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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3151 O_BomoASG12837_3prime_partial:A_BomoASG_c27893_g1_i1
183bp
 dihydrofolate_reductase_[Bombyx_mori]
GO:0004146 F dihydrofolate reductase activity
GO:0005575 C cellular_component
GO:0006545 P glycine biosynthetic process
GO:0006730 P one-carbon metabolic process
GO:0009165 P nucleotide biosynthetic process
GO:0016491 F oxidoreductase activity
GO:0046654 P tetrahydrofolate biosynthetic process
GO:0050661 F NADP binding
GO:0055114 P obsolete oxidation-reduction process
3152 O_BomoASG12838_complete:A_BomoASG_c27895_g1_i1
252bp
 ribosome_maturation_protein_SBDS_[Bombyx_mori]
GO:0000922 C spindle pole
GO:0001833 P inner cell mass cell proliferation
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006364 P rRNA processing
GO:0008017 F microtubule binding
GO:0008150 P biological_process
GO:0008283 P cell population proliferation
GO:0019843 F rRNA binding
GO:0030282 P bone mineralization
GO:0030595 P leukocyte chemotaxis
GO:0042254 P ribosome biogenesis
GO:0042256 P mature ribosome assembly
GO:0043022 F ribosome binding
GO:0044822 F RNA binding
GO:0048539 P bone marrow development
3153 O_BomoASG12839_5prime_partial:A_BomoASG_c27896_g1_i1
168bp
 zinc_transporter_2_[Bombyx_mori]
GO:0005385 F zinc ion transmembrane transporter activity
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006829 P zinc ion transport
GO:0008324 F cation transmembrane transporter activity
GO:0010008 C endosome membrane
GO:0010043 P response to zinc ion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0055085 P transmembrane transport
GO:0061088 P regulation of sequestering of zinc ion
GO:0071577 P zinc ion transmembrane transport
GO:0098655 P cation transmembrane transport
3154 O_BomoASG1283_3prime_partial:A_BomoASG_c7697_g1_i1
148bp
 mitochondrial_thioredoxin_2_[Bombyx_mori]
GO:0000103 P sulfate assimilation
GO:0001666 P response to hypoxia
GO:0005515 F protein binding
GO:0005730 C nucleolus
GO:0005739 C mitochondrion
GO:0006457 P protein folding
GO:0006662 P glycerol ether metabolic process
GO:0006979 P response to oxidative stress
GO:0007584 P response to nutrient
GO:0008113 F peptide-methionine (S)-S-oxide reductase activity
GO:0009725 P response to hormone
GO:0009749 P response to glucose
GO:0014070 P response to organic cyclic compound
GO:0015035 F protein-disulfide reductase activity
GO:0030425 C dendrite
GO:0031669 P cellular response to nutrient levels
GO:0032403 F protein-containing complex binding
GO:0033743 F peptide-methionine (R)-S-oxide reductase activity
GO:0034599 P cellular response to oxidative stress
GO:0042493 P response to xenobiotic stimulus
GO:0043025 C neuronal cell body
GO:0045454 P cell redox homeostasis
GO:0048678 P response to axon injury
GO:0055114 P obsolete oxidation-reduction process
3155 O_BomoASG12840_5prime_partial:A_BomoASG_c27896_g1_i1
121bp
3156 O_BomoASG12841_complete:A_BomoASG_c27896_g1_i1
120bp
3157 O_BomoASG12842_internal:A_BomoASG_c27896_g1_i2
131bp
3158 O_BomoASG12843_internal:A_BomoASG_c27896_g1_i2
131bp
3159 O_BomoASG12844_internal:A_BomoASG_c27896_g1_i2
131bp
 zinc_transporter_2_[Bombyx_mori]
GO:0005385 F zinc ion transmembrane transporter activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005770 C late endosome
GO:0005773 C vacuole
GO:0005774 C vacuolar membrane
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006829 P zinc ion transport
GO:0008324 F cation transmembrane transporter activity
GO:0010043 P response to zinc ion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0055085 P transmembrane transport
GO:0061090 P positive regulation of sequestering of zinc ion
GO:0071577 P zinc ion transmembrane transport
3160 O_BomoASG12845_complete:A_BomoASG_c27897_g1_i1
242bp
 ATP_synthase_mitochondrial_F1_complex_assembly_factor_2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0016607 C nuclear speck
GO:0043461 P proton-transporting ATP synthase complex assembly
3161 O_BomoASG12846_complete:A_BomoASG_c27897_g1_i2
276bp
 ATP_synthase_mitochondrial_F1_complex_assembly_factor_2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0016607 C nuclear speck
GO:0043461 P proton-transporting ATP synthase complex assembly
3162 O_BomoASG12847_complete:A_BomoASG_c27900_g1_i1
737bp
 protein_ENL_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007379 P segment specification
GO:0008023 C transcription elongation factor complex
GO:0009952 P anterior/posterior pattern specification
GO:0070062 C extracellular exosome
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:2000096 P positive regulation of Wnt signaling pathway, planar cell polarity pathway
3163 O_BomoASG12848_complete:A_BomoASG_c27901_g1_i1
256bp
 neuferricin_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005576 C extracellular region
GO:0008150 P biological_process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0020037 F heme binding
3164 O_BomoASG12849_complete:A_BomoASG_c27901_g1_i2
256bp
 neuferricin_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005576 C extracellular region
GO:0008150 P biological_process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0020037 F heme binding
3165 O_BomoASG1284_internal:A_BomoASG_c7703_g1_i1
138bp
3166 O_BomoASG12850_3prime_partial:A_BomoASG_c27902_g1_i1
1328bp
 phosphoribosylformylglycinamidine_synthase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004642 F phosphoribosylformylglycinamidine synthase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006164 P purine nucleotide biosynthetic process
GO:0006189 P 'de novo' IMP biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0009156 P ribonucleoside monophosphate biosynthetic process
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
3167 O_BomoASG12851_complete:A_BomoASG_c27907_g1_i1
214bp
 oxysterol-binding_protein-related_protein_11_[Bombyx_mori]
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0010890 P positive regulation of sequestering of triglyceride
GO:0016020 C membrane
GO:0031902 C late endosome membrane
GO:0045444 P fat cell differentiation
3168 O_BomoASG12852_complete:A_BomoASG_c27907_g1_i2
214bp
 oxysterol-binding_protein-related_protein_11_[Bombyx_mori]
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0010890 P positive regulation of sequestering of triglyceride
GO:0016020 C membrane
GO:0031902 C late endosome membrane
GO:0045444 P fat cell differentiation
3169 O_BomoASG12853_5prime_partial:A_BomoASG_c27907_g4_i1
134bp
 upstream_activation_factor_subunit_spp27_[Bombyx_mori]
GO:0000500 C RNA polymerase I upstream activating factor complex
GO:0001165 F RNA polymerase I cis-regulatory region sequence-specific DNA binding
GO:0001168 F obsolete transcription factor activity, RNA polymerase I upstream control element sequence-specific binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006325 P chromatin organization
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006356 P regulation of transcription by RNA polymerase I
GO:0042790 P nucleolar large rRNA transcription by RNA polymerase I
3170 O_BomoASG12854_5prime_partial:A_BomoASG_c27908_g1_i1
201bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101744503_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0008033 P tRNA processing
3171 O_BomoASG12855_5prime_partial:A_BomoASG_c27908_g1_i1
115bp
3172 O_BomoASG12856_internal:A_BomoASG_c27910_g1_i1
364bp
 hypothetical_protein_RR48_06329_[Papilio_machaon]
3173 O_BomoASG12857_complete:A_BomoASG_c27910_g1_i1
109bp
3174 O_BomoASG12858_complete:A_BomoASG_c27914_g1_i2
321bp
 LOW_QUALITY_PROTEIN:_protein_FAM76A_[Bombyx_mori]
GO:0004175 F endopeptidase activity
GO:0005634 C nucleus
GO:0016926 P protein desumoylation
GO:0016929 F SUMO-specific protease activity
3175 O_BomoASG12859_5prime_partial:A_BomoASG_c27914_g1_i4
237bp
 SCP-related_protein_precursor_[Bombyx_mori]
GO:0005576 C extracellular region
3176 O_BomoASG1285_internal:A_BomoASG_c7703_g1_i1
137bp
3177 O_BomoASG12860_complete:A_BomoASG_c27914_g1_i5
266bp
 LOW_QUALITY_PROTEIN:_protein_FAM76A_[Bombyx_mori]
GO:0004175 F endopeptidase activity
GO:0005634 C nucleus
GO:0016926 P protein desumoylation
GO:0016929 F SUMO-specific protease activity
3178 O_BomoASG12861_complete:A_BomoASG_c27914_g1_i5
160bp
 SCP-related_protein_precursor_[Bombyx_mori]
GO:0005539 F glycosaminoglycan binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0008201 F heparin binding
GO:0030133 C transport vesicle
GO:0030198 P extracellular matrix organization
GO:0030324 P lung development
GO:0060325 P face morphogenesis
GO:0070062 C extracellular exosome
3179 O_BomoASG12862_complete:A_BomoASG_c27915_g1_i1
150bp
 UDP-N-acetylglucosamine_transferase_subunit_ALG13_homolog_[Bombyx_mori]
GO:0004577 F N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
3180 O_BomoASG12863_complete:A_BomoASG_c27915_g1_i2
173bp
 UDP-N-acetylglucosamine_transferase_subunit_ALG13_homolog_[Bombyx_mori]
GO:0004577 F N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
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