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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3061 O_BomoASG12756_5prime_partial:A_BomoASG_c27809_g1_i3
115bp
3062 O_BomoASG12757_5prime_partial:A_BomoASG_c27810_g1_i1
304bp
 PREDICTED:_SCAN_domain-containing_protein_3-like_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
GO:0006355 P regulation of transcription, DNA-templated
GO:0015074 P DNA integration
3063 O_BomoASG12758_3prime_partial:A_BomoASG_c27814_g1_i1
187bp
 death_related_ced-3/Nedd2-like_protein_[Bombyx_mori]
GO:0002230 P positive regulation of defense response to virus by host
GO:0002376 P immune system process
GO:0004175 F endopeptidase activity
GO:0004197 F cysteine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0006952 P defense response
GO:0006955 P immune response
GO:0006963 P positive regulation of antibacterial peptide biosynthetic process
GO:0006964 P positive regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria
GO:0007291 P sperm individualization
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008656 F cysteine-type endopeptidase activator activity involved in apoptotic process
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0043069 P negative regulation of programmed cell death
GO:0045087 P innate immune response
GO:0045089 P positive regulation of innate immune response
GO:0048935 P peripheral nervous system neuron development
GO:0050829 P defense response to Gram-negative bacterium
GO:0061057 P peptidoglycan recognition protein signaling pathway
GO:0097194 P execution phase of apoptosis
GO:0097200 F cysteine-type endopeptidase activity involved in execution phase of apoptosis
3064 O_BomoASG12759_internal:A_BomoASG_c27815_g1_i1
696bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Plutella_xylostella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
3065 O_BomoASG1275_internal:A_BomoASG_c7643_g1_i1
131bp
3066 O_BomoASG12760_complete:A_BomoASG_c27815_g1_i1
137bp
3067 O_BomoASG12761_complete:A_BomoASG_c27815_g1_i1
105bp
3068 O_BomoASG12762_internal:A_BomoASG_c27820_g1_i1
358bp
3069 O_BomoASG12763_internal:A_BomoASG_c27820_g1_i2
116bp
3070 O_BomoASG12764_3prime_partial:A_BomoASG_c27823_g1_i1
112bp
 tetratricopeptide_repeat_protein_21B_[Bombyx_mori]
GO:0000790 C chromatin
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007224 P smoothened signaling pathway
GO:0008589 P regulation of smoothened signaling pathway
GO:0021591 P ventricular system development
GO:0021798 P forebrain dorsal/ventral pattern formation
GO:0030991 C intraciliary transport particle A
GO:0035721 P intraciliary retrograde transport
GO:0035735 P intraciliary transport involved in cilium assembly
GO:0042995 C cell projection
GO:0060271 P cilium assembly
GO:0061512 P protein localization to cilium
3071 O_BomoASG12765_complete:A_BomoASG_c27823_g1_i1
111bp
 PREDICTED:_protein_NATD1_[Amyelois_transitella]
3072 O_BomoASG12766_internal:A_BomoASG_c27825_g1_i1
515bp
 putative_transcription_factor_capicua_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0048286 P lung alveolus development
3073 O_BomoASG12767_5prime_partial:A_BomoASG_c27826_g1_i1
658bp
 AF4/FMR2_family_member_3-like_isoform_X2_[Helicoverpa_armigera]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007366 P periodic partitioning by pair rule gene
GO:0008361 P regulation of cell size
GO:0032368 P regulation of lipid transport
GO:0042051 P compound eye photoreceptor development
GO:0051493 P regulation of cytoskeleton organization
3074 O_BomoASG12768_complete:A_BomoASG_c27826_g1_i1
180bp
3075 O_BomoASG12769_complete:A_BomoASG_c27826_g1_i1
138bp
3076 O_BomoASG1276_internal:A_BomoASG_c7650_g1_i1
219bp
 exportin-7,_partial_[Bombyx_mori]
GO:0005049 F nuclear export signal receptor activity
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005737 C cytoplasm
GO:0006611 P protein export from nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008536 F small GTPase binding
GO:0015031 P protein transport
3077 O_BomoASG12770_complete:A_BomoASG_c27826_g1_i1
131bp
3078 O_BomoASG12771_complete:A_BomoASG_c27826_g1_i1
125bp
3079 O_BomoASG12772_complete:A_BomoASG_c27826_g1_i1
103bp
3080 O_BomoASG12773_3prime_partial:A_BomoASG_c27828_g1_i1
176bp
 protein_fem-1_homolog_CG6966_isoform_X1_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005575 C cellular_component
GO:0016567 P protein ubiquitination
GO:0051438 P regulation of ubiquitin-protein transferase activity
3081 O_BomoASG12774_internal:A_BomoASG_c27828_g2_i1
213bp
 protein_fem-1_homolog_CG6966_isoform_X3_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005575 C cellular_component
GO:0016567 P protein ubiquitination
GO:0051438 P regulation of ubiquitin-protein transferase activity
3082 O_BomoASG12775_internal:A_BomoASG_c27828_g1_i2
145bp
 protein_fem-1_homolog_CG6966_isoform_X2_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005575 C cellular_component
GO:0016567 P protein ubiquitination
GO:0051438 P regulation of ubiquitin-protein transferase activity
3083 O_BomoASG12776_internal:A_BomoASG_c27828_g2_i2
187bp
 protein_fem-1_homolog_CG6966_isoform_X3_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005575 C cellular_component
GO:0016567 P protein ubiquitination
GO:0051438 P regulation of ubiquitin-protein transferase activity
3084 O_BomoASG12777_5prime_partial:A_BomoASG_c27829_g1_i1
109bp
3085 O_BomoASG12778_5prime_partial:A_BomoASG_c27830_g1_i1
148bp
3086 O_BomoASG12779_complete:A_BomoASG_c27830_g1_i1
140bp
 ring_and_YY1_binding_protein_[Bombyx_mori]
GO:0003713 F transcription coactivator activity
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
3087 O_BomoASG1277_5prime_partial:A_BomoASG_c7650_g1_i1
136bp
3088 O_BomoASG12780_complete:A_BomoASG_c27830_g1_i1
102bp
3089 O_BomoASG12781_complete:A_BomoASG_c27830_g1_i2
131bp
3090 O_BomoASG12782_5prime_partial:A_BomoASG_c27830_g1_i2
124bp
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