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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3091 O_BomoASG12783_complete:A_BomoASG_c27830_g1_i2
112bp
 YY1-associated_factor_2_[Helicoverpa_armigera]
GO:0003713 F transcription coactivator activity
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
3092 O_BomoASG12784_complete:A_BomoASG_c27833_g1_i1
308bp
 LOW_QUALITY_PROTEIN:_latrophilin_Cirl_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030246 F carbohydrate binding
3093 O_BomoASG12785_5prime_partial:A_BomoASG_c27833_g1_i1
144bp
 LOW_QUALITY_PROTEIN:_latrophilin_Cirl_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030246 F carbohydrate binding
3094 O_BomoASG12786_complete:A_BomoASG_c27833_g1_i2
344bp
 LOW_QUALITY_PROTEIN:_latrophilin_Cirl_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030246 F carbohydrate binding
3095 O_BomoASG12787_5prime_partial:A_BomoASG_c27833_g1_i2
144bp
 LOW_QUALITY_PROTEIN:_latrophilin_Cirl_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030246 F carbohydrate binding
3096 O_BomoASG12788_internal:A_BomoASG_c27838_g1_i1
340bp
 probable_ATP-dependent_RNA_helicase_DHX34_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006396 P RNA processing
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:2000623 P negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
3097 O_BomoASG12789_complete:A_BomoASG_c27839_g1_i1
332bp
 ATP-binding_cassette_sub-family_B_member_10,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0032592 C integral component of mitochondrial membrane
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0042803 F protein homodimerization activity
GO:0055085 P transmembrane transport
3098 O_BomoASG1278_internal:A_BomoASG_c7657_g1_i1
130bp
3099 O_BomoASG12790_complete:A_BomoASG_c27839_g1_i2
698bp
 ATP-binding_cassette_sub-family_B_member_10,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0032592 C integral component of mitochondrial membrane
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0042803 F protein homodimerization activity
GO:0055085 P transmembrane transport
3100 O_BomoASG12791_complete:A_BomoASG_c27840_g1_i2
280bp
 uncharacterized_protein_LOC101742413_isoform_X2_[Bombyx_mori]
3101 O_BomoASG12792_5prime_partial:A_BomoASG_c27844_g1_i1
192bp
 uncharacterized_protein_LOC101737957_[Bombyx_mori]
3102 O_BomoASG12793_5prime_partial:A_BomoASG_c27844_g1_i2
140bp
 uncharacterized_protein_LOC101737957_[Bombyx_mori]
3103 O_BomoASG12794_complete:A_BomoASG_c27844_g1_i3
247bp
 uncharacterized_protein_LOC101737957_[Bombyx_mori]
3104 O_BomoASG12795_3prime_partial:A_BomoASG_c27846_g1_i1
341bp
 zinc_finger_protein_239-like,_partial_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
3105 O_BomoASG12796_internal:A_BomoASG_c27846_g2_i1
165bp
 zinc_finger_protein_239-like,_partial_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0046872 F metal ion binding
3106 O_BomoASG12797_5prime_partial:A_BomoASG_c27852_g1_i1
194bp
 cysteine_protease_ATG4D_isoform_X1_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000422 P autophagy of mitochondrion
GO:0004197 F cysteine-type endopeptidase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005829 C cytosol
GO:0006501 P C-terminal protein lipidation
GO:0006508 P proteolysis
GO:0006612 P protein targeting to membrane
GO:0006810 P transport
GO:0006914 P autophagy
GO:0006915 P apoptotic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0015031 P protein transport
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0044804 P autophagy of nucleus
GO:0051697 P protein delipidation
3107 O_BomoASG12798_5prime_partial:A_BomoASG_c27852_g1_i2
244bp
 cysteine_protease_ATG4D_isoform_X1_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000422 P autophagy of mitochondrion
GO:0004197 F cysteine-type endopeptidase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005829 C cytosol
GO:0006501 P C-terminal protein lipidation
GO:0006508 P proteolysis
GO:0006612 P protein targeting to membrane
GO:0006810 P transport
GO:0006914 P autophagy
GO:0006915 P apoptotic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0015031 P protein transport
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0044804 P autophagy of nucleus
GO:0051697 P protein delipidation
3108 O_BomoASG12799_3prime_partial:A_BomoASG_c27853_g1_i2
143bp
 RNA-binding_protein_fusilli-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0008380 P RNA splicing
GO:0043484 P regulation of RNA splicing
3109 O_BomoASG1279_internal:A_BomoASG_c7657_g1_i1
129bp
 PREDICTED:_uncharacterized_protein_LOC103573846,_partial_[Microplitis_demolitor]
3110 O_BomoASG127_internal:A_BomoASG_c839_g1_i1
118bp
3111 O_BomoASG12800_complete:A_BomoASG_c27855_g1_i1
193bp
 actin-binding_Rho-activating_protein_[Bombyx_mori]
GO:0000060 P obsolete protein import into nucleus, translocation
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
GO:0015031 P protein transport
GO:0015629 C actin cytoskeleton
GO:0030016 C myofibril
GO:0030017 C sarcomere
GO:0035025 P positive regulation of Rho protein signal transduction
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051091 P positive regulation of DNA-binding transcription factor activity
3112 O_BomoASG12801_complete:A_BomoASG_c27863_g2_i1
128bp
 uncharacterized_protein_LOC110369816_[Helicoverpa_armigera]
3113 O_BomoASG12802_internal:A_BomoASG_c27865_g1_i1
174bp
 protein_ST7_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
3114 O_BomoASG12803_3prime_partial:A_BomoASG_c27865_g1_i1
104bp
3115 O_BomoASG12804_internal:A_BomoASG_c27865_g2_i1
103bp
 protein_ST7_homolog_[Bombyx_mori]
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
3116 O_BomoASG12805_3prime_partial:A_BomoASG_c27865_g2_i2
215bp
 protein_ST7_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
3117 O_BomoASG12806_3prime_partial:A_BomoASG_c27867_g1_i1
241bp
 uncharacterized_protein_LOC110386593_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0005737 C cytoplasm
GO:0006401 P RNA catabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
3118 O_BomoASG12807_complete:A_BomoASG_c27867_g1_i1
114bp
3119 O_BomoASG12808_internal:A_BomoASG_c27867_g2_i1
452bp
 ORF2_[Bombyx_mori]
3120 O_BomoASG12809_5prime_partial:A_BomoASG_c27867_g2_i1
111bp
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