 specific)
GO:0051301 P cell division
3319 O_BomoASG12989_complete:A_BomoASG_c27987_g1_i1
129bp
3320 O_BomoASG1298_complete:A_BomoASG_c7780_g1_i1
459bp
 kynurenine--oxoglutarate_transaminase_3_isoform_X1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005739 C mitochondrion
GO:0006103 P 2-oxoglutarate metabolic process
GO:0006520 P cellular amino acid metabolic process
GO:0008483 F transaminase activity
GO:0009058 P biosynthetic process
GO:0016212 F kynurenine-oxoglutarate transaminase activity
GO:0016740 F transferase activity
GO:0016829 F lyase activity
GO:0030170 F pyridoxal phosphate binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0047315 F kynurenine-glyoxylate transaminase activity
GO:0047804 F cysteine-S-conjugate beta-lyase activity
GO:0070189 P kynurenine metabolic process
GO:0097052 P L-kynurenine metabolic process
3321 O_BomoASG12990_complete:A_BomoASG_c27987_g1_i1
125bp
3322 O_BomoASG12991_5prime_partial:A_BomoASG_c27988_g1_i1
165bp
 carboxypeptidase_D_isoform_X3_[Bombyx_mori]
3323 O_BomoASG12992_internal:A_BomoASG_c27989_g1_i1
386bp
 oviduct-specific_glycoprotein_[Bombyx_mori]
3324 O_BomoASG12993_5prime_partial:A_BomoASG_c27989_g1_i1
112bp
3325 O_BomoASG12994_internal:A_BomoASG_c27989_g1_i2
201bp
 oviduct-specific_glycoprotein_[Bombyx_mori]
3326 O_BomoASG12995_internal:A_BomoASG_c27990_g1_i1
515bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_KIAA1109_[Bombyx_mori]
GO:0001558 P regulation of cell growth
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0006629 P lipid metabolic process
GO:0007283 P spermatogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019915 P lipid storage
GO:0045444 P fat cell differentiation
GO:0051647 P nucleus localization
GO:0060612 P adipose tissue development
3327 O_BomoASG12996_complete:A_BomoASG_c27990_g1_i1
262bp
3328 O_BomoASG12997_complete:A_BomoASG_c27990_g1_i1
154bp
3329 O_BomoASG12998_3prime_partial:A_BomoASG_c27991_g1_i1
315bp
 uncharacterized_protein_LOC101741811_[Bombyx_mori]
GO:0001682 P tRNA 5'-leader removal
GO:0004526 F ribonuclease P activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005655 C nucleolar ribonuclease P complex
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008033 P tRNA processing
GO:0016787 F hydrolase activity
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
3330 O_BomoASG12999_internal:A_BomoASG_c27991_g1_i2
292bp
 uncharacterized_protein_LOC101741811_[Bombyx_mori]
GO:0001682 P tRNA 5'-leader removal
GO:0004526 F ribonuclease P activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005655 C nucleolar ribonuclease P complex
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008033 P tRNA processing
GO:0016787 F hydrolase activity
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
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