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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3121 O_BomoASG1280_internal:A_BomoASG_c7668_g1_i1
145bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_E3_ubiquitin-protein_ligase_MYCBP2_[Amyelois_transitella]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006914 P autophagy
GO:0007616 P long-term memory
GO:0007628 P adult walking behavior
GO:0008270 F zinc ion binding
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0016023 C cytoplasmic vesicle
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030509 P BMP signaling pathway
GO:0030514 P negative regulation of BMP signaling pathway
GO:0040011 P locomotion
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0046872 F metal ion binding
GO:0048678 P response to axon injury
GO:0050808 P synapse organization
GO:2000331 P regulation of terminal button organization
3122 O_BomoASG12810_complete:A_BomoASG_c27869_g1_i2
182bp
 histone_deacetylase_complex_subunit_SAP30_homolog_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
3123 O_BomoASG12811_complete:A_BomoASG_c27869_g1_i4
182bp
 histone_deacetylase_complex_subunit_SAP30_homolog_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
3124 O_BomoASG12812_complete:A_BomoASG_c27870_g1_i1
354bp
 gamma-tubulin_complex_component_3_homolog_isoform_X2_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0000922 C spindle pole
GO:0000923 C equatorial microtubule organizing center
GO:0005200 F structural constituent of cytoskeleton
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005815 C microtubule organizing center
GO:0005816 C spindle pole body
GO:0005827 C polar microtubule
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007126 P meiotic cell cycle
GO:0008275 C gamma-tubulin small complex
GO:0016020 C membrane
GO:0031122 P cytoplasmic microtubule organization
GO:0043015 F gamma-tubulin binding
GO:0051011 F microtubule minus-end binding
GO:0051298 P centrosome duplication
GO:0051415 P microtubule nucleation by interphase microtubule organizing center
GO:0090063 P positive regulation of microtubule nucleation
GO:0090307 P mitotic spindle assembly
3125 O_BomoASG12813_complete:A_BomoASG_c27870_g1_i1
159bp
3126 O_BomoASG12814_complete:A_BomoASG_c27870_g1_i1
103bp
3127 O_BomoASG12815_5prime_partial:A_BomoASG_c27873_g2_i1
316bp
 protein_arginine_N-methyltransferase_3_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005840 C ribosome
GO:0006355 P regulation of transcription, DNA-templated
GO:0006479 P protein methylation
GO:0008168 F methyltransferase activity
GO:0008469 F histone-arginine N-methyltransferase activity
GO:0016274 F protein-arginine N-methyltransferase activity
GO:0016740 F transferase activity
GO:0019919 P peptidyl-arginine methylation, to asymmetrical-dimethyl arginine
GO:0031397 P negative regulation of protein ubiquitination
GO:0032259 P methylation
GO:0034969 P histone arginine methylation
GO:0035242 F protein-arginine omega-N asymmetric methyltransferase activity
GO:0035246 P peptidyl-arginine N-methylation
GO:0046872 F metal ion binding
3128 O_BomoASG12816_internal:A_BomoASG_c27874_g2_i1
121bp
 Uncharacterized_protein_OBRU01_19125_[Operophtera_brumata]
3129 O_BomoASG12817_5prime_partial:A_BomoASG_c27875_g1_i1
121bp
 PREDICTED:_gastrula_zinc_finger_protein_XlCGF26.1-like_isoform_X7_[Papilio_polytes]
3130 O_BomoASG12818_5prime_partial:A_BomoASG_c27877_g1_i2
146bp
 PREDICTED:_uncharacterized_protein_LOC103307937_[Acyrthosiphon_pisum]
3131 O_BomoASG12819_5prime_partial:A_BomoASG_c27881_g2_i1
213bp
 translation_initiation_factor_IF-2,_mitochondrial_isoform_X4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003743 F translation initiation factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0008135 F translation factor activity, RNA binding
GO:0032790 P ribosome disassembly
GO:0043024 F ribosomal small subunit binding
GO:0044822 F RNA binding
GO:0070124 P mitochondrial translational initiation
3132 O_BomoASG1281_internal:A_BomoASG_c7682_g1_i1
137bp
 uncharacterized_protein_LOC101738693_[Bombyx_mori]
3133 O_BomoASG12820_5prime_partial:A_BomoASG_c27881_g2_i1
157bp
3134 O_BomoASG12821_3prime_partial:A_BomoASG_c27881_g2_i1
118bp
3135 O_BomoASG12822_3prime_partial:A_BomoASG_c27882_g1_i1
286bp
 Uncharacterized_protein_OBRU01_09374_[Operophtera_brumata]
3136 O_BomoASG12823_complete:A_BomoASG_c27883_g1_i1
886bp
 DNA_ligase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0071897 P DNA biosynthetic process
3137 O_BomoASG12824_complete:A_BomoASG_c27883_g1_i1
311bp
3138 O_BomoASG12825_complete:A_BomoASG_c27883_g1_i2
843bp
 DNA_ligase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0071897 P DNA biosynthetic process
3139 O_BomoASG12826_complete:A_BomoASG_c27883_g1_i2
311bp
3140 O_BomoASG12827_5prime_partial:A_BomoASG_c27885_g1_i1
2243bp
 E3_SUMO-protein_ligase_RanBP2_[Bombyx_mori]
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0001975 P response to amphetamine
GO:0003723 F RNA binding
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005739 C mitochondrion
GO:0005875 C microtubule associated complex
GO:0006457 P protein folding
GO:0006607 P NLS-bearing protein import into nucleus
GO:0006810 P transport
GO:0008270 F zinc ion binding
GO:0008536 F small GTPase binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016874 F ligase activity
GO:0016925 P protein sumoylation
GO:0019789 F SUMO transferase activity
GO:0031965 C nuclear membrane
GO:0032403 F protein-containing complex binding
GO:0033132 P negative regulation of glucokinase activity
GO:0042405 C nuclear inclusion body
GO:0044614 C nuclear pore cytoplasmic filaments
GO:0044615 C nuclear pore nuclear basket
GO:0046872 F metal ion binding
GO:0046907 P intracellular transport
GO:0051028 P mRNA transport
GO:0090526 P regulation of gluconeogenesis
GO:1990723 C cytoplasmic periphery of the nuclear pore complex
3141 O_BomoASG12828_complete:A_BomoASG_c27885_g1_i1
130bp
3142 O_BomoASG12829_internal:A_BomoASG_c27887_g1_i1
448bp
 ankyrin_repeat_and_sterile_alpha_motif_domain-containing_protein_1B-like_isoform_X4_[Helicoverpa_armigera]
3143 O_BomoASG1282_3prime_partial:A_BomoASG_c7693_g1_i1
205bp
 glutamate_receptor_ionotropic,_NMDA_2B_[Bombyx_mori]
3144 O_BomoASG12830_internal:A_BomoASG_c27890_g1_i1
505bp
 ORF2_[Bombyx_mori]
3145 O_BomoASG12831_complete:A_BomoASG_c27891_g1_i1
154bp
 mitochondrial_inner_membrane_protease_subunit_1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004252 F serine-type endopeptidase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006465 P signal peptide processing
GO:0006508 P proteolysis
GO:0006627 P protein processing involved in protein targeting to mitochondrion
GO:0008150 P biological_process
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0033108 P mitochondrial respiratory chain complex assembly
GO:0042720 C mitochondrial inner membrane peptidase complex
3146 O_BomoASG12832_complete:A_BomoASG_c27892_g1_i1
472bp
 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase_isoform_X4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0003873 F 6-phosphofructo-2-kinase activity
GO:0004331 F fructose-2,6-bisphosphate 2-phosphatase activity
GO:0005524 F ATP binding
GO:0006000 P fructose metabolic process
GO:0006003 P fructose 2,6-bisphosphate metabolic process
GO:0008152 P metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016311 P dephosphorylation
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0046835 P carbohydrate phosphorylation
3147 O_BomoASG12833_complete:A_BomoASG_c27892_g1_i1
292bp
3148 O_BomoASG12834_complete:A_BomoASG_c27892_g1_i1
108bp
3149 O_BomoASG12835_complete:A_BomoASG_c27892_g1_i2
454bp
 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0003873 F 6-phosphofructo-2-kinase activity
GO:0004331 F fructose-2,6-bisphosphate 2-phosphatase activity
GO:0005524 F ATP binding
GO:0006000 P fructose metabolic process
GO:0006003 P fructose 2,6-bisphosphate metabolic process
GO:0008152 P metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016311 P dephosphorylation
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0046835 P carbohydrate phosphorylation
3150 O_BomoASG12836_complete:A_BomoASG_c27892_g1_i2
108bp
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