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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3271 O_BomoASG12945_3prime_partial:A_BomoASG_c27958_g2_i1
154bp
 WD_repeat-containing_protein_47_isoform_X3_[Helicoverpa_armigera]
3272 O_BomoASG12946_3prime_partial:A_BomoASG_c27958_g1_i4
417bp
 rho_guanine_nucleotide_exchange_factor_11_[Bombyx_mori]
GO:0001664 F G protein-coupled receptor binding
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0070062 C extracellular exosome
3273 O_BomoASG12947_5prime_partial:A_BomoASG_c27958_g1_i4
114bp
3274 O_BomoASG12948_internal:A_BomoASG_c27960_g1_i1
529bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101742325_[Bombyx_mori]
3275 O_BomoASG12949_5prime_partial:A_BomoASG_c27962_g1_i1
449bp
 protein_I'm_not_dead_yet_isoform_X2_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006814 P sodium ion transport
GO:0006848 P pyruvate transport
GO:0008340 P determination of adult lifespan
GO:0010889 P regulation of sequestering of triglyceride
GO:0015137 F citrate transmembrane transporter activity
GO:0015141 F succinate transmembrane transporter activity
GO:0015142 F tricarboxylic acid transmembrane transporter activity
GO:0015744 P succinate transport
GO:0015746 P citrate transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0035674 P tricarboxylic acid transmembrane transport
GO:0050833 F pyruvate transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:0071422 P succinate transmembrane transport
GO:1901475 P pyruvate transmembrane transport
3276 O_BomoASG1294_complete:A_BomoASG_c7722_g1_i1
310bp
 cysteine-type_peptidase_isoform_X1_[Bombyx_mori]
GO:0004843 F thiol-dependent deubiquitinase
GO:0005575 C cellular_component
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0046872 F metal ion binding
3277 O_BomoASG12950_complete:A_BomoASG_c27962_g1_i1
157bp
3278 O_BomoASG12951_5prime_partial:A_BomoASG_c27962_g1_i2
626bp
 protein_I'm_not_dead_yet_isoform_X1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006814 P sodium ion transport
GO:0006848 P pyruvate transport
GO:0008340 P determination of adult lifespan
GO:0010889 P regulation of sequestering of triglyceride
GO:0015137 F citrate transmembrane transporter activity
GO:0015141 F succinate transmembrane transporter activity
GO:0015142 F tricarboxylic acid transmembrane transporter activity
GO:0015744 P succinate transport
GO:0015746 P citrate transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0035674 P tricarboxylic acid transmembrane transport
GO:0050833 F pyruvate transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:0071422 P succinate transmembrane transport
GO:1901475 P pyruvate transmembrane transport
3279 O_BomoASG12952_complete:A_BomoASG_c27962_g1_i2
157bp
3280 O_BomoASG12953_3prime_partial:A_BomoASG_c27963_g1_i1
289bp
 alpha-tocopherol_transfer_protein-like_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005622 C intracellular anatomical structure
GO:0006810 P transport
GO:0016020 C membrane
3281 O_BomoASG12954_complete:A_BomoASG_c27963_g1_i1
125bp
3282 O_BomoASG12955_3prime_partial:A_BomoASG_c27963_g1_i2
289bp
 alpha-tocopherol_transfer_protein-like_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005622 C intracellular anatomical structure
GO:0006810 P transport
GO:0016020 C membrane
3283 O_BomoASG12956_complete:A_BomoASG_c27963_g1_i2
125bp
3284 O_BomoASG12957_complete:A_BomoASG_c27966_g1_i1
698bp
 ral_guanine_nucleotide_dissociation_stimulator_isoform_X6_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005575 C cellular_component
GO:0005829 C cytosol
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008321 F guanyl-nucleotide exchange factor activity
GO:0043547 P positive regulation of GTPase activity
3285 O_BomoASG12958_complete:A_BomoASG_c27966_g1_i1
101bp
3286 O_BomoASG12959_5prime_partial:A_BomoASG_c27966_g1_i2
440bp
 ral_guanine_nucleotide_dissociation_stimulator_isoform_X1_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005575 C cellular_component
GO:0005829 C cytosol
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008321 F guanyl-nucleotide exchange factor activity
GO:0043547 P positive regulation of GTPase activity
3287 O_BomoASG1295_5prime_partial:A_BomoASG_c7733_g1_i1
139bp
3288 O_BomoASG12960_5prime_partial:A_BomoASG_c27968_g1_i1
454bp
 sprouty-related,_EVH1_domain-containing_protein_1_isoform_X2_[Bombyx_mori]
GO:0000188 P obsolete inactivation of MAPK activity
GO:0005173 F stem cell factor receptor binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007275 P multicellular organism development
GO:0009966 P regulation of signal transduction
GO:0010801 P negative regulation of peptidyl-threonine phosphorylation
GO:0016020 C membrane
GO:0019901 F protein kinase binding
GO:0030291 F protein serine/threonine kinase inhibitor activity
GO:0030658 C transport vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0043517 P positive regulation of DNA damage response, signal transduction by p53 class mediator
GO:0090311 P regulation of protein deacetylation
3289 O_BomoASG12961_complete:A_BomoASG_c27968_g1_i1
195bp
3290 O_BomoASG12962_complete:A_BomoASG_c27969_g1_i1
268bp
 protein_saal1_[Bombyx_mori]
3291 O_BomoASG12963_complete:A_BomoASG_c27969_g1_i1
114bp
3292 O_BomoASG12964_internal:A_BomoASG_c27969_g1_i2
101bp
 protein_saal1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005615 C extracellular space
GO:0008150 P biological_process
3293 O_BomoASG12965_complete:A_BomoASG_c27969_g1_i3
428bp
 protein_saal1_[Bombyx_mori]
GO:0005615 C extracellular space
3294 O_BomoASG12966_complete:A_BomoASG_c27969_g1_i3
140bp
3295 O_BomoASG12967_complete:A_BomoASG_c27969_g1_i3
123bp
3296 O_BomoASG12968_5prime_partial:A_BomoASG_c27970_g1_i1
145bp
 phosphofurin_acidic_cluster_sorting_protein_1_isoform_X4_[Bombyx_mori]
GO:0005794 C Golgi apparatus
GO:0032092 P positive regulation of protein binding
GO:0034613 P cellular protein localization
GO:0044325 F transmembrane transporter binding
GO:0048471 C perinuclear region of cytoplasm
GO:0072661 P protein localization to plasma membrane
3297 O_BomoASG12969_5prime_partial:A_BomoASG_c27970_g1_i2
101bp
3298 O_BomoASG1296_5prime_partial:A_BomoASG_c7733_g1_i1
121bp
 myoneurin-like_[Helicoverpa_armigera]
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
3299 O_BomoASG12970_complete:A_BomoASG_c27971_g1_i1
442bp
 cryptochrome-1_[Helicoverpa_armigera]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0000989 F obsolete transcription factor activity, transcription factor binding
GO:0001046 F core promoter sequence-specific DNA binding
GO:0001047 F core promoter sequence-specific DNA binding
GO:0003690 F double-stranded DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006094 P gluconeogenesis
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006975 P DNA damage induced protein phosphorylation
GO:0007165 P signal transduction
GO:0007623 P circadian rhythm
GO:0008134 F transcription factor binding
GO:0009881 F photoreceptor activity
GO:0018298 P protein-chromophore linkage
GO:0019900 F kinase binding
GO:0019901 F protein kinase binding
GO:0019902 F phosphatase binding
GO:0019915 P lipid storage
GO:0031397 P negative regulation of protein ubiquitination
GO:0032868 P response to insulin
GO:0032922 P circadian regulation of gene expression
GO:0033762 P response to glucagon
GO:0035257 F nuclear receptor binding
GO:0042593 P glucose homeostasis
GO:0042752 P regulation of circadian rhythm
GO:0042754 P negative regulation of circadian rhythm
GO:0042826 F histone deacetylase binding
GO:0043130 F ubiquitin binding
GO:0043153 P entrainment of circadian clock by photoperiod
GO:0045744 P negative regulation of G protein-coupled receptor signaling pathway
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0048511 P rhythmic process
GO:0050896 P response to stimulus
GO:2000001 P regulation of DNA damage checkpoint
GO:2000323 P negative regulation of glucocorticoid receptor signaling pathway
GO:2000850 P negative regulation of glucocorticoid secretion
3300 O_BomoASG12971_5prime_partial:A_BomoASG_c27975_g1_i1
765bp
 uncharacterized_protein_LOC101745877_isoform_X2_[Bombyx_mori]
GO:0000976 F transcription cis-regulatory region binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0045893 P positive regulation of transcription, DNA-templated
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