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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3181 O_BomoASG12864_internal:A_BomoASG_c27917_g1_i1
232bp
 verprolin_isoform_X3_[Bombyx_mori]
GO:0001105 F transcription coactivator activity
GO:0001701 P in utero embryonic development
GO:0001764 P neuron migration
GO:0001889 P liver development
GO:0003007 P heart morphogenesis
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007507 P heart development
GO:0007517 P muscle organ development
GO:0010467 P gene expression
GO:0010468 P regulation of gene expression
GO:0030036 P actin cytoskeleton organization
GO:0030154 P cell differentiation
GO:0030900 P forebrain development
GO:0031175 P neuron projection development
GO:0045844 P positive regulation of striated muscle tissue development
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048514 P blood vessel morphogenesis
GO:0048568 P embryonic organ development
GO:0048738 P cardiac muscle tissue development
GO:0051145 P smooth muscle cell differentiation
3182 O_BomoASG12865_internal:A_BomoASG_c27917_g1_i2
222bp
 verprolin_isoform_X3_[Bombyx_mori]
GO:0001105 F transcription coactivator activity
GO:0001701 P in utero embryonic development
GO:0001764 P neuron migration
GO:0001889 P liver development
GO:0003007 P heart morphogenesis
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007507 P heart development
GO:0007517 P muscle organ development
GO:0010467 P gene expression
GO:0010468 P regulation of gene expression
GO:0030036 P actin cytoskeleton organization
GO:0030154 P cell differentiation
GO:0030900 P forebrain development
GO:0031175 P neuron projection development
GO:0045844 P positive regulation of striated muscle tissue development
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048514 P blood vessel morphogenesis
GO:0048568 P embryonic organ development
GO:0048738 P cardiac muscle tissue development
GO:0051145 P smooth muscle cell differentiation
3183 O_BomoASG12866_5prime_partial:A_BomoASG_c27919_g1_i3
156bp
 U4/U6.U5_tri-snRNP-associated_protein_1_isoform_X2_[Bombyx_mori]
GO:0000387 P spliceosomal snRNP assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0000481 P maturation of 5S rRNA
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006397 P mRNA processing
GO:0007050 P regulation of cell cycle
GO:0008380 P RNA splicing
GO:0015030 C Cajal body
GO:0044822 F RNA binding
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0045585 P positive regulation of cytotoxic T cell differentiation
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0071013 C catalytic step 2 spliceosome
GO:0097193 P intrinsic apoptotic signaling pathway
3184 O_BomoASG12867_5prime_partial:A_BomoASG_c27919_g1_i3
151bp
3185 O_BomoASG12868_complete:A_BomoASG_c27920_g1_i2
223bp
 uncharacterized_protein_LOC101741905_isoform_X2_[Bombyx_mori]
3186 O_BomoASG12869_5prime_partial:A_BomoASG_c27920_g1_i2
122bp
3187 O_BomoASG1286_internal:A_BomoASG_c7703_g1_i1
137bp
3188 O_BomoASG12870_3prime_partial:A_BomoASG_c27920_g1_i2
103bp
3189 O_BomoASG12871_3prime_partial:A_BomoASG_c27923_g1_i1
334bp
 neurogenic_protein_mastermind_[Bombyx_mori]
GO:0003007 P heart morphogenesis
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005703 C polytene chromosome puff
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007398 P ectoderm development
GO:0007399 P nervous system development
GO:0007418 P ventral midline development
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007500 P mesodermal cell fate determination
GO:0008356 P asymmetric cell division
GO:0008407 P chaeta morphogenesis
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0016607 C nuclear speck
GO:0030154 P cell differentiation
GO:0030707 P ovarian follicle cell development
GO:0030718 P germ-line stem cell population maintenance
GO:0035019 P somatic stem cell population maintenance
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048749 P compound eye development
3190 O_BomoASG12872_complete:A_BomoASG_c27923_g1_i1
116bp
3191 O_BomoASG12873_internal:A_BomoASG_c27923_g1_i2
113bp
 neurogenic_protein_mastermind_[Bombyx_mori]
3192 O_BomoASG12874_internal:A_BomoASG_c27925_g1_i1
237bp
 probable_Rho_GTPase-activating_protein_CG5521_isoform_X2_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
3193 O_BomoASG12875_3prime_partial:A_BomoASG_c27925_g1_i2
427bp
 probable_Rho_GTPase-activating_protein_CG5521_isoform_X1_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
3194 O_BomoASG12876_internal:A_BomoASG_c27926_g2_i1
340bp
 unconventional_myosin-IXa_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005096 F GTPase activator activity
GO:0005524 F ATP binding
GO:0007165 P signal transduction
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016459 C myosin complex
GO:0035556 P intracellular signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
3195 O_BomoASG12877_internal:A_BomoASG_c27926_g1_i2
245bp
 unconventional_myosin-IXa_isoform_X4_[Bombyx_mori]
3196 O_BomoASG12878_5prime_partial:A_BomoASG_c27929_g1_i1
328bp
 kinase_suppressor_of_Ras_2_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
3197 O_BomoASG12879_5prime_partial:A_BomoASG_c27929_g1_i2
386bp
 kinase_suppressor_of_Ras_2_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
3198 O_BomoASG1287_internal:A_BomoASG_c7703_g1_i1
137bp
 uncharacterized_protein_LOC110384749_[Bombyx_mori]
3199 O_BomoASG12880_3prime_partial:A_BomoASG_c27929_g1_i2
140bp
3200 O_BomoASG12881_complete:A_BomoASG_c27931_g1_i1
614bp
 putative_ammonium_transporter_2_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0008519 F ammonium transmembrane transporter activity
GO:0015695 P organic cation transport
GO:0015696 P ammonium transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019740 P nitrogen utilization
GO:0072488 P ammonium transmembrane transport
3201 O_BomoASG12882_complete:A_BomoASG_c27931_g1_i1
321bp
 hypothetical_protein_WN51_02880_[Melipona_quadrifasciata]
3202 O_BomoASG12883_complete:A_BomoASG_c27931_g1_i2
614bp
 putative_ammonium_transporter_2_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0008519 F ammonium transmembrane transporter activity
GO:0015695 P organic cation transport
GO:0015696 P ammonium transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019740 P nitrogen utilization
GO:0072488 P ammonium transmembrane transport
3203 O_BomoASG12884_complete:A_BomoASG_c27931_g1_i2
321bp
 hypothetical_protein_WN51_02880_[Melipona_quadrifasciata]
3204 O_BomoASG12885_complete:A_BomoASG_c27932_g1_i1
156bp
3205 O_BomoASG12886_5prime_partial:A_BomoASG_c27932_g1_i1
117bp
 pecanex-like_protein_1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
3206 O_BomoASG12887_internal:A_BomoASG_c27933_g1_i1
166bp
 macrophage_erythroblast_attacher_isoform_X1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007049 P cell cycle
GO:0016020 C membrane
GO:0016363 C nuclear matrix
GO:0043249 P erythrocyte maturation
GO:0051301 P cell division
3207 O_BomoASG12888_5prime_partial:A_BomoASG_c27933_g1_i1
135bp
3208 O_BomoASG12889_3prime_partial:A_BomoASG_c27933_g1_i2
257bp
 macrophage_erythroblast_attacher_isoform_X1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007049 P cell cycle
GO:0016020 C membrane
GO:0016363 C nuclear matrix
GO:0043249 P erythrocyte maturation
GO:0051301 P cell division
3209 O_BomoASG1288_5prime_partial:A_BomoASG_c7705_g1_i1
105bp
3210 O_BomoASG12890_5prime_partial:A_BomoASG_c27933_g1_i2
135bp
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